3D Structures of transcriptional activator3D Structures of transcriptional activator
Updated on 01-January-2024 - For a general description of the protein see Transcriptional activator
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- Gcn4 TA See Gcn4
- Gcn5 TA
- 1e6i – yTA brododomain + histone H4 peptide - yeast
- 1ygh – yTA histone acetyltransferase domain
- C-Myb TA; domains – DBD ; DBD repeat 1 38-89; repeat 2 90-141; repeat 3 142-193; transcription activation 291-315
- 1mse, 1msf – mTA DBD 90-193 + DNA – NMR - mouse
- 1mbe, 1mbf – mTA DBD repeat 1 + DNA - NMR
- 1mbg, 1mbh – mTA DBD repeat 2 + DNA - NMR
- 1mbj, 1mbk – mTA DBD repeat 3 + DNA - NMR
- 1h88 – mTA DBD + DNA + CCAAT/enhancer binding protein β
- 1h89 – mTA DBD + DNA + CAAT/enhancer binding protein β
- 1guu – mTA DBD repeat 1
- 1gv2 – mTA DBD repeat 2,3
- 1gv5 – mTA DBD repeat 2
- 1gvd – mTA DBD repeat 2 (mutant)
- 1idy, 1idz – mTA DBD repeat 3 (mutant) - NMR
- 1sb0, 2agh – mTA transcription activation domain + CREB-binding protein - NMR
- 6dmx, 6dnq – mTA transcription activation domain + CREB-binding protein p3ptide + Bzip factor
- Psp operon TA
- 2bjw – EcTA AAA domain – Escherichia coli
- 4qnr – EcTA AAA domain (mutant) + ATP
- 4qos – EcTA AAA domain (mutant) + ADP
- 2c98 – EcTA AAA domain + ADP
- 2c99 – EcTA AAA domain + AMPPNP
- 2vii – EcTA AAA domain + AMP + Mg
- 5nss – EcTA in RNA polymerase complex – Cryo EM
- TenA TA
- 1tyh, 1yaf – BsTA – Bacillus subtilis
- 2qzc – TA – Sulfolobus solfataricus
- 3no6 – TA – Staphylococcus epidermidis
- 1yak – BsTA + pyrimidine derivative
- 2qcx – BsTA (mutant) + pyrimidine derivative
- 1udd – TA – Pyrococcus horikishii
- LasR TA or transcriptional regulator LasR
- 6mww – PaTA – Pseudomonas aeruginosa
- 2uv0 – PaTA LBD residues 1-173
- 3ix3, 6mvn, 6mvm – PaTA LBD + oxo-dodecanoyl-homoserine lactone
- 3ix4, 3ix8, 3jpu, 6d6a, 6d6b, 6d6c, 6d6d, **6d6p, 6d6l, 6d6m, 6d6o, 6d6n – PaTA LBD + benzoate derivative
- 6mwl – PaTA + oxothiolan derivative
- 6mwh – PaTA + acetamide derivative
- 4ng2 – PaTA LBD + protein
- 6mwz – PaTA (mutant) + peptide
- 6v7w, 6v7x – PaTA + Aqs1
- CadC TA
- 3ly7, 3lya – EcTA periplasmic domain 188-512
- 3ly8, 3ly9 – EcTA periplasmic domain (mutant)
- 5ju7 – EcTA DBD 2-107
- Mal-Rpel TA
- Brg1 TA
- 5ea1 – hTA bromodomain 1418-1536 - human
- 3uvd – hTA bromodomain - NMR
- 2grc, 3uvd, 5dkd, 6zs2 – hTA bromodomain + inhibitor
- 6hr2 – hTA bromodomain + ElonginB + ElonginC + pVHL
- 2i8b – TA C terminal – Zaire ebolavirus
- 3v7o – TA C terminal – Reston ebolavirus
- Flagelar TA
- 1g8e – EcTA FlhD
- 2avu – EcTA FlhC+FLHD
- 5hxg – StTA FlhD + STM1697
- Tipa TA
- 1ny9 – SlTA antibiotic binding domain – Streptomyces lividans - NMR
- 2mbz, 2mc0 - SlTA antibiotic binding domain + thiopeptide - NMR
- 1r8d – BsTA
- Rfah TA
- SoxR TA or redox-sensitive transcriptional activator
- 2zhh – EcTA
- 2zhg – EcTA + DNA
- 6tf4 – VcTA C terminal - Vibrio cholera - NMR
- GlxR TA
- 3r6s – CgTA +cAMP – Corynebacterium glutamicum
- 4byy – CgTA
- OxyR TA or hydrogen peroxide-inducible genes activator
- 3t22, 3ho7, 3uki – TA regulatory domain – Porphyromonas gingivalis
- 7l4s – TA regulatory domain – Shewnella oneidensis
- 4y0m – PaTA regulatory domain
- 4x6g, 4xws – PaTA regulatory domain (mutant)
- 1i69, 1i6a – EcTA regulatory domain (mutant)
- 6g1d – CgTA regulatory domain (mutant)
- 6g1b, 6g4r – CgTA regulatory domain + H2O2
- 5x0v – VvTA - Vibrio vulnificus
- 5b70, 5b7d, 5b7h, 5x0q – VvTA (mutant)
- 3jv9 – NmTA – Neisseria meningitidis
- PlcR TA
- 4fsc – BtTA - Bacillus thuringiensis
- 2qfc – BtTA + PapR peptide
- 3u3w – BtTA + DNA + PapR peptide
- VirB TA or virulence regulon transcriptional activator VirB
- MafA TA
- CysB TA or Cys regulon transcriptional activator CysB
- 4gwo, 4gxa, 4lon, 4lp2 – StTA C terminal – Salmonella typhimurium
- 4lq2, 4lq5, 4m4g – StTA C terminal + acetylserine
- 1al3 – TA cofactor binding domain – Klebsiella aerogenes
- 5z50 – PaTA regulatory domain
- 5z4y, 5z4z – PaTA NTD domain
- HlyU TA
- ToxR TA
- LysR TA
- 5x0o – VvTA
- 5x0n – VvTA (mutant)
- 3t1b, 3szp – VcTA
- 6tpr, 6z07, 6z17, 6z5k, 6yz3, 7o2t, 7o2u – PaTA + antagonist
- 6yiz, 7nbw – PaTA + agonist
- 5z7h – SaTA
- 4pzj – TA – Eggerthella lenta
- 3hhf, 3hhg, 4ab5 – NmTA
- 3fzj – TA – Comamonas testosteroni
- 1ixc, 1iz1 – CnTA – Cupriavidus necator
- 5xxp, 7d98 – CnTA + DNA
- 1uth, 2y7r, 5ae4 – TA – Burkholderia cepacia
- 7trv, 7trw – TA LBD – Yersinia pestis
- 7erp, 7erq – CsTA regulatory domain – Cronobacter sakazakii
- 7fdf – CsTA regulatory domain (mutant)
- Aft2 TA
- Mga TA
- 5way – SpTA – Streptococcus pneumoniae
- Spt7 TA
- Quorum-sensing TA or TraR
- 5l07 – YeTA – Yersinia enterocolitica
- 5l09 – YeTA + THF derivative
- 1l3l – AtTA + pheromone + DNA – Agrobacterium tumefaciens
- 1h0m – AtTA + auto-inducer + DNA
- MexT TA
- 6l33 – PaTA regulatory domain
- ComR TA
- 5juf, 6qer – StTA – Streptococcus thermophilus
- 5jub – StTA + DNA
- 5fd4 – TA – Streptococcus suis
- 7n10, 7n1n – SmTA DBD + Prx – Streptococcus mutans
- 6hu8 – SvTA – Streptococcus vestibularis
- 6hua – SvTA + peptide
- FasR TA
- 6o6p – MtTA + DNA – Mycobacterium tuberculosis
- 6o6o – MtTA + myristic acid
- 6o6n – MtTA + arachinoyl-CoA
- ModE TA
- TetR family TA
- 1z77, 2id6, 2iek, 1zkg, 4i76, 3ih2, 3ih3, 3ih4 – TmTA – Thermotoga maritima
- 4i6z – TmTA + DNA
- 1zk8, 2fq4, 4me9 – BcTA – Bacillus cereus
- 3cwr – TA – Rhodspirillum rubrum
- 1z0x – EfTA – Enterococcus faecalis
- 3c2b – AfTA – Agrobacterium fabrum
- 2o7t – CgTA
- 2g7s – AtTA
- 3gzi – TA – Shewanella loihica
- 2qib, 2zcx, 7ky1 – ScTA – Streptomyces coelicolor
- 2hyt – TA – Pectobacterium atrosepticum
- 3cdl – PsTA – Pseudomonas syringae
- 3kkc – SaTA – Streptococcus agalactiae
- 3nnr – TA – Marinobacter aquaeolei
- 3on4 – TA – Legionella pneumophila
- 3f1b – RjTA – Rhodococcus jostii
- 3eup – TA – Cytophaga hutchinsonii
- 3egq – TA – Archaeoglobus fulgidus
- 4hku – LmTA – Listeria monocytogenes
- 3nrg, 3qbm – TA – Chlotoflexus aurantiacus
- 6nsr – PaTA (mutant) + DNA
- 4jkz – MsTA – Mycobacterium smegmatis
- 6el2 – SacTA – Sulfolobus acidocaldarius
- 6en8 – SacTA + DNA
- TetR/AcrR family TA
- 2rae – RjTA
- 3lhq – StTA
- 3b81 – CpTA – Clostridium acetobutylicum
- 3dcf – TA – Thermobifida fusca
- 3mvp – SmTA
- 5d18, 5d19, 6a4l, 6a4w – MtTA
- 2eh3 – TA – Aquifex aeolicus
- 3vuq – TtTA – Thermus thermophilus
- 7eqe – SgTA – Streptococcus griseus
- 7eqf – SgTA + ligand
- 5gp9, 5gpa – BhTA – Bacillus halodurans
- 5gpc – BhTA + DNA
- 6g87 – BdTA – Bradyrhizobium diazoefficiens
- 6g8h – BdTA + naringenin
- 6g8g – BdTA + genistein
- GntR family TA
- MarR family TA or multiple antibiotic resistance protein
- 3boq, 3cjn, 3e6m – RpTA - Ruegeria pomeryi
- 3s2w – TA – Methanosarcina mazei
- 3bpv – TA – Methanobacterium thermoautotrophicum
- 2fbk – DrTA – Deinococcus radiodurans
- 5dd8 – DrTA (mutant)
- 2fa5 – TA – Xanthomonas campestris
- 3g3z, 5aiq – NmTA
- 5aip – NmTA + hydroxyphenylacetate
- 5e1w – DmTA – Dihalococcoides mccartyi
- 5e1z, 5e1x, 5e20 – DmTA + phenol derivative
- 6c28 – RpTA + coumaroyl-CoA – Rhodopseudomonas palustris
- 3fm5 – RjTA
- 1z91 – BsTA
- 4b8x – ScTA
- 4yif – MtTA
- 3vb2, 3voe, 4jba – EcTA
- 3vod – EcTA (mutant)
- 5h3r – EcTA (mutant) + DNA
- 5eri – CdTA – Clostridium difficile
- 7dvn – TA + effector – Paenisporosarcina
- 3u2r – TA – Planctopirus limnophilus
- 2rdp – TA – Bacillus stearothermophilus
- MerR family TA or mercuric resistance operon regulatory protein
- AsnC family TA
- AraC family TA or arabinose operon regulatory protein
- 3gra – PpTA – Pseudomonas putida
- 3cu5 – TA – Lacnoclostridium phytofermentans
- 5chh – PaTA
- 2ara – EcTA
- 1xja – EcTA dimerization domain (mutant)
- 2k9s – EcTA DBD - NMR
- 2arc – EcTA + arabinose
- 2aac – EcTA + fucose
- LacI family TA
- PadR family TA
- TrmB TA or tRNA (guanine-N(7)-) methyltransferase
- 2f5t – TA – Thermococcus litoralis
- 3qph – PfTA + sucrose – Pyrococcus furiosus
- IclR TA
- 1mkm – TmTA
- 2o99, 2o9a – EcTA C-terminal
- 1td5 – EcTA LBD
- 7cuo – TA + hydroxybenzoate – Microbacterium hydrocarbonoxydans
- BgaR TA
- SlyA TA
- CouR TA
- 5cyv, 6c28 – RjTA + coumaroyl-CoA – Rhodococcus jostii
- 6c9t – RpTA
- 6c2s – RpTA + DNA
- CueR TA
- LuxR TA
- LuxT TA
- ClgR TA or Clp gene regulator
- LmrR TA
- MvfR TA
- 4jvc, 6z17 – PaTA
- 4jvd, 4jvi, 6q7u, 6q7v, 6tpr, 6yiz, 6yz3, 6z07, **6z17, 6z5k, 7nbw, 7o2t, 7o2u – PaTA + inhibitor
- 6b8a, 6q7w – PaTA LBD 94-295 + inhibitor
- HdfR TA
- 6wn5 – TA – Klebsiella pneumoniae
- McbR TA
- MetR TA
- YvhJ TA
- CgmR TA
- AraR TA or arabinose metabolism transcriptional repressor
- 5bs6, 5dd4 – BtTA – Bacterioides thetaiotaomicron
- 3tb6 – BtTA effector-binding domain 71-362 + arabinose
- 5ddg – BtTA + DNA
- 5deq – BtTA 1-225 + arabinose
- 4egy, 4egz, 4h0e, 5d4r, 5d4s – BsTA DBD 1-68 + DNA
- CarH TA or light-dependent transcriptional regulator
- ZitR TA or zinc transport transcriptional regulator
- LsrR TA
- TA II
- 8igr – EcTA in transcription activation complex – Cryo EM
- TA RAMA
- 7bef, 7beg – EcTA in transcription activation complex – Cryo EM
- PrfA TA or listeriolysin positive regulatory factor A
- 1omi, 2beo – LmTA
- 2bgc, 6qvy, 6qvz, 6qw1, 6qw2 – LmTA (mutant)
- 5lej, 5x6d – LmTA + DNA
- 5lek, 6qwf, 6qwh, 6qwk, 6qwm – LmTA (mutant) + DNA
- 5f1r, 6eut, 6euu, 6euz, 6ev0, 6exk, 6exl, 6exm, 6t5i – LmTA + inhibitor
- 5lrs, 5x6e – LmTA + DNA + glutathione
- 5lrr – LmTA + glutathione
- 6hck – LmTA + peptide
- HTH-type TA or helix-turn-helix-type
- 2uxu – PpTA TtgR + naringenin
- 2uxh – PpTA TtgR + quercetin
- 2uxi – PpTA TtgR + phloretin
- 6ugl, 6kju – VcTA + pyrazine derivative<br />
- 2bv6 – SaTA MgrA – Staphylococcus aureus
- 5hs5, 5ywj, 6k8e – SaTA SarX
- 3hrm, 3hse – SaTA SarZ
- 6r1p – MtTA EthR
- 1ysq – EcTA YiaJ
- 2qop, 3bcg – EcTA AcrR
- 6ldi, 6xh7, 6xh8, 7c17 – EcTA CueR in transcription activation complex – Cryo EM
- 4wls, 4wlw – EcTA CueR + DNA
- 4x1e – EcTA RutR
- 4xk4, 4jyk – EcTA RutR + uracil derivative
- 2hxr – EcTA CynR LBD
- 3hfu – EcTA CynR LBD + N3
- 8bob – EcTA MalT + MalY – Cryo EM
- 2gfn – RjTA Rha1
- 1i1g – PfTA LrpA
- 7cla – TA SkgA – Caulobacter vibrioides
- 7bzd – BsTA HxlR
- 7bze – BsTA HxlR (mutant)
- 7bzg – BsTA HxlR + DNA
- 7amn, 7amt – TA LuxR + DNA – Vibrio alginolyticus
- 2dtz, 2hq5 – SaTA QacR (mutant)
- 3bqz, 3br0, 3btc, 3btl – SaTA QacR (mutant) + malachite green
- 3br1, 3br2, 3bt9, 3btj – SaTA QacR (mutant) + dequalinium
- 3bti – SaTA QacR (mutant) + berberine
- 1qvu,3br3, 3pm1 – SaTA QacR (mutant) + ethidium
- 1rkw, 1rpw – SaTA QacR (mutant) + pentamadine
- 1qvt – SaTA QacR (mutant) + proflavine
- 3br5, 3br6 – SaTA QacR (mutant) + rhodamine
- 2gby – SaTA QacR (mutant) + berenil
- 2g0e – SaTA QacR (mutant) + drug
- 3k1n – AbTA BenM – Acinetobacter baylyi
- 3k1p – AbTA BenM (mutant)
- 2f6g, 2f6p, 2f97 – AbTA BenM effector-binding domain 81-304
- 3m1e – AbTA BenM DBD 1-87
- 4ihs, 4iht – AbTA BenM effector-binding domain + DNA
- 2f78, 2f7a, 2f7c – AbTA BenM effector-binding domain + effector
- 2h9b – EfTA BenM (mutant)
- 2f7b, 2h98 – AbTA CatM effector-binding domain
- 3glb – AbTA CatM effector-binding domain (mutant)
- 2f7c – AbTA CatM effector-binding domain + muconate
- 2cfx – BsTA LrpC
- 2gqq – EcTA LrpC
- 6d2s, 6cyj, 6cz6, 6cyy – MtTA PrpR
- 2pju – EcTA PrpR
- 5t4k, 5t4j, 5t4l, 5x03 – BsTA GabR EBO domain + pyridine derivative
- 4mgr, 4nob, 4tv7 – BsTA GabR
- 6uxz – BsTA GabR + agonist
- 5u9e, 5u93 – TA RhaR regulatory domain – Bacteria latreille
- 5z49 – TA CmpR effector-binding domain + ribulose bisphosphate – Synechococcus elongatus
- 3kos – CfTA AmpR effector binding domain – Citrobacter freundii
- 3kot – CfTA AmpR effector binding domain (mutant)
- 4wkm – CfTA AmpR effector binding domain + peptide
- 5mmh – PaTA AmpR effector binding domain