7bzd

From Proteopedia
Jump to navigation Jump to search

Structure of Bacillus subtilis HxlR, wild typeStructure of Bacillus subtilis HxlR, wild type

Structural highlights

7bzd is a 1 chain structure with sequence from Bacillus subtilis subsp. subtilis str. 168. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.612Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

HXLR_BACSU Positive regulator of hxlAB expression.

Publication Abstract from PubMed

Formaldehyde (FA) has long been considered as a toxin and carcinogen due to its damaging effects to biological macromolecules, but its beneficial roles have been increasingly appreciated lately. Real-time monitoring of this reactive molecule in living systems is highly desired in order to decipher its physiological and/or pathological functions, but a genetically encoded FA sensor is currently lacking. We herein adopt a structure-based study of the underlying mechanism of the FA-responsive transcription factor HxlR from Bacillus subtilis, which shows that HxlR recognizes FA through an intra-helical cysteine-lysine crosslinking reaction at its N-terminal helix alpha1, leading to conformational change and transcriptional activation. By leveraging this FA-induced intra-helical crosslinking and gain-of-function reorganization, we develop the genetically encoded, reaction-based FA sensor-FAsor, allowing spatial-temporal visualization of FA in mammalian cells and mouse brain tissues.

Genetically encoded formaldehyde sensors inspired by a protein intra-helical crosslinking reaction.,Zhu R, Zhang G, Jing M, Han Y, Li J, Zhao J, Li Y, Chen PR Nat Commun. 2021 Jan 25;12(1):581. doi: 10.1038/s41467-020-20754-4. PMID:33495458[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Zhu R, Zhang G, Jing M, Han Y, Li J, Zhao J, Li Y, Chen PR. Genetically encoded formaldehyde sensors inspired by a protein intra-helical crosslinking reaction. Nat Commun. 2021 Jan 25;12(1):581. PMID:33495458 doi:10.1038/s41467-020-20754-4

7bzd, resolution 2.61Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA