Caspase 3D structures: Difference between revisions
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Michal Harel (talk | contribs) New page: ==3D structures of caspase== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *CASP-1 **3e4c – hpro-CASP (mut... |
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*CASP-1 | *CASP-1 | ||
**[[ | **[[8wra]] – h-CASP - human<br /> | ||
**[[ | **[[3e4c]] – hpro-CASP (mutant) <br /> | ||
**[[5fna]] – hCASP CARD domain – Cryo-EM<br /> | **[[5fna]] – hCASP CARD domain – Cryo-EM<br /> | ||
**[[1sc1]], [[1sc4]] - hCASP (mutant) <br /> | **[[1sc1]], [[1sc4]] - hCASP (mutant) <br /> | ||
**[[1sc3]] - hCASP (mutant) + malonate<br /> | **[[1sc3]] - hCASP (mutant) + malonate<br /> | ||
**[[6bz9]] - hCASP + polypeptide inhibitor<br /> | **[[6bz9]] - hCASP + polypeptide inhibitor<br /> | ||
**[[ | **[[1ibc]], [[3d6f]], [[3d6h]], [[3d6m]], [[5mmv]], [[5mtk]], [[6f6r]] - hCASP (mutant) + polypeptide inhibitor<br /> | ||
**[[ | **[[1bmq]], [[2hbq]], [[3ns7]] - hCASP + inhibitor<br /> | ||
**[[ | **[[1rwk]], [[1rwm]], [[1rwn]], [[1rwo]], [[1rwp]], [[1rwv]], [[1rww]], [[1rwx]], [[2fqq]], [[2h48]], [[2h4w]], [[2h4y]], [[2h51]], [[2h54]], [[2hbr]], [[2hby]], [[2hbz]] - hCASP (mutant) + inhibitor<br /> | ||
**[[1ice]] – hCASP + tetrapeptide aldehyde<br /> | **[[1ice]] – hCASP + tetrapeptide aldehyde<br /> | ||
**[[6vie]] – hCASP + gasdermin<br /> | |||
**[[6kn0]] – hCASP (mutant) + gasdermin<br /> | |||
**[[6pzp]] – hCASP + VX-765<br /> | |||
**[[7keu]] – hCASP CARD domain 2-86 + ASC CARD domain – Cryo-EM<br /> | |||
**[[8sv1]] – hCASP subunits p10, p20 + interleukin-18 – Cryo-EM<br /> | |||
**[[2nn3]] – pro-SfCASP (mutant) – ''Spodoptera frugiperda''<br /> | |||
**[[1m72]] – SfCASP + polypeptide inhibitor<br /> | **[[1m72]] – SfCASP + polypeptide inhibitor<br /> | ||
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**[[2xyg]], [[2xyh]], [[2xyp]], [[4jje]] – hCASP subunits P12, P17 + inhibitor<br /> | **[[2xyg]], [[2xyh]], [[2xyp]], [[4jje]] – hCASP subunits P12, P17 + inhibitor<br /> | ||
**[[2xzd]], [[2xzt]], [[2y0b]] - hCASP subunits P12, P17 + DARPIN-3.4<br /> | **[[2xzd]], [[2xzt]], [[2y0b]] - hCASP subunits P12, P17 + DARPIN-3.4<br /> | ||
**[[ | **[[1cp3]], [[1pau]], [[2cdr]], [[2cnk]], [[2cnl]], [[2cnn]], [[2cno]], [[2h65]], [[3edq]], [[3edr]], [[3gjq]], [[3gjr]], [[3gjs]], [[3gjt]], [[3pcx]], [[3pd0]], [[3pd1]], [[4pry]] – hCASP + polypeptide inhibitor<br /> | ||
**[[4dcj]], [[4dco]], [[4dcp]], [[4eha]], [[4ehd]], [[4ehf]], [[4ehh]], [[4ehk]], [[4ehl]], [[4ehn]], [[4ps0]], [[4ps1]] – hCASP subunits P12, P17 + polypeptide inhibitor<br /> | **[[4dcj]], [[4dco]], [[4dcp]], [[4eha]], [[4ehd]], [[4ehf]], [[4ehh]], [[4ehk]], [[4ehl]], [[4ehn]], [[4ps0]], [[4ps1]], [[6ckz]], [[6x8i]], [[7rn7]], [[7rn8]], [[7rn9]], [[7rna]], [[7rnb]], [[7rnc]], [[7rnd]], [[7rne]], [[7rnf]], [[7rng]], [[7seo]], [[7uso]], [[7usp]], [[7usq]] – hCASP subunits P12, P17 + polypeptide inhibitor<br /> | ||
**[[ | **[[2cjx]], [[2cjy]], [[2dko]], [[4qtx]], [[4qty]], [[4qu0]], [[4qu5]], [[4qu8]], [[4qu9]], [[4qua]], [[4qub]] [[4qud]], [[4qud]], [[4que]], [[4qug]], [[4quh]], [[4qui]], [[4quj]], [[4qul]], [[5i9b]], [[5i9t]], [[5iab]], [[5iae]], [[5iag]], [[5iaj]], [[5iak]], [[5ian]], [[5iar]], [[5ias]], [[5ibc]], [[5ibp]], [[5ibr]], [[6bdv]], [[6bfj]], [[6bfk]], [[6bfl]], [[6bfo]], [[6bg0]], [[6bg1]], [[6bg4]], [[6bgk]], [[6bgq]], [[6bgr]], [[6bgs]], [[6bh9]], [[6bha]] - hCASP (mutant) + polypeptide inhibitor<br /> | ||
**[[ | **[[1gfw]], [[1nme]], [[1nmq]], [[1nms]], [[1re1]], [[1rhj]], [[1rhk]], [[1rhm]], [[1rhq]], [[1rhr]], [[1rhu]], [[3deh]], [[3dei]], [[3dej]], [[3dek]], [[3h0e]], [[3kjf]] – hCASP + inhibitor<br /> | ||
**[[ | **[[2c1e]], [[2c2k]], [[2c2m]], [[2c2o]], [[2c2z]], [[2h5i]], [[2h5j]], [[2j30]], [[2j31]], [[2j32]], [[2j33]], [[3itn]], [[4jr0]] – hpro-CASP + polypeptide inhibitor<br /> | ||
[[4jqy]], [[4jqz]] - hpro-CASP (mutant)<br /> | **[[4jqy]], [[4jqz]] - hpro-CASP (mutant)<br /> | ||
**[[1i3o]] - hCASP (mutant) + XIAP-BIR2 | **[[1i3o]] - hCASP (mutant) + XIAP-BIR2<br /> | ||
**[[7wr6]] - hCASP (mutant) + ADPR-glycohydrolase <br /> | |||
**[[7xn4]] - hCASP + CopC + calmodulin + nicotinamide – Cryo EM<br /> | |||
**[[7xn5]], [[7xn6]], [[8e2j]] - hCASP + CopC + calmodulin + ADPR + nicotinamide – Cryo EM<br /> | |||
**[[6wi4]] – CASP + inhibitor – ''Porites asteroides''<br /> | |||
*CASP-4 | |||
**[[6nry]] – hCASP <br /> | |||
**[[7wr0]] – hCASP (mutant) <br /> | |||
**[[6kmz]] – hCASP (mutant) + gasdermin<br /> | |||
**[[7wr1]] – hCASP + Ospc3 C-terminal<br /> | |||
**[[7wr4]], [[7wr5]] – hCASP (mutant) + calmodulin + Ospc3<br /> | |||
**[[8j6k]], [[8spb]] – hCASP subunits p10, p20 + interleukin-18 – Cryo-EM<br /> | |||
**[[6kmt]], [[6kmu]], [[6kn1]] – mCASP (mutant) - mouse<br /> | |||
**[[6kmv]] – mCASP (mutant) + gasdermin<br /> | |||
*CASP-6 | *CASP-6 | ||
**[[ | **[[2wdp]], [[3k7e]], [[3p45]] – hCASP<br /> | ||
**[[3nkf]], [[3nr2]], [[3s8e]], [[3v6l]], [[3v6m]], [[4iyr]], [[ | **[[3nkf]], [[3nr2]], [[3s8e]], [[3v6l]], [[3v6m]], [[4iyr]], [[6deu]], [[6dev]] – hCASP (mutant) <br /> | ||
**[[3od5]], [[3p4u]], [[3qnw]], [[3s70]] – hCASP + polypeptide inhibitor<br /> | **[[3od5]], [[3p4u]], [[3qnw]], [[3s70]] – hCASP + polypeptide inhibitor<br /> | ||
**[[4ejf]] – hCASP subunit P11 + P18 + polypeptide<br /> | **[[4ejf]] – hCASP subunit P11 + P18 + polypeptide<br /> | ||
**[[4fxo]] - hCASP subunit P11 + P18 + Zn<br /> | **[[4fxo]] - hCASP subunit P11 + P18 + Zn<br /> | ||
**[[4hva]] - hCASP subunit P11 + P18 + VEID inhibitor<br /> | **[[4hva]] - hCASP subunit P11 + P18 + VEID inhibitor<br /> | ||
**[[4n5d]] - hCASP subunit P11 + P18 + inhibitor<br /> | **[[4n5d]], [[8eg5]], [[8eg6]] - hCASP subunit P11 + P18 + inhibitor<br /> | ||
**[[6ppm]] - hCASP subunit P11 + P18 + polypeptide inhibitor<br /> | |||
**[[4n6g]], [[4n7j]], [[4n7m]], [[4nbk]], [[4nbl]], [[4nbn]] - hCASP subunit P11 + P18 (mutant) + inhibitor<br /> | **[[4n6g]], [[4n7j]], [[4n7m]], [[4nbk]], [[4nbl]], [[4nbn]] - hCASP subunit P11 + P18 (mutant) + inhibitor<br /> | ||
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**[[3ibf]] – hCASP large subunit<br /> | **[[3ibf]] – hCASP large subunit<br /> | ||
**[[3r5k]], [[4hq0]] - hCASP (mutant) <br /> | **[[3r5k]], [[4hq0]] - hCASP (mutant) <br /> | ||
**[[ | **[[1gqf]], [[1k86]] – hCASP catalytic domain<br /> | ||
**[[1k88]] – hpro-CASP (mutant) <br /> | **[[1k88]] – hpro-CASP (mutant) <br /> | ||
** | **[[2ql5]], [[2ql7]], [[2ql9]], [[2qlb]], [[2qlf]], [[2qlj]], [[3edr]], [[3ibc]] - hCASP large subunit + polypeptide inhibitor<br /> | ||
**[[1f1j]], [[4hqr]] - hCASP + polypeptide inhibitor<br /> | **[[1f1j]], [[4hqr]] - hCASP + polypeptide inhibitor<br /> | ||
**[[6x8j]], [[6x8k]], [[6x8l]] - hCASP subunits p11, p20 + polypeptide inhibitor<br /> | |||
**[[8dgz]] - hCASP + peptide + inhibitor<br /> | |||
**[[7wzs]] – hCASP + calmodulin + CopC <br /> | |||
**[[3h1p]], [[4jr1]], [[4jr2]] - hCASP catalytic domain (mutant) + polypeptide inhibitor<br /> | **[[3h1p]], [[4jr1]], [[4jr2]] - hCASP catalytic domain (mutant) + polypeptide inhibitor<br /> | ||
**[[1shj]], [[1shl]] - hCASP catalytic domain (mutant) + inhibitor<br /> | **[[1shj]], [[1shl]] - hCASP catalytic domain (mutant) + inhibitor<br /> | ||
**[[4fea]], [[5v6z]], [[ | **[[4fea]], [[5v6u]], [[5v6z]], [[8dj3]] - hCASP catalytic domain + inhibitor<br /> | ||
**[[1i51]], [[1kmc]] - hCASP (mutant) + XIAP-BIR2<br /> | **[[1i51]], [[1kmc]] - hCASP (mutant) + XIAP-BIR2<br /> | ||
**[[1i4o]] - hCASP P20 subunit + XIAP<br /> | **[[1i4o]] - hCASP P20 subunit + XIAP<br /> | ||
**[[4jb8]], [[4lsz]] - hCASP large+small subunits + DARPIN<br /> | **[[4jb8]], [[4lsz]] - hCASP large+small subunits + DARPIN<br /> | ||
** | **[[4zvo]], [[4zvp]], [[4zvq]], [[4zvr]], [[4zvs]], [[4zvt]], [[4zvu]], [[5ic6]], [[5ic4]], [[6cl0]], [[6cl1]], [[6cl2]] - hCASP large+small subunits + peptide inhibitor<br /> | ||
*CASP-8 | *CASP-8 | ||
**[[5l08]] – hCASP – Cryo-EM<br /> | **[[5l08]] – hCASP – Cryo-EM<br /> | ||
**[[4zbw]] - hCASP death effector domain<br /> | **[[6xkj]] – hCASP CARD domain 451-537 – Cryo-EM<br /> | ||
**[[ | **[[4zbw]], [[7lvj]], [[7lvm]] - hCASP death effector domain<br /> | ||
**[[5h31]], [[5h33]] - hCASP death effector domain (mutant)<br /> | |||
**[[6agw]] - hCASP pro domain 1-180<br /> | |||
**[[3kjn]], [[3kjq]] – hCASP subunit P18 + inhibitor<br /> | **[[3kjn]], [[3kjq]] – hCASP subunit P18 + inhibitor<br /> | ||
**[[1f9e]], [[ | **[[1f9e]], [[1qdu]], [[1qtn]] - hCASP subunit α,β + polypeptide inhibitor<br /> | ||
**[[1qtn]], [[4jj7]], [[4jj8]], [[4prz]] - hCASP P18, P11 + polypeptide inhibitor<br /> | **[[1qtn]], [[4jj7]], [[4jj8]], [[4prz]] - hCASP P18, P11 + polypeptide inhibitor<br /> | ||
**[[3h11]] - hCASP (mutant) + polypeptide inhibitor<br /> | **[[3h11]] - hCASP (mutant) + polypeptide inhibitor<br /> | ||
**[[2y1l]] - hCASP subunits P18 P10<br /> | **[[2y1l]] - hCASP subunits P18 P10<br /> | ||
**[[2k7z]] – hpro-CASP (mutant) – NMR<br /> | **[[6x8h]] - hCASP P18, P10 + polypeptide inhibitor<br /> | ||
**[[ | **[[8ym4]], [[8ym5]], [[8ym6]], [[8ynk]], [[8ynm]], [[8ynn]] - hCASP subunit P10 + apoptosis regulator – Cryo EM<br /> | ||
**[[8ybx]], [[8yd7]], [[8yd8]], [[8yni]] - hCASP (mutant) + apoptosis regulator + FADD – Cryo EM<br /> | |||
**[[6px9]] - hpro-CASP catalytic domain 276-538 + inhibitor<br /> | |||
**[[2k7z]] – hpro-CASP catalytic domain (mutant) – NMR<br /> | |||
**[[1i4e]], [[2fun]] – CASP + P35 – ''Autographa californica'' | |||
*CASP-9 | *CASP-9 | ||
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**[[1jxq]] - hCASP + polypeptide inhibitor<br /> | **[[1jxq]] - hCASP + polypeptide inhibitor<br /> | ||
**[[3v3k]] – hCASP + effector protein<br /> | **[[3v3k]] – hCASP + effector protein<br /> | ||
**[[ | **[[5juy]], [[5wvc]], [[5wve]] – hCASP CARD domain + APAF-1<br /> | ||
**[[1nw9]] – hCASP catalytic domain + XIAP-BIR3<br /> | **[[1nw9]] – hCASP catalytic domain + XIAP-BIR3<br /> | ||
**[[3ygs]], [[4rhw]] – hpro-CASP + APAF-1 CARD | **[[3ygs]], [[4rhw]] – hpro-CASP + APAF-1 CARD | ||
*CASP-11 | |||
**[[6ns7]] – mCASP 60-243<br /> | |||
**[[6kxg]] – mCASP CARD domain 1-463<br /> | |||
*''Drosophila melanogaster'' CASP | *''Drosophila melanogaster'' CASP | ||
**[[2fp3]] – DmCASP Dronc residues 136-450 – ''Drosophila melanogaster''<br /> | **[[2fp3]] – DmCASP Dronc residues 136-450 – ''Drosophila melanogaster''<br /> | ||
**[[8ynl]] - DmCASP DronC residues 10-111 + Dark<br /> | |||
**[[3sir]] - DmCASP drICE residues 78-332<br /> | **[[3sir]] - DmCASP drICE residues 78-332<br /> | ||
**[[3sip]] – DmCASP drICE residues 78-230 + apoptosis inhibitor<br /> | **[[3sip]] – DmCASP drICE residues 78-230 + apoptosis inhibitor<br /> | ||
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*Metacaspase | *Metacaspase | ||
**[[ | **[[4af8]], [[4afp]], [[4afr]], [[4afv]] – MCASP (mutant) – ''Trypanosom brucei''<br /> | ||
**[[4f6o]] – yMCASP 1 – yeast<br /> | **[[4f6o]] – yMCASP 1 – yeast<br /> | ||
**[[4f6p]] – yMCASP 1 (mutant)<br /> | **[[4f6p]] – yMCASP 1 (mutant)<br /> | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] |
Latest revision as of 11:48, 15 January 2025
3D structures of caspase3D structures of caspase
Updated on 15-January-2025