Beta-lactamase 3D structures: Difference between revisions

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**[[3s4x]], [[5har]], [[5hai]] - EncBlac A (mutant) – ''Enterobacter cloacae''<br />
**[[3s4x]], [[5har]], [[5hai]] - EncBlac A (mutant) – ''Enterobacter cloacae''<br />
**[[3zdj]], [[4b88]] – Blac – precambrian<br />
**[[3zdj]], [[4b88]] – Blac – precambrian<br />
**[[4c6y]], [[4c75]], [[5fqm]] – Blac – synthetic<br />
**[[4c6y]], [[4c75]], [[5fqm]], [[6tww]], [[6txd]], [[6ty6]] – Blac – synthetic<br />
**[[5tfq]] – Blac – ''Bacterioides cellulosilyticus''<br />
**[[5tfq]] – Blac – ''Bacterioides cellulosilyticus''<br />
**[[5glc]], [[5gla]], [[5gl9]] - BtBlac A - ''Burkholderia thailandensis''<br />
**[[5glc]], [[5gla]], [[5gl9]] - BtBlac A - ''Burkholderia thailandensis''<br />
**[[6afm]], [[6afo]] - BtBlac A (mutant)<br />
**[[4yfm]] – Blac – ''Mycobacterium abscessus''<br />
**[[4yfm]] – Blac – ''Mycobacterium abscessus''<br />
**[[6ni1]] – BsBlac A – ''Bacillus subtilis''<br />
**[[6ni1]] – BsBlac A – ''Bacillus subtilis''<br />
**[[6niq]] – Blac A – ''Rhodopseudomonas palustris''<br />
**[[6niq]] – Blac A – ''Rhodopseudomonas palustris''<br />
**[[6nj1]] – Blac A – ''Clostridium kluyveri''<br />
**[[6nj1]] – Blac A – ''Clostridium kluyveri''<br />
**[[6b6a]], [[6b6b]], [[6b69]], [[6b68]], [[6b5x]] – MtBlac – ''Mycobacterium tuberculosis''<br />
**[[6b6a]], [[6b6b]], [[6b69]], [[6b68]], [[6b5x]], [[6n14]] – MtBlac – ''Mycobacterium tuberculosis''<br />
**[[6v6n]] - Blac A (mutant) – ''Agrobacterium tumefaciens'' <br />
**[[6w34]] – BcBlac A (mutant) - ''Bacillus cereus''<br />
**[[6wip]] – Blac A – ''Micromonospora aurantiaca''<br />


*β-lactamase class A binary complex
*β-lactamase class A binary complex
Line 57: Line 61:
**[[1ong]], [[1q2p]], [[1vm1]], [[2h5s]], [[2zd8]], [[3d4f]], [[3mke]], [[3mkf]], [[3mxr]], [[3mxs]], [[4fh2]], [[4gd6]], [[4gd8]], [[4gdb]], [[4mbf]], [[4r3b]], [[5ee8]], [[4zam]] - KpBlac A Shv-1 + inhibitor<br />
**[[1ong]], [[1q2p]], [[1vm1]], [[2h5s]], [[2zd8]], [[3d4f]], [[3mke]], [[3mkf]], [[3mxr]], [[3mxs]], [[4fh2]], [[4gd6]], [[4gd8]], [[4gdb]], [[4mbf]], [[4r3b]], [[5ee8]], [[4zam]] - KpBlac A Shv-1 + inhibitor<br />
**[[1rcj]], [[1tdg]], [[2a49]], [[2h0t]], [[2h0y]], [[2h10]], [[4mbh]], [[4mbk]] - KpBlac A Shv-1 (mutant) + inhibitor<br />
**[[1rcj]], [[1tdg]], [[2a49]], [[2h0t]], [[2h0y]], [[2h10]], [[4mbh]], [[4mbk]] - KpBlac A Shv-1 (mutant) + inhibitor<br />
**[[5t66]] - KpBlac A + boronic acid inhibitor<br />
**[[5t66]], [[5zyb]] - KpBlac A + boronic acid inhibitor<br />
**[[1w7f]], [[3b3x]], [[2y91]], [[4a5r]] - BlBlac A + inhibitor<br />
**[[1w7f]], [[3b3x]], [[2y91]], [[4a5r]] - BlBlac A + inhibitor<br />
**[[3m2j]], [[4n9k]], [[4n9l]] - BlBlac A (mutant) + inhibitor<br />
**[[3m2j]], [[4n9k]], [[4n9l]] - BlBlac A (mutant) + inhibitor<br />
Line 63: Line 67:
**[[2q9m]], [[2q9n]] - EncBlac A + inhibitor <br />
**[[2q9m]], [[2q9n]] - EncBlac A + inhibitor <br />
**[[3bfc]], [[3bff]], [[3bfg]] – CsBlac A Sed-1 (mutant) + inhibitor<br />  
**[[3bfc]], [[3bff]], [[3bfg]] – CsBlac A Sed-1 (mutant) + inhibitor<br />  
**[[3nia]] - PaBlac A Ges-2 + inhibitor<br />
**[[3nia]] - PaBlac A Ges-2 + inhibitor - ''Pseudomonas aeruginosa'' <br />
**[[6q35]] - PaBlac A Ges-5 + boronic acid inhibitor <br />
**[[3p98]] – Blac Tem-72 + citrate – ''Morganella morganii''<br />
**[[3p98]] – Blac Tem-72 + citrate – ''Morganella morganii''<br />
**[[5tg7]], [[5tg6]], [[5tg5]], [[5tg4]] - AbBlac A + boronic acid inhibitor<br />
**[[5tg7]], [[5tg6]], [[5tg5]], [[5tg4]] - AbBlac A + boronic acid inhibitor<br />
**[[5gld]], [[5glb]] - BtBlac A + boronic acid inhibitor <br />
**[[5gld]], [[5glb]] - BtBlac A + boronic acid inhibitor <br />
**[[6afn]], [[6afp]] - BtBlac A (mutant) + boronic acid inhibitor <br />
**[[5ne1]] - StmBlac A + boronic acid inhibitor <br />
**[[5ne1]] - StmBlac A + boronic acid inhibitor <br />
**[[6qw7]], [[6qw8]] - StmBlac A + inhibitor <br />
**[[6w2z]] - BsBlac A + inhibitor <br />
**[[6w33]] – BcBlac A (mutant) + inhibitor <br />


*β-lactamase class A binary complex with antibiotics
*β-lactamase class A binary complex with antibiotics
Line 86: Line 95:
*Extended-spectrum β-lactamase class A
*Extended-spectrum β-lactamase class A


**[[3ni9]] - PaESBL A GES-2<br />
**[[3ni9]] - PaESBL A Ges-2<br />
**[[4gnu]], [[4h8r]] - PaESBL A GES-5<br />
**[[4gnu]], [[4h8r]] - PaESBL A Ges-5<br />
**[[5f83]], [[5f82]] - PaESBL A GES-5 (mutant)<br />
**[[5f83]], [[5f82]] - PaESBL A Ges-5 (mutant)<br />
**[[3v3s]] – PaESBL GES-18<br />
**[[3v3s]] – PaESBL Ges-18<br />
**[[1e25]] – PaESBL PER-1 (mutant)<br />
**[[1e25]] – PaESBL Per-1 (mutant)<br />
**[[5eoe]], [[5eoo]] – PaESBL Bel-1 <br />
**[[5eoe]], [[5eoo]] – PaESBL Bel-1 <br />
**[[4wz5]] – PaESBL Oxa-10 <br />
**[[4wz5]] – PaESBL Oxa-10 <br />
**[[5mmy]], [[5mnu]] – PaESBL Oxa-10 (mutant)<br />
**[[5mmy]], [[5mnu]] – PaESBL Oxa-10 (mutant)<br />
**[[4yin]] – PaESBL Oxa-145 <br />
**[[4yin]] – PaESBL Oxa-145 <br />
**[[4d2o]] - CfESBL PER-2 – ''Citrobacter freundii''<br />
**[[4d2o]], [[6dgu]] - CfESBL PER-2 – ''Citrobacter freundii''<br />
**[[5kzh]] - AbESBL A - ''Acinetobacter baumannii''<br />
**[[5kzh]] - AbESBL A - ''Acinetobacter baumannii''<br />
**[[3v3r]] - AbESBL A GES-11<br />
**[[3v3r]] - AbESBL A Ges-11<br />
**[[3tsg]] – AbESBL GES-14<br />
**[[3tsg]] – AbESBL Ges-14<br />
**[[4oqi]], [[4op8]], [[4op5]] - EcESBL Tem-1 (mutant)<br />
**[[4oqi]], [[4op8]], [[4op5]] - EcESBL Tem-1 (mutant)<br />
**[[4opy]] - EcESBL Tem-63 (mutant)<br />
**[[4opy]] - EcESBL Tem-63 (mutant)<br />
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**[[1ylj]], [[2p74]] – EcESBL Ctx-M-9<br />
**[[1ylj]], [[2p74]] – EcESBL Ctx-M-9<br />
**[[3hre]], [[5kmt]], [[5kmu]], [[5kkf]] - EcESBL Ctx-M-9 (mutant)<br />
**[[3hre]], [[5kmt]], [[5kmu]], [[5kkf]] - EcESBL Ctx-M-9 (mutant)<br />
**[[4ua6]] – EcESBL Ctx-M-14 <br />
**[[4ua6]], [[6d7h]] – EcESBL Ctx-M-14 <br />
**[[1ylt]], [[5vth]], [[5twd]], [[6cyn]], [[6cyk]] - EcBlac A Ctx-M-14 (mutant)<br />
**[[1ylt]], [[5vth]], [[5twd]], [[6cyn]], [[6cyk]], [[6d7i]], [[6v5e]], [[6v6g]], [[6v6p]] - EcBlac A Ctx-M-14 (mutant)<br />
**[[4hbt]] – EcESBL Ctx-M-15<br />
**[[4hbt]] – EcESBL Ctx-M-15<br />
**[[1ylw]] - EcESBL Ctx-M-16<br />
**[[1ylw]] - EcESBL Ctx-M-16<br />
**[[1ylp]] - EcESBL Ctx-M-27 (mutant)<br />
**[[1ylp]] - EcESBL Ctx-M-27 (mutant)<br />
**[[5zb7]] – EcESBL Ctx-M-64<br />
**[[5zb7]] – EcESBL Ctx-M-64<br />
**[[6j25]] - EcESBL Ctx-M-64 (mutant)<br />
**[[4c3q]], [[5a93]], [[5a92]], [[5a90]] - EcESBL Ctx-M-97 (mutant)<br />
**[[4c3q]], [[5a93]], [[5a92]], [[5a90]] - EcESBL Ctx-M-97 (mutant)<br />
**[[6c78]], [[6c79]], [[6c7a]] - EcESBLToho-1 <br />
**[[6c78]], [[6c79]], [[6c7a]] - EcESBLToho-1 <br />
**[[1we4]], [[2xr0]], [[2zq7]], [[2zq8]], [[2zq9]], [[2zqa]], [[2zqc]], [[2zqd]], [[4bd0]], [[4bd1]], [[4c3k]] - EcESBLToho-1 (mutant) <br />
**[[1we4]], [[2xr0]], [[2zq7]], [[2zq8]], [[2zq9]], [[2zqa]], [[2zqc]], [[2zqd]], [[4bd0]], [[4bd1]], [[4c3k]], [[6u58]] - EcESBLToho-1 (mutant) <br />
**[[2xqz]], [[2wyx]] - EcESBL Toho-1 (mutant) – Neutron<br />
**[[2xqz]], [[2wyx]] - EcESBL Toho-1 (mutant) – Neutron<br />
**[[6nvt]] – EcESBL Tla-1 <br />
**[[6pq9]] – EcESBL Tla-1 (mutant)<br />
**[[3zny]] - KpBlac A Ctx-M-12A (mutant) <br />
**[[3zny]] - KpBlac A Ctx-M-12A (mutant) <br />
**[[4pm8]] - KpBlac A Ctx-M-14 <br />
**[[4pm8]] - KpBlac A Ctx-M-14 <br />
**[[4pm6]], [[4pma]] - KpBlac A Ctx-M-14 (mutant) <br />
**[[4pm6]], [[4pma]] - KpBlac A Ctx-M-14 (mutant) <br />
**[[2qpn]] – KpESBL A GES-1<br />
**[[2qpn]] – KpESBL A Ges-1<br />
**[[5gs8]] – SmESBL TLA-3 <br />
**[[6ts9]] - PaESBL A Ges-5<br />
**[[5gs8]] – SmESBL Tla-3 <br />
**[[6bn3]] – SeESBL Ctx-M-151 – ''Salmonela enterica''<br />
**[[6bn3]] – SeESBL Ctx-M-151 – ''Salmonela enterica''<br />


Line 127: Line 140:
**[[3g2y]], [[3g2z]], [[3g30]], [[3g31]], [[3g32]], [[3g34]], [[3g35]], [[4dds]], [[4ddy]], [[4de0]], [[4de1]], [[4de2]], [[4de3]], [[1yly]], [[1ym1]], [[1yms]] - EcBlac A Ctx-M-9 + inhibitor<br />
**[[3g2y]], [[3g2z]], [[3g30]], [[3g31]], [[3g32]], [[3g34]], [[3g35]], [[4dds]], [[4ddy]], [[4de0]], [[4de1]], [[4de2]], [[4de3]], [[1yly]], [[1ym1]], [[1yms]] - EcBlac A Ctx-M-9 + inhibitor<br />
**[[4len]] - EcESBL Ctx-M-9 (mutant) + inhibitor<br />
**[[4len]] - EcESBL Ctx-M-9 (mutant) + inhibitor<br />
**[[4uaa]], [[4ua7]] – EcESBL Ctx-M-14 + inhibitor<br />
**[[4uaa]], [[4ua7]], [[6md8]], [[6mia]], [[6mz1]], [[6mz2]] – EcESBL Ctx-M-14 + inhibitor<br />
**[[6bt6]], [[6v7t]], [[6v83]], [[6v8v]] – EcESBL Ctx-M-14 (mutant) + inhibitor<br />
**[[4ua9]], [[1ylz]] – EcESBL Ctx-M-14 + boronic acid inhibitor<br />
**[[4ua9]], [[1ylz]] – EcESBL Ctx-M-14 + boronic acid inhibitor<br />
**[[5vle]], [[5top]], [[5toy]] - EcESBL Ctx-M-14 (mutant) + ruthenium inhibitor<br />
**[[5vle]], [[5top]], [[5toy]], [[6vnu]] - EcESBL Ctx-M-14 (mutant) + ruthenium inhibitor<br />
**[[6unb]] – EcESBL Ctx-M-14 + antibiotic<br />
**[[4xxr]], [[5u53]], [[5tw6]], [[5twe]] - EcESBL Ctx-M-14 (mutant) + antibiotic<br />
**[[4xxr]], [[5u53]], [[5tw6]], [[5twe]] - EcESBL Ctx-M-14 (mutant) + antibiotic<br />
**[[4hbu]] – EcESBL Ctx-M-15 + inhibitor<br />
**[[4hbu]], [[6sp6]] – EcESBL Ctx-M-15 + inhibitor<br />
**[[4xuz]] - KpBlac A Ctx-M-15 + boronic acid inhibitor<br />
**[[4xuz]] - KpBlac A Ctx-M-15 + boronic acid inhibitor<br />
**[[6bu3]] – EcESBL Ctx-M-27 + inhibitor<br />
**[[6bu3]] – EcESBL Ctx-M-27 + inhibitor<br />
**[[4x69]] – EcESBL Ctx-M-44 + inhibitor<br />
**[[4x69]] – EcESBL Ctx-M-44 + inhibitor<br />
**[[6ity]], [[6j2o]] – EcESBL Ctx-M-64 + inhibitor<br />
**[[6j2b]], [[6j2k]] – EcESBL Ctx-M-64 (mutant) + inhibitor<br />
**[[5g18]] - EcESBL Ctx-M-97 + substrate<br />
**[[5g18]] - EcESBL Ctx-M-97 + substrate<br />
**[[4oqh]] - EcESBL Tem-63 (mutant) + boronic acid inhibitor<br />
**[[4oqh]] - EcESBL Tem-63 (mutant) + boronic acid inhibitor<br />
**[[4oq0]], [[4opz]] - EcESBL Tem-94 (mutant) + boronic acid inhibitor<br />
**[[4oq0]], [[4opz]] - EcESBL Tem-94 (mutant) + boronic acid inhibitor<br />
**[[4c3q]], [[4opz]] - EcESBL Toho-1 (mutant) + boronic acid inhibitor - Neutron<br />
**[[4c3q]], [[4opz]] - EcESBL Toho-1 (mutant) + boronic acid inhibitor - Neutron<br />
**[[5x5g]] – SmESBL TLA-3 + inhibitor<br />
**[[6nvu]], [[6pq8]] – EcESBL Tla-1 + inhibitor<br />
**[[5x5g]] – SmESBL Tla-3 + inhibitor<br />
**[[6bpf]] – SeESBL Ctx-M-151 + inhibitor <br />
**[[6bpf]] – SeESBL Ctx-M-151 + inhibitor <br />
**[[6d3g]] – CfESBL Per-2 + inhibitor <br />


*Extended-spectrum β-lactamase class A binary complex with antibiotics
*Extended-spectrum β-lactamase class A binary complex with antibiotics


**[[4qu3]] - PaESBL A GES-2 + antibiotic<br />
**[[4qu3]] - PaESBL A Ges-2 + antibiotic<br />
**[[5eph]], [[5eua]] – PaESBL Bel-1 + antibiotic<br />
**[[5eph]], [[5eua]] – PaESBL Bel-1 + antibiotic<br />
**[[1ymx]] - EcESBL Ctx-M-9 + antibiotic<br />
**[[1ymx]] - EcESBL Ctx-M-9 + antibiotic<br />
Line 152: Line 171:
**[[4pm5]], [[4pm7]] - KpBlac A Ctx-M-14 (mutant) + antibiotic<br />
**[[4pm5]], [[4pm7]] - KpBlac A Ctx-M-14 (mutant) + antibiotic<br />
**[[4s2i]] - KpBlac A Ctx-M-15 + antibiotic<br />
**[[4s2i]] - KpBlac A Ctx-M-15 + antibiotic<br />
**[[5gwa]] – SmESBL TLA-3 + antibiotic<br />
**[[5gwa]] – SmESBL Tla-3 + antibiotic<br />


*β-lactamase class A complex with β-lactamase inhibitor protein (Blip)
*β-lactamase class A complex with β-lactamase inhibitor protein (Blip)
Line 165: Line 184:
**[[3qhv]], [[3qhy]] - Blac A + Protein Blip – ''Bacillus anthracis''
**[[3qhv]], [[3qhy]] - Blac A + Protein Blip – ''Bacillus anthracis''


*'''β-lactamase class B (Zn containing) or metallo-β-lactamase'''
*'''β-lactamase class B (Zn containing) or metallo-β-lactamase or NDM'''


**[[3fcz]], [[3i0v]], [[3i11]], [[3i13]], [[3i14]], [[3i15]], [[1bc2]], [[1bvt]], [[1mqo]], [[2bc2]], [[3bc2]], [[1bmc]], [[4c09]], [[4nq4]], [[5fqa]] – BcBlac B - ''Bacillus cereus''<br />
**[[3fcz]], [[3i0v]], [[3i11]], [[3i13]], [[3i14]], [[3i15]], [[1bc2]], [[1bvt]], [[1mqo]], [[2bc2]], [[3bc2]], [[1bmc]], [[4c09]], [[4nq4]], [[5fqa]], [[6dja]] – BcBlac B<br />
**[[2m5c]] - BcBlac B – NMR<br />
**[[2m5c]] - BcBlac B – NMR<br />
**[[3knr]], [[3kns]], [[1dxk]], [[2bfk]], [[2bfl]], [[2bfz]], [[2bg2]], [[2bg6]], [[2bg7]], [[2bg8]], [[2bga]], [[2nxa]], [[2nyp]], [[2nze]], [[2nzf]], [[2uyx]] - BcBlac B (mutant) <br />
**[[3knr]], [[3kns]], [[1dxk]], [[2bfk]], [[2bfl]], [[2bfz]], [[2bg2]], [[2bg6]], [[2bg7]], [[2bg8]], [[2bga]], [[2nxa]], [[2nyp]], [[2nze]], [[2nzf]], [[2uyx]] - BcBlac B (mutant) <br />
Line 176: Line 195:
**[[1k07]] – FgBlac B - ''Fluoribacter gormanii''<br />
**[[1k07]] – FgBlac B - ''Fluoribacter gormanii''<br />
**[[1l9y]] - FgBlac B (mutant) <br />
**[[1l9y]] - FgBlac B (mutant) <br />
**[[5n5g]] - PaBlac B Vim-1 - ''Pseudomonas aeruginosa'' <br />
**[[5n5g]] - PaBlac B Vim-1<br />
**[[1ko2]], [[1ko3]], [[4bz3]], [[4nq2]], [[5yd7]] – PaBlac B Vim-2 - ''Pseudomonas aeruginosa''<br />
**[[1ko2]], [[1ko3]], [[4bz3]], [[4nq2]], [[5yd7]] – PaBlac B Vim-2 - ''Pseudomonas aeruginosa''<br />
**[[2whg]], [[2wrs]] - PaBlac B Vim-4<br />
**[[2whg]], [[2wrs]] - PaBlac B Vim-4<br />
Line 186: Line 205:
**[[4ax0]], [[4ax1]] - PaBlac B Aim-1 (mutant)<br />
**[[4ax0]], [[4ax1]] - PaBlac B Aim-1 (mutant)<br />
**[[2y87]], [[2y8a]], [[2y8b]] - PaBlac B Vim-7<br />
**[[2y87]], [[2y8a]], [[2y8b]] - PaBlac B Vim-7<br />
**[[2x02]] - PaBlac Oxa-10<br />
**[[2x01]] - PaBlac Oxa-10 (mutant)<br />
**[[2x01]] - PaBlac Oxa-10 (mutant)<br />
**[[2x02]] - PaBlac Oxa-10<br />
**[[4uam]], [[2fhx]], [[4bp0]], [[5nde]] - PaBlac Imp-1 <br />
**[[4uam]], [[2fhx]], [[4bp0]], [[5nde]] - PaBlac Imp-1 <br />
**[[4f6h]], [[4f6z]], [[5ls3]] – PaBlac Imp-1 (mutant)<br />
**[[4f6h]], [[4f6z]], [[5ls3]] – PaBlac Imp-1 (mutant)<br />
**[[6r79]] - PaBlac Imp-13 <br />
**[[5b3r]] - PaBlac Imp-18 <br />
**[[5b3r]] - PaBlac Imp-18 <br />
**[[5ev6]], [[5y5b]] - SmBlac Imp-1 – ''Serratia marcescens''<br />
**[[5ev6]], [[5y5b]] - SmBlac Imp-1 – ''Serratia marcescens''<br />
Line 203: Line 223:
**[[3l6n]] – Blac B – ''Chryseobacter indolegenes''<br />
**[[3l6n]] – Blac B – ''Chryseobacter indolegenes''<br />
**[[3r2u]] – SaBlac B<br />
**[[3r2u]] – SaBlac B<br />
**[[3rkj]], [[3sbl]], [[3sfp]], [[3spu]], [[3zr9]], [[3pg4]] - KpBlac B Ndm-1<br />
**[[3rkj]], [[3sbl]], [[3sfp]], [[3spu]], [[3zr9]], [[3pg4]], [[6c6i]] - KpBlac B Ndm-1<br />
**[[3srx]], [[6ex7]] - KpBlac B Ndm-1 + Cd <br />
**[[3srx]], [[6ex7]] - KpBlac B Ndm-1 + Cd <br />
**[[4h0d]] - KpBlac B Ndm-1 + Mn<br />
**[[4h0d]] - KpBlac B Ndm-1 + Mn<br />
**[[5xp6]], [[5n0i]], [[5k4m]], [[5jqj]], [[5zgi]], [[5nbk]] - KpBlac B Ndm-1 + Zn<br />
**[[5xp6]], [[5n0i]], [[5k4m]], [[5jqj]], [[5zgi]], [[5nbk]], [[6twt]] - KpBlac B Ndm-1 + Zn<br />
**[[5zgf]] - KpBlac B Ndm-1 (mutant) + Zn<br />
**[[5zgf]] - KpBlac B Ndm-1 (mutant) + Zn<br />
**[[6cac]] - KpBlac B Ndm-1 + Zn + Co + Cd<br />
**[[6cac]] - KpBlac B Ndm-1 + Zn + Co + Cd<br />
Line 215: Line 235:
**[[6mgy]] - KpBlac B Ndm-5 + Zn<br />
**[[6mgy]] - KpBlac B Ndm-5 + Zn<br />
**[[6mgx]] - KpBlac B Ndm-6 + Zn<br />
**[[6mgx]] - KpBlac B Ndm-6 + Zn<br />
**[[6r78]] - KpBlac Imp-13 <br />
**[[5n5g]] - PaBlac B Vim-1<br />
**[[5n5g]] - PaBlac B Vim-1<br />
**[[3s0z]], [[6c89]] - EcBlac B Ndm-1<br />
**[[3s0z]], [[6c89]], [[5zr8]] - EcBlac B Ndm-1<br />
**[[4tz9]] - EcBlac B Ndm-3<br />
**[[4tz9]] - EcBlac B Ndm-3<br />
**[[4tyf]] - EcBlac B Ndm-4<br />
**[[4tyf]] - EcBlac B Ndm-4<br />
Line 222: Line 243:
**[[5wih]] - EcBlac B Ndm-12<br />
**[[5wih]] - EcBlac B Ndm-12<br />
**[[6bm9]] – EcBlac B Vim-2<br />
**[[6bm9]] – EcBlac B Vim-2<br />
**[[6lvj]] - EcBlac Imp-6 <br />
**[[6skp]], [[6skq]], [[6skr]] - EcBlac Oxa-10 <br />
**[[6ovz]] - EcBlac <br />
**[[2yz3]] – Blac Vim-2 – ''Pseudomonas putida''<br />
**[[2yz3]] – Blac Vim-2 – ''Pseudomonas putida''<br />
**[[3sd9]] – SfBlac B - ''Serratia fonticola''<br />
**[[3sd9]] – SfBlac B - ''Serratia fonticola''<br />
Line 232: Line 256:
**[[5ctn]], [[5ctm]] – Blac – ''Bacillus pumilus''<br />
**[[5ctn]], [[5ctm]] – Blac – ''Bacillus pumilus''<br />
**[[4ysb]] – Blac + Fe – ''Myxococcus xanthus''<br />
**[[4ysb]] – Blac + Fe – ''Myxococcus xanthus''<br />
**[[6cqs]] – Blac + Zn – Sediminispirochaeta smaragdinae<br />
**[[6cqs]] – Blac + Zn – ''Sediminispirochaeta smaragdinae''<br />
**[[6dn4]] – CsBlac – ''Cronobacter sakazakii''<br />
**[[6dq2]], [[6dqh]], [[6dr8]], [[6nc5]] – CsBlac (mutant)<br />
**[[6mfi]] – Blac Mim-2 – ''Simiduia agarivorans''<br />
**[[6t5l]] – Blac B1 Myo-1 – ''Myroides odoratimimus''<br />
**[[6v54]], [[6v5m]], [[6v70]], [[6v71]] – HbBlac (mutant) – ''Hirschia baltica''<br />
**[[6v72]], [[6v73]] – ElBlac – ''Erythrobacter litoralis''<br />


*β-lactamase class B binary complex with antibiotic
*β-lactamase class B binary complex with antibiotic
Line 238: Line 268:
**[[5n5i]] - PaBlac B Vim-1 + antibiotic<br />
**[[5n5i]] - PaBlac B Vim-1 + antibiotic<br />
**[[4s2o]], [[5mox]], [[5moz]] - PaBlac Oxa-10 + antibiotic<br />
**[[4s2o]], [[5mox]], [[5moz]] - PaBlac Oxa-10 + antibiotic<br />
**[[6r73]], [[6rzr]], [[6rzs]], [[6s0h]] - PaBlac Imp-13 + antibiotic<br />
**[[5b1u]], [[5b15]], [[5aya]], [[5axo]] - SmBlac Smb-1 + antibiotic<br />
**[[5b1u]], [[5b15]], [[5aya]], [[5axo]] - SmBlac Smb-1 + antibiotic<br />
**[[4zej]] - PsBlac Dim-1 + antibiotic<br />
**[[4zej]] - PsBlac Dim-1 + antibiotic<br />
2aio – StmBlac B + antibiotic
**[[2aio]] – StmBlac B + antibiotic<br />
3q6x, 4ey2, 4eyb, 4eyf, 4efl, 4hl1, 4hl2, [[4eyl]], [[4hky]], [[4ram]], [[4raw]], [[4rbs]], [[4rl0]], [[4rl2]], [[5of2]], [[5o2e]] – KpBlac B Ndm-1+ antibiotic
**[[3q6x]], [[4ey2]], [[4eyb]], [[4eyf]], [[4efl]], [[4hl1]], [[4hl2]], [[4eyl]], [[4hky]], [[4ram]], [[4raw]], [[4rbs]], [[4rl0]], [[4rl2]], [[5of2]], [[5o2e]], ]], [[5o2f]], [[5zge]], [[6jkb]]  – KpBlac B Ndm-1+ antibiotic<br />
**[[4rm5]] – KpBlac B Ndm-1 (mutant) + antibiotic<br />
**[[4rm5]] – KpBlac B Ndm-1 (mutant) + antibiotic<br />
**[[5ypi]], [[5ypk]], [[5ypl]], [[5ypm]], [[5ypn]] – EcBlac B Ndm-1 + antibiotic<br />
**[[5ypi]], [[5ypk]], [[5ypl]], [[5ypm]], [[5ypn]] – EcBlac B Ndm-1 + antibiotic<br />
**[[6lf4]] - Blac Vmb-1 + antibiotic – ''Vibrio alginolyticus''<br />


*β-lactamase class B binary complex
*β-lactamase class B binary complex
Line 251: Line 283:
**[[1jje]], [[1jjt]], [[3lce]], [[3wxc]], [[4c1f]], [[4c1g]], [[5ndb]] - PaBlac B Imp-1+ inhibitor<br />
**[[1jje]], [[1jjt]], [[3lce]], [[3wxc]], [[4c1f]], [[4c1g]], [[5ndb]] - PaBlac B Imp-1+ inhibitor<br />
**[[5n5h]] - PaBlac B Vim-1 + inhibitor<br />
**[[5n5h]] - PaBlac B Vim-1 + inhibitor<br />
**[[4c1d]], [[4c1e]], [[4pvo]], [[4pvt]], [[4ua4]], [[5lm6]], [[5le1]], [[5lch]], [[5lcf]], [[5lca]], [[5fqc]], [[5acx]], [[5acw]], [[5acv]], [[5acu]], [[5y6d]], [[5nhz]], [[5ni0]], [[5n4s]], [[5n4t]], [[5mxq]], [[5mxr]], [[5k48]], [[6hf5]], [[6ew3]], [[5y6e]], [[5o7n]] - PaBlac B Vim-2 + inhibitor<br />
**[[4c1d]], [[4c1e]], [[4pvo]], [[4pvt]], [[4ua4]], [[5lm6]], [[5le1]], [[5lch]], [[5lcf]], [[5lca]], [[5fqc]], [[5acx]], [[5acw]], [[5acv]], [[5acu]], [[5y6d]], [[5nhz]], [[5ni0]], [[5n4s]], [[5n4t]], [[5mxq]], [[5mxr]], [[5k48]], [[6hf5]], [[6ew3]], [[5y6e]], [[5o7n]], [[6dd0]], [[6dd1]], [[6j8r]], [[6kxo]], [[6kzn]], [[6sp7]], [[6v1p]] - PaBlac B Vim-2 + inhibitor<br />
**[[6ibs]], [[6ibv]], [[6jn6]], [[6o5t]], [[6rpn]] - PaBlac B Vim-2 + boronic acid inhibitor<br />
**[[5n55]], [[5n58]] - PaBlac B Vim-5 + inhibitor<br />
**[[5n55]], [[5n58]] - PaBlac B Vim-5 + inhibitor<br />
**[[5mm9]] - PaBlac B Vim-17 + inhibitor<br />
**[[5mm9]] - PaBlac B Vim-17 + inhibitor<br />
**[[5fq9]] - PaBlac Oxa-10 + inhibitor<br />
**[[5fq9]], [[6rtn]] - PaBlac Oxa-10 + inhibitor<br />
**[[1m2x]] – Blac B + captopril – ''Elizabethkingia meningoseptica''<br />
**[[1m2x]] – Blac B + captopril – ''Elizabethkingia meningoseptica''<br />
**[[1vgn]], [[3vqz]], [[5hh4]], [[5ewa]], [[5ev8]], [[5axr]] - SmBlac Imp-1+ inhibitor<br />
**[[1vgn]], [[3vqz]], [[5hh4]], [[5ewa]], [[5ev8]], [[5axr]], [[6jed]], [[6jka]], [[6lbl]] - SmBlac Imp-1+ inhibitor<br />
**[[6k4t]], [[6k4x]] - SmBlac Smb-1+ inhibitor<br />
**[[2doo]] - SmBlac Imp-1+ fluorescent agent<br />
**[[2doo]] - SmBlac Imp-1+ fluorescent agent<br />
**[[2fu8]], [[2fu9]], [[2gfj]], [[2gfk]], [[2hb9]], [[2qdt]], [[5dpx]] - StmBlac B + inhibitor<br />
**[[2fu8]], [[2fu9]], [[2gfj]], [[2gfk]], [[2hb9]], [[2qdt]], [[5dpx]] - StmBlac B + inhibitor<br />
Line 265: Line 299:
**[[5ew0]] - SfBlac B + inhibitor<br />
**[[5ew0]] - SfBlac B + inhibitor<br />
**[[3q6v]] – SfBlac B + glycerol <br />
**[[3q6v]] – SfBlac B + glycerol <br />
**[[4exy]], [[4exs]], [[4eyl]], [[4hky]], [[4ram]], [[4raw]], [[4rbs]], [[4rl0]], [[4rl2]], [[4u4l]], [[5a5z]], [[5n0h]], [[5zjc]], [[5zj8]], [[5zj7]], [[5zj2]], [[5zj1]], [[5zio]], [[5zh1]], [[5zgz]], [[5zgy]], [[5zgx]], [[5zgw]], [[5zgv]] [[5zgu]], [[5zgt]], [[5zgr]], [[5zgq]], [[5zgp]] – KpBlac B Ndm-1+ inhibitor<br />
**[[4exy]], [[4exs]], [[4eyl]], [[4hky]], [[4ram]], [[4raw]], [[4rbs]], [[4rl0]], [[4rl2]], [[4u4l]], [[5a5z]], [[5n0h]], [[5zjc]], [[5zj8]], [[5zj7]], [[5zj2]], [[5zj1]], [[5zio]], [[5zh1]], [[5zgz]], [[5zgy]], [[5zgx]], [[5zgw]], [[5zgv]], [[5zgu]], [[5zgt]], [[5zgr]], [[5zgq]], [[5zgp]], [[6d1a]], [[6d1b]], [[6d1c]], [[6d1d]], [[6d1e]], [[6d1f]], [[6d1g]], [[6d1h]], [[6d1i]], [[6d1j]], [[6d1k]], [[6efj]], [[6mdu]], [[6ny7]], [[6rmf], [[6v1m]]  – KpBlac B Ndm-1+ inhibitor<br />
**[[6o3r]] – KpBlac B Ndm-1 (mutant) + inhibitor<br />
**[[6q2y]], [[6q30]] – KpBlac B Ndm-1 + boronic acid inhibitor<br />
**[[5nai]] – KpBlac B Vim-5 + inhibitor<br />
**[[5nai]] – KpBlac B Vim-5 + inhibitor<br />
**[[6kxi]], [[6kzl]] – EcBlac B Ndm-1+ inhibitor<br />
**[[5hh6]], [[5hh5]] - StmBlac B + inhibitor<br />
**[[5hh6]], [[5hh5]] - StmBlac B + inhibitor<br />
**[[5fqb]] - BcBlac B + inhibitor<br />
**[[5fqb]] - BcBlac B + inhibitor<br />
**[[5evk]], [[5evd]], [[5evb]] - StmBlac B + inhibitor<br />
**[[5evk]], [[5evd]], [[5evb]] - StmBlac B + inhibitor<br />
**[[6v61]] – HbBlac (mutant) + inhibitor<br />


*'''β-lactamase class C'''
*'''β-lactamase class C'''

Revision as of 13:22, 24 June 2020

3D Structures of Beta-lactamase3D Structures of Beta-lactamase

Updated on 24-June-2020

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman, Jaime Prilusky