Beta-lactamase 3D structures: Difference between revisions

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**[[1zkj]], [[5f1f]], [[5k1d]], [[5gsc]] – EaBlac C – ''Enterobacter aerogenes''<br />
**[[1zkj]], [[5f1f]], [[5k1d]], [[5gsc]] – EaBlac C – ''Enterobacter aerogenes''<br />
**[[2qz6]] – Blac C – ''Pseudomonas fluorescens''<br />
**[[2qz6]] – Blac C – ''Pseudomonas fluorescens''<br />
**[[3w8k]] – KpBlac C<br />
**[[3w8k]], [[6k8x]] – KpBlac C<br />
**[[4u0t]] – AbBlac C Adc-7<br />
**[[4u0t]] – AbBlac C Adc-7<br />
**[[4qd4]] – AbBlac C Adc-68<br />
**[[4qd4]] – AbBlac C Adc-68<br />
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*β-lactamase class C binary complex
*β-lactamase class C binary complex


**[[3gqz]], [[3gr2]], [[3grj]], [[3gsg]], [[3gtc]], [[3gv9]], [[3gvb]], [[6wa7]] - EcBlac C + inhibitor<br />
**[[3bm6]], [[3fkv]], [[3o86]], [[3o87]], [[3o88]] – EcBlac C + boronic acid inhibitor<br />
**[[3bm6]], [[3fkv]], [[3o86]], [[3o87]], [[3o88]] – EcBlac C + boronic acid inhibitor<br />
**[[3ixb]], [[3ixg]] - EcBlac C (mutant) + boronic acid inhibitor<br />  
**[[3ixb]], [[3ixg]] - EcBlac C (mutant) + boronic acid inhibitor<br />
**[[3ixh]] - EcBlac C (mutant) + cefotaxime<br />
**[[6whf]] - EcBlac C + antibiotic<br />  
**[[3gqz]], [[3gr2]], [[3grj]], [[3gsg]], [[3gtc]], [[3gv9]], [[3gvb]] - EcBlac C + inhibitor<br />
**[[3ixh]] - EcBlac C (mutant) + antibiotic<br />
**[[1onh]], [[1q2q]], [[1y54]] - EncBlac C + inhibitor<br />  
**[[1onh]], [[1q2q]], [[1y54]] - EncBlac C + inhibitor<br />  
**[[1s6r]] - EncBlac C+ boronic acid inhibitor<br />
**[[1s6r]] - EncBlac C+ boronic acid inhibitor<br />
**[[1rgz]], [[5xhr]] - EncBlac C + antibiotic<br />
**[[1rgz]], [[5xhr]] - EncBlac C + antibiotic<br />
**[1rgy]] - CfBlac C + antibiotic <br />
**[1rgy]] - CfBlac C + antibiotic <br />
**[[1zc2]], [[2zc7]] – KpBlac C + inhibitor<br />
**[[1zc2]], [[2zc7]], [[6k9t]], [[6ka5]] – KpBlac C + inhibitor<br />
**[[4wbg]] - KpBlac C + antibiotic<br />
**[[4wbg]] - KpBlac C + antibiotic<br />
**[[6kby]] - KpBlac C + AMP<br />
**[[2wzx]], [[2wzz]], [[6i30]] – PaBlac C + inhibitor<br />
**[[2wzx]], [[2wzz]], [[6i30]] – PaBlac C + inhibitor<br />
**[[4ooy]] - PaBlac C + antibiotic<br />
**[[4ooy]] - PaBlac C + antibiotic<br />
**[[4u0x]], [[5wac]], [[5wad]], [[5wae]], [[5waf]], [[5wag]], [[5w12]], [[5w13]], [[5w14]] - AbBlac C Adc-7 + boronic acid inhibitor <br />
**[[4u0x]], [[5wac]], [[5wad]], [[5wae]], [[5waf]], [[5wag]], [[5w12]], [[5w13]], [[5w14]], [[6wif]] - AbBlac C Adc-7 + boronic acid inhibitor <br />
**[[6fm7]]  - AeBlac C Tru-1 + inhibitor <br />
**[[6fm7]]  - AeBlac C Tru-1 + inhibitor <br />
**[[5k1f]]  - EaBlac C + inhibitor <br />
**[[5k1f]]  - EaBlac C + inhibitor <br />
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**[[1k38]] – Blac D – ''Salmonella typhimurium''<br />
**[[1k38]] – Blac D – ''Salmonella typhimurium''<br />
**[[1m6k]] – EcBlac D<br />
**[[1m6k]] – EcBlac D<br />
**[[3if6]], [[4s2p]] - KpBlac D Oxa-46<br />
**[[3hbr]] – KpBlac D Oxa-48<br />
**[[3hbr]] – KpBlac D Oxa-48<br />
**[[3if6]], [[4s2p]] - KpBlac D Oxa-46<br />
**[[6i5d]], [[6rj7]] - KpBlac D Oxa-48 (mutant)<br />
**[[6huh]] - KpBlac D Oxa-427<br />
**[[6hb8]] - KpBlac D Oxa-517<br />
**[[6n6w]], [[6n6t]] - AbBlac D Oxa-23 (mutant)<br />
**[[6n6w]], [[6n6t]] - AbBlac D Oxa-23 (mutant)<br />
**[[4zdx]] - AbBlac D Oxa-51<br />
**[[4zdx]] - AbBlac D Oxa-51<br />
**[[4y0o]] - AbBlac D Oxa-58<br />
**[[4y0o]] - AbBlac D Oxa-58<br />
**[[6nz8]] - AbBlac D Oxa-231<br />
**[[4s2l]], [[5odz]] - EncBlac D Oxa-163<br />
**[[4s2l]], [[5odz]] - EncBlac D Oxa-163<br />
**[[5e2f]] – BsBlac D <br />
**[[5e2f]] – BsBlac D <br />
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**[[6ni0]] – BtBlac D <br />
**[[6ni0]] – BtBlac D <br />
**[[6n1n]] – Blac D – ''Sebaldella termitidis''<br />
**[[6n1n]] – Blac D – ''Sebaldella termitidis''<br />
**[[6ue2]] – Blac D – ''Peptoclostridium difficile''<br />
**[[6wy4]] – CdBlac D – ''Clostridium difficile''<br />


*β-lactamase class D binary complex
*β-lactamase class D binary complex
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**[[6mpq]], [[6b22]] - AbBlac D Oxa-24 + inhibitor<br />
**[[6mpq]], [[6b22]] - AbBlac D Oxa-24 + inhibitor<br />
**[[5vfd]] - AbBlac D Oxa-24 (mutant) + inhibitor<br />
**[[5vfd]] - AbBlac D Oxa-24 (mutant) + inhibitor<br />
**[[5fat]], [[5fas]], [[5faq]], [[5fap]], [[5fao]], [[5dva]], [[5dtt]], [[5dts]], [[5dtk]], [[5qa4]], [[5qa5]], [[5qa6]], [[5qa7]], [[5qa8]], [[5qa9]], [[5qaa]], [[5qab]], [[5qac]], [[5qad]], [[5qae]], [[5qaf]], [[5qag]], [[5qah]], [[5qai]], [[5qaj]], [[5qak]], [[5qal]], [[5qam]], [[5qan]], [[5qao]], [[5qap]], [[5qaq]], [[5qar]], [[5qas]], [[5qat]], [[5qau]], [[5qav]], [[5qaw]], [[5qax]], [[5qay]], [[5qaz]], [[5qb0]], [[5qb1]], [[5qb2]], [[5qb3]], [[5qb4]] - KpBlac D Oxa-48 + inhibitor<br />
**[[5fat]], [[5fas]], [[5faq]], [[5fap]], [[5fao]], [[5dva]], [[5dtt]], [[5dts]], [[5dtk]], [[5qa4]], [[5qa5]], [[5qa6]], [[5qa7]], [[5qa8]], [[5qa9]], [[5qaa]], [[5qab]], [[5qac]], [[5qad]], [[5qae]], [[5qaf]], [[5qag]], [[5qah]], [[5qai]], [[5qaj]], [[5qak]], [[5qal]], [[5qam]], [[5qan]], [[5qao]], [[5qap]], [[5qaq]], [[5qar]], [[5qas]], [[5qat]], [[5qau]], [[5qav]], [[5qaw]], [[5qax]], [[5qay]], [[5qaz]], [[5qb0]], [[5qb1]], [[5qb2]], [[5qb3]], [[5qb4]], [[6uvk]], [[6v1o]] - KpBlac D Oxa-48 + inhibitor<br />


*β-lactamase class D binary complex with antibiotics
*β-lactamase class D binary complex with antibiotics
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**[[4x55]] - AbBlac D Oxa-225 (mutant) + antibiotic<br />
**[[4x55]] - AbBlac D Oxa-225 (mutant) + antibiotic<br />
**[[4mll]] - KpBlac D Oxa-1 + antibiotic<br />
**[[4mll]] - KpBlac D Oxa-1 + antibiotic<br />
**[[4s2j]], [[4s2k]], [[4s2n]], [[4wmc]] - KpBlac D Oxa-48 + antibiotic<br />
**[[4s2j]], [[4s2k]], [[4s2n]], [[4wmc]], [[6pqi]], [[6psg]], [[6pt1]], [[6pt5]], [[6ptu]] - KpBlac D Oxa-48 + antibiotic<br />
**[[6pxx]] - KpBlac D Oxa-48 (mutant) + antibiotic<br />


*'''AmpC β-lactamase'''
*'''AmpC β-lactamase'''
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**[[4jxg]] – EcBlac + oxacillin<br />
**[[4jxg]] – EcBlac + oxacillin<br />
**[[1o07]], [[4kz9]] - EcBlac (mutant) + inhibitor<br />
**[[1o07]], [[4kz9]] - EcBlac (mutant) + inhibitor<br />
**[[6lc7]] - EncBlac <br />
**[[6lc8]], [[6lc9]]  - EncBlac + inhibitor<br />
**[[4xux]]  - EncBlac + boronic acid inhibitor<br />
**[[4xux]]  - EncBlac + boronic acid inhibitor<br />
**[[4hef]], [[4nk3]], [[4x68]] - PaBlac + inhibitor<br />
**[[3s1y]], [[3s22]] - PaBlac (mutant) + inhibitor<br />
**[[3s1y]], [[3s22]] - PaBlac (mutant) + inhibitor<br />
**[[4hef]], [[4nk3]], [[4x68]] - PaBlac + inhibitor<br />
**[[6s1s]] - PaBlac + boronic acid inhibitor<br />
**[[4gzb]], [[4wz4]], [[4wyy]] – PaBlac<br />
**[[4gzb]], [[4wz4]], [[4wyy]] – PaBlac<br />
**[[4net]] – AbBlac<br />
**[[4net]] – AbBlac<br />
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**[[3f9o]] - AhBlac B – ''Aeromonas hydrophila''<br />
**[[3f9o]] - AhBlac B – ''Aeromonas hydrophila''<br />
**[[3fai]], [[1x8h]], [[3sw3]], [[3t9m]] - AhBlac B (mutant)<br />
**[[3fai]], [[1x8h]], [[3sw3]], [[3t9m]] - AhBlac B (mutant)<br />
**[[6p96]] - KpBlac Oxa-48 <br />
**[[6p97]], [[6p98]], [[6p99]], [[6p9c]], [[6pk0]] - KpBlac Oxa-48 + antibiotic<br />
**[[3rxw]], [[3rxx]], [[2ov5]], [[5ul8]] – KpBlac Kpc<br />
**[[3rxw]], [[3rxx]], [[2ov5]], [[5ul8]] – KpBlac Kpc<br />
**[[5eec]] - KpBlac Kpc-2 + boronic acid inhibitor<br />
**[[5eec]], [[6td1]] - KpBlac Kpc-2 + boronic acid inhibitor<br />
**[[4zbe]], [[6b1y]], [[6b1x]], [[6b1w]], [[6b1j]], [[6b1h]], [[6b1f]] - KpBlac Kpc-2 + inhibitor<br />
**[[4zbe]], [[6b1y]], [[6b1x]], [[6b1w]], [[6b1j]], [[6b1h]], [[6b1f]], [[6d15]], [[6d16]], [[6d17]], [[6d18]], [[6d19]], [[6j8q]], [[6jn3]], [[6jn4]], [[6jn5]], [[6m7i]], [[6mey]], [[6mll]], [[6mnp]], [[6qw9]], [[6td0]], [[6v1j]] - KpBlac Kpc-2 + inhibitor<br />
**[[5uj3]], [[5uj4]] - KpBlac Kpc-2 + antibiotic<br />
**[[5uj3]], [[5uj4]] - KpBlac Kpc-2 + antibiotic<br />
**[[5mgi]] - KoBlac Kpc-2 + boronic acid inhibitor - ''Klebsiella oxytoca'' <br />
**[[5mgi]] - KoBlac Kpc-2 + boronic acid inhibitor - ''Klebsiella oxytoca'' <br />
**[[6qwd]] - KpBlac Kpc-3<br />
**[[6qwa]] - KpBlac Kpc-3 + inhibitor<br />
**[[6qwe]] - KpBlac Kpc-4<br />
**[[6qwb]], [[6qwc]] - KpBlac Kpc-4 + inhibitor<br />
**[[4eqi]] – SfBlac Sfc-1<br />
**[[4eqi]] – SfBlac Sfc-1<br />
**[[4euz]], [[4ev4]] – SfBlac Sfc-1 (mutant) + antibiotic<br />
**[[4euz]], [[4ev4]] – SfBlac Sfc-1 (mutant) + antibiotic<br />
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**[[1bue]] – EncBlac<br />
**[[1bue]] – EncBlac<br />
**[[4tze]], [[4tzb]] - EcBlac Ndm-5<br />
**[[4tze]], [[4tzb]] - EcBlac Ndm-5<br />
**[[6ogo]] - EcBlac Ndm-9<br />
**[[3dw0]], [[3c5a]] - EcBlac Kpc-2 <br />
**[[3dw0]], [[3c5a]] - EcBlac Kpc-2 <br />
**[[5ll7]] - EcBlac Kpc-2 + boronic acid inhibitor<br />
**[[5ll7]] - EcBlac Kpc-2 + boronic acid inhibitor<br />
Line 430: Line 449:


**[[1bsg]] – Blac – ''Streptomyces albus''<br />
**[[1bsg]] – Blac – ''Streptomyces albus''<br />
**[[6wgr]] -  SaBlac <br />
**[[1alq]], [[1blp]], [[1dja]], [[1djb]], [[1djc]], [[1ghi]] – SaBlac (mutant) <br />
**[[1alq]], [[1blp]], [[1dja]], [[1djb]], [[1djc]], [[1ghi]] – SaBlac (mutant) <br />
**[[1gce]], [[1xx2]] - EncBlac <br />
**[[1gce]], [[1xx2]] - EncBlac <br />
**[[6op6]], [[6op7]] - EncBlac Vim-20<br />
**[[4fr7]], [[4fsb]] - EncBlac Vim-31 (mutant)<br />
**[[4fr7]], [[4fsb]] - EncBlac Vim-31 (mutant)<br />
**[[5hfo]] -  EcBlac Oxa-232<br />
**[[5hfo]] -  EcBlac Oxa-232<br />
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**[[3wrz]], [[3ws0]], [[3ws1]], [[3ws2]], [[3ws3]], [[3ws4]], [[3ws5]] – ChBlac (mutant)<br />
**[[3wrz]], [[3ws0]], [[3ws1]], [[3ws2]], [[3ws3]], [[3ws4]], [[3ws5]] – ChBlac (mutant)<br />
**[[6njk]] – Blac – ''Sulfitobacter''<br />
**[[6njk]] – Blac – ''Sulfitobacter''<br />
**[[6n9k]] – EcBlac <br />
**[[6n9k]], [[6x9y]] – EcBlac <br />
**[[6n36]] – Blac – ''Chitinophaga pinensis''<br />
**[[6n36]] – Blac – ''Chitinophaga pinensis''<br />
**[[6mu9]] – Blac – ''Bacillus megaterium''<br />
**[[6mu9]] – Blac – ''Bacillus megaterium''<br />
**[[6ch0]], [[6cgy]] – AaBlac – ''Alicyclobacillus acidoterrestris''<br />
**[[6ch0]], [[6cgy]] – AaBlac – ''Alicyclobacillus acidoterrestris''<br />
**[[6edm]] – CdBlac <br />
**[[6izc]] – VpBlac – ''Vibrio parahaemolyticus''<br />
**[[6izd]] – VpBlac (mutant)<br />
**[[6wgp]] – Blac – ''Xanthomonas campestris''<br />
**[[6wgq]] – Blac – ''Shigella flexneri''<br />
**[[6whl]] – Blac – ''Legionella pneumophila''<br />
**[[6wjm]] – Blac – ''Desulfarculus baarsii''<br />




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**[[3fv7]], [[3fyz]], [[3fzc]], [[3mbz]] – AbBlac + inhibitor<br />
**[[3fv7]], [[3fyz]], [[3fzc]], [[3mbz]] – AbBlac + inhibitor<br />
**[[4wm9]] – AbBlac Oxa-24 + antibiotic <br />
**[[4wm9]] – AbBlac Oxa-24 + antibiotic <br />
**[[6q5b]], [[6q5f]] – KpBlac Oxa-48 (mutant) + avibactam <br />
**[[6q5b]], [[6q5f]] – KpBlac Oxa-48 (mutant) + inhibitor<br />
**[[6uqs]], [[6uqt]], [[6uqu]], [[6ur3]] – PaBlac (mutant) + boronic acid inhibitor<br />
**[[6cgz]] – AaBlac + lactone derivative<br />
**[[6cgz]] – AaBlac + lactone derivative<br />
**[[6pqc]] – CdBlac (mutant) + antibiotic <br />
}}
}}


[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 13:38, 24 June 2020

3D Structures of Beta-lactamase3D Structures of Beta-lactamase

Updated on 24-June-2020

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman, Jaime Prilusky