Histone 3D structures: Difference between revisions
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**[[1hst]] – cH5<br /> | **[[1hst]] – cH5<br /> | ||
**[[2xql]], [[3c9k]] - cH3.2 + H4 + H2A + H2B – Cryo EM<br /> | **[[2xql]], [[3c9k]] - cH3.2 + H4 + H2A + H2B – Cryo EM<br /> | ||
**[[6k01]], [[6w4l]] - XlH2A/H2B - Xenopus laevis <br /> | **[[6k01]], [[6w4l]] - XlH2A/H2B - ''Xenopus laevis'' <br /> | ||
**[[6k03]] - CeH2A + H2B – Caenorhabditis elegans<br /> | **[[7pj1]] – DmH2A + H2B – ''Drosophila melanogaster'' - NMR<br /> | ||
**[[6k03]] - CeH2A + H2B – ''Caenorhabditis elegans''<br /> | |||
**[[1yqa]] – yH1 (mutant) – yeast – NMR<br /> | **[[1yqa]] – yH1 (mutant) – yeast – NMR<br /> | ||
**[[1uss]], [[1ust]], [[1uhm]] – yH1 globular domain – NMR<br /> | **[[1uss]], [[1ust]], [[1uhm]] – yH1 globular domain – NMR<br /> | ||
**[[1ku5]] – HPHA – Pyrococcus horikoshii<br /> | **[[1ku5]] – HPHA – ''Pyrococcus horikoshii''<br /> | ||
**[[1b67]], [[1b6w]], [[1a7w]], [[1hta]] – MfHMFA – Methanococcus fervidus<br /> | **[[1b67]], [[1b6w]], [[1a7w]], [[1hta]] – MfHMFA – ''Methanococcus fervidus''<br /> | ||
**[[1bfm]] – MfHB - NMR<br /> | **[[1bfm]] – MfHB - NMR<br /> | ||
**[[1f1e]] – H – Methanopyrus kandleri<br /> | **[[1f1e]] – H – ''Methanopyrus kandleri''<br /> | ||
*Histones complex with protein | *Histones complex with protein | ||
| Line 34: | Line 35: | ||
**[[6miq]], [[6mio]], [[6min]] – hH3 + TFIID<br /> | **[[6miq]], [[6mio]], [[6min]] – hH3 + TFIID<br /> | ||
**[[6mim]], [[6mil]] – hH3 + AF9<br /> | **[[6mim]], [[6mil]] – hH3 + AF9<br /> | ||
**[[7v6q]] – hH3.1 + H4 + NASP + ASF1A<br /> | |||
**[[7vcl]] – hH2A + H2B + BKRF4<br /> | |||
**[[8i17]] – hH2A + H2B + SPT16<br /> | |||
**[[7qxb]], [[7trf]] – hH2A + H2B + telomerase reverse transcriptase + RNA – Cryo EM<br /> | |||
**[[7qxa]] – hH2A + H2B + telomerase reverse transcriptase + adrenocortical dysplasia protein + RNA – Cryo EM<br /> | |||
**[[8h0v]], [[8h0w]] – hH2A + H2B + H4 + H1.2 in RNA polymerase complex – Cryo EM<br /> | |||
**[[5ja4]], [[5bnv]] – hH3.3 + H4 + TONSL + MCM2<br /> | **[[5ja4]], [[5bnv]] – hH3.3 + H4 + TONSL + MCM2<br /> | ||
**[[7cj0]] – hH3.3 + H4 + HDJC9 + MCM2<br /> | |||
**[[5bo0]], [[5bnx]] – hH3.2 + H4 + ASF1B + MCM2<br /> | **[[5bo0]], [[5bnx]] – hH3.2 + H4 + ASF1B + MCM2<br /> | ||
**[[7vcq]] – hH3.3 + H4 + ASF1B + BKRF4<br /> | |||
**[[ | **[[6mlc]] - hH4 + histone-lysine methyltransferase <br /> | ||
**[[6qxz]] – hH3.3 + histone-lysine methyltransferase - NMR<br /> | |||
**[[6vil]] – hH3.1 + BAHCC1<br /> | **[[6vil]] – hH3.1 + BAHCC1<br /> | ||
**[[7ciz]] – hH3.3 + H4 + MCM2<br /> | **[[7ciz]] – hH3.3 + H4 + MCM2<br /> | ||
| Line 50: | Line 59: | ||
**[[5bsa]], [[5bs7]] – XlH3.2 + H4 + SPT2<br /> | **[[5bsa]], [[5bs7]] – XlH3.2 + H4 + SPT2<br /> | ||
**[[6o22]] - XlH3.2 + H4 + RTT109 + ASF1<br /> | **[[6o22]] - XlH3.2 + H4 + RTT109 + ASF1<br /> | ||
**[[4eo5]] - XlH3.2 (mutant) + H4 (mutant) + | **[[7unk]] - XlH3 + H4 + importin-4 + ASF1<br /> | ||
**[[4eo5]] - XlH3.2 (mutant) + H4 (mutant) + ASF1<br /> | |||
**[[4ld9]] - XlH3.2 + H4 + H2A + H2B + widom sequence reverse + SIR3<br /> | **[[4ld9]] - XlH3.2 + H4 + H2A + H2B + widom sequence reverse + SIR3<br /> | ||
**[[6k09]], [[6k0c]] - CeH2A + H2B + NAP1<br /> | **[[6k09]], [[6k0c]] - CeH2A + H2B + NAP1<br /> | ||
**[[6m2m]] – AtH2A + H2B + OSCHZ1 – Arabidopsis thaliana<br /> | **[[6m2m]] – AtH2A + H2B + OSCHZ1 – ''Arabidopsis thaliana''<br /> | ||
**[[7c7x]] – AtH2A + H2B + NAP1 <br /> | **[[7c7x]] – AtH2A + H2B + NAP1 <br /> | ||
**[[2l5a]] - yH4/H3-like centromeric protein/SCM3 <br /> | **[[2l5a]] - yH4/H3-like centromeric protein/SCM3 <br /> | ||
**[[2jss]] - yH2A/H2B + CHZ1 – NMR<br /> | **[[2jss]] - yH2A/H2B + CHZ1 – NMR<br /> | ||
**[[4wnn]] – yH32A + H2B + SPT2<br /> | **[[4wnn]] – yH32A + H2B + SPT2<br /> | ||
**[[2hue]] - yH3 + H4 + anti-silencing protein | **[[2hue]] - yH3 + H4 + anti-silencing protein<br /> | ||
**[[4uuz]] – DmH3 + H4 + DNA replication licensing factor | **[[7xay]] - yH3 + H4 + cytochrome b562 + ASF1<br /> | ||
**[[2yfv]], [[2yfw]] - KlH4 + H3-like centromeric protein + SCM3 – Kluyveromyces lactis<br /> | **[[4uuz]] – DmH3 + H4 + DNA replication licensing factor <br /> | ||
**[[2yfv]], [[2yfw]] - KlH4 + H3-like centromeric protein + SCM3 – ''Kluyveromyces lactis''<br /> | |||
**[[6uph]] - Kl H3-like centromeric protein + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | **[[6uph]] - Kl H3-like centromeric protein + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
**[[1pfb]] – H3 + polycomb protein – Strongylocentrus purpuratus<br /> | **[[1pfb]] – H3 + polycomb protein – ''Strongylocentrus purpuratus''<br /> | ||
*Human nucleosome core + DNA | *Human nucleosome core + DNA | ||
| Line 68: | Line 79: | ||
**[[3av1]], [[2av2]], [[3av2]], [[3waa]], [[3wa9]], [[3w99]], [[3w98]], [[3w97]], [[3w96]], [[5x7x]], [[3a6n]], [[3afa]], [[2cv5]], [[5jrg]], [[5gxq]], [[5gt3]], [[5gt0]], [[5gsu]], [[5gse]], [[5cpk]], [[5cpj]], [[5cpi]], [[5b33]], [[5b32]], [[5b31]], [[5b2j]], [[5b2i]], [[5b24]], [[5b0z]], [[5b0y]], [[5ay8]], [[5avc]], [[5avb]], [[5av9]], [[5av8]], [[5av6]], [[5av5]], [[5z5t]], [[4ym6]], [[4ym5]], [[5y0c]], [[5onw]], [[5ong]], [[5omx]], [[6hkt]], [[6jou]], [[6jr0]], [[6jr1]], [[6k1i]], [[6k1j]], [[6j1k]], [[6ke9]], [[6l9h]], [[6le9]], [[6ipu]], [[6iq4]], [[6jxd]], [[6kvd]], [[6ler]], [[6m3v]], [[6m44]], [[6v2k]] – hH3.1 + H4 + H2A + H2B in nucleosome<br /> | **[[3av1]], [[2av2]], [[3av2]], [[3waa]], [[3wa9]], [[3w99]], [[3w98]], [[3w97]], [[3w96]], [[5x7x]], [[3a6n]], [[3afa]], [[2cv5]], [[5jrg]], [[5gxq]], [[5gt3]], [[5gt0]], [[5gsu]], [[5gse]], [[5cpk]], [[5cpj]], [[5cpi]], [[5b33]], [[5b32]], [[5b31]], [[5b2j]], [[5b2i]], [[5b24]], [[5b0z]], [[5b0y]], [[5ay8]], [[5avc]], [[5avb]], [[5av9]], [[5av8]], [[5av6]], [[5av5]], [[5z5t]], [[4ym6]], [[4ym5]], [[5y0c]], [[5onw]], [[5ong]], [[5omx]], [[6hkt]], [[6jou]], [[6jr0]], [[6jr1]], [[6k1i]], [[6k1j]], [[6j1k]], [[6ke9]], [[6l9h]], [[6le9]], [[6ipu]], [[6iq4]], [[6jxd]], [[6kvd]], [[6ler]], [[6m3v]], [[6m44]], [[6v2k]] – hH3.1 + H4 + H2A + H2B in nucleosome<br /> | ||
**[[6r0c]], [[6t79]], [[6r94]], [[6r93]], [[6l4a]], [[6t93]], [[7nl0]] – hH3 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | **[[6r0c]], [[6t79]], [[6r94]], [[6r93]], [[6l4a]], [[6t93]], [[7nl0]] – hH3 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
**[[6l49]], [[6l9z]], [[6m4d]], [[6m4g]], [[6m4h]], [[6r25]], [[7u51]], [[7u52]], [[7u53]], [[7v90]], [[7v9c]], [[7v9j]], [[7v9k]], [[7v9s]], [[7va4]], [[7v96]], [[7xd1]], [[7xzy]], [[7y00]], [[8aag]] - hH3.1 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | |||
**[[5z30]] – hH3.1 + H4 + H2A (mutant) + H2B in nucleosome<br /> | **[[5z30]] – hH3.1 + H4 + H2A (mutant) + H2B in nucleosome<br /> | ||
**[[5y0d]] – hH3.1 + H4 + H2A + H2B (mutant) in nucleosome<br /> | **[[5y0d]] – hH3.1 + H4 + H2A + H2B (mutant) in nucleosome<br /> | ||
| Line 74: | Line 86: | ||
**[[3azi]], [[3azj]], [[3azk]], [[3azl]], [[3azm]], [[3azn]] - hH3.1 + H4 (mutant) + H2A + H2B in nucleosome<br /> | **[[3azi]], [[3azj]], [[3azk]], [[3azl]], [[3azm]], [[3azn]] - hH3.1 + H4 (mutant) + H2A + H2B in nucleosome<br /> | ||
**[[7lya]] - hH3.1 + H4 + H2B in nucleosome – Cryo EM<br /> | **[[7lya]] - hH3.1 + H4 + H2B in nucleosome – Cryo EM<br /> | ||
**[[6pwx]] - hH3.2 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | **[[6pwx]] - hH3.2 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
**[[7pet]], [[7peu]], [[7pev]], [[7pew]], [[7pex]], [[7pey]], [[7pez]], [[7pf0]], [[7pf2]], [[7pf3]], [[7pf4]], [[7pf5]], [[7pf6]], [[7pfa]], [[7pfc]], [[7pfd]], [[7pfe]], [[7pff]], [[7pft]], [[7pfu]], [[7pfv]], [[7pfw]], [[7pfx]] - hH3.2 + H4 + H2A + H2B + H1.4 in nucleosome – Cryo EM<br /> | |||
**[[7x57]], [[7x58]] - hH3.1 + H4 in nucleosome – Cryo EM<br /> | |||
**[[5xf5]], [[5xf4]], [[5xf3]] - hH3.1 + H4 + H2A + H2B in nucleosome + Ru derivative<br /> | **[[5xf5]], [[5xf4]], [[5xf3]] - hH3.1 + H4 + H2A + H2B in nucleosome + Ru derivative<br /> | ||
| Line 82: | Line 95: | ||
**[[5x0y]], [[5x0x]] – hH3 + H4 + H2A + H2B in nucleosome + SNF2<br /> | **[[5x0y]], [[5x0x]] – hH3 + H4 + H2A + H2B in nucleosome + SNF2<br /> | ||
**[[3an2]], [[4x23]] – hH4 + H2A + H2B in nucleosome + H3-like centromeric protein <br /> | **[[3an2]], [[4x23]] – hH4 + H2A + H2B in nucleosome + H3-like centromeric protein <br /> | ||
**[[7uv9]] – hH3.2 (mutant) + H4 + H2A + H2B in nucleosome + lysine-specific histone demethylase – Cryo EM<br /> | |||
**[[6r25]] – hH3 + H4 + H2A + H2B in nucleosome + NPAC + lysine-specific histone demethylase – Cryo EM<br /> | **[[6r25]] – hH3 + H4 + H2A + H2B in nucleosome + NPAC + lysine-specific histone demethylase – Cryo EM<br /> | ||
**[[6r92]], [[6r91]], [[6r90]], [[6r8z]], [[6r8y]] - hH3.1 + H4 + H2A + H2B in nucleosome + DNA damage-binding protein – Cryo EM<br /> | **[[6r92]], [[6r91]], [[6r90]], [[6r8z]], [[6r8y]] - hH3.1 + H4 + H2A + H2B in nucleosome + DNA damage-binding protein – Cryo EM<br /> | ||
**[[5e5a]] - hH3.2 + H4 + H2A + H2B in nucleosome + IE1<br /> | **[[5e5a]] - hH3.2 + H4 + H2A + H2B in nucleosome + IE1<br /> | ||
**[[7lyb]] - hH3.1 + H4 + H2B in nucleosome + BRCA1 + BARD1 +UbCH5C – Cryo EM<br /> | **[[7e8i]], [[7lyb]], [[8grq]] - hH3.1 + H4 + H2B in nucleosome + BRCA1 + BARD1 + UbCH5C – Cryo EM<br /> | ||
**[[8grm]] - hH3.1 + H4 + H2B in nucleosome + Commd3 + Ring1B + UbCH5B – Cryo EM<br /> | |||
**[[7jzv]] - hH3.2 (mutant) + H4 + H2A + H2B in nucleosome + BRAC1 – Cryo EM<br /> | **[[7jzv]] - hH3.2 (mutant) + H4 + H2A + H2B in nucleosome + BRAC1 – Cryo EM<br /> | ||
**[[6uxw]] - hH3.3 + H4 + H2A + H2B in nucleosome + SWI/SNF complex – Cryo EM<br /> | **[[6uxw]] - hH3.3 + H4 + H2A + H2B in nucleosome + SWI/SNF complex – Cryo EM<br /> | ||
**[[7ea8]] - hH3.3 + H4 + H2A + H2B in nucleosome + SETD2 – Cryo EM<br /> | **[[7ea8]] - hH3.3 + H4 + H2A + H2B in nucleosome + SETD2 – Cryo EM<br /> | ||
**[[7d1z]] - hH3.1 + H4 + H2A + H2B in nucleosome + SET8 – Cryo EM<br /> | **[[7d1z]] - hH3.1 + H4 + H2A + H2B in nucleosome + SET8 – Cryo EM<br /> | ||
**[[7d20]] - hH4 + H2A + H2B in nucleosome + SET8 + Cenp-A – Cryo EM<br /> | |||
**[[7r5r]] - hH4 + H2A + H2B in nucleosome + CenP-A + CenP-C – Cryo EM<br /> | |||
**[[7y7i]] - hH4 + H2A + H2B in nucleosome + CenP-A + KNL2 – Cryo EM<br /> | |||
**[[6muo]], [[6mup]], [[7bxt]], [[7by0]] - hH4 + H2A + H2B in nucleosome + CenP-A + CenP-C + CenP-N – Cryo EM<br /> | **[[6muo]], [[6mup]], [[7bxt]], [[7by0]] - hH4 + H2A + H2B in nucleosome + CenP-A + CenP-C + CenP-N – Cryo EM<br /> | ||
**[[6x59]], [[6x5a]], [[6xjd]], [[6y5d]], [[6y5e]], [[7jo9]], [[7joa]] - hH3.3 + H4 + H2A + H2B in nucleosome + cGAS – Cryo EM<br /> | **[[7pii]] - hH4 + H2A + H2B in nucleosome + CenP-C – Cryo EM<br /> | ||
**[[7u46]], [[7u47]] - hH4 + H2A + H2B in nucleosome + CenP-A + Cenp-N – Cryo EM<br /> | |||
**[[7ywx]], [[7yyh]] - hH4 + H2A + H2B in nucleosome + CenP-A,C,H-Q,R,U – Cryo EM<br /> | |||
**[[7xd0]] - hH4 + H2A + H2B in nucleosome + L40 + histone domain-containing protein – Cryo EM<br /> | |||
**[[6x59]], [[6x5a]], [[6xjd]], [[6y5d]], [[6y5e]], [[7a08]], [[7jo9]], [[7joa]] - hH3.3 + H4 + H2A + H2B in nucleosome + cGAS – Cryo EM<br /> | |||
**[[7c0m]], [[7ccq]], [[7ccr]] - hH3.1 + H4 + H2A + H2B in nucleosome + cGAS – Cryo EM<br /> | **[[7c0m]], [[7ccq]], [[7ccr]] - hH3.1 + H4 + H2A + H2B in nucleosome + cGAS – Cryo EM<br /> | ||
**[[7bwd]] - hH3.1 + H4 + H2A + H2B in nucleosome + DOT1 + ubiquitin – Cryo EM<br /> | **[[7bwd]] - hH3.1 + H4 + H2A + H2B in nucleosome + DOT1 + ubiquitin – Cryo EM<br /> | ||
**[[7xcr]], [[7xct]] - hH4 + H2A + H2B in nucleosome + DOT1L + ubiquitin – Cryo EM<br /> | |||
**[[7lyc]] - hH3.1 + H4 + H2A + H2B in nucleosome + BARD1 + ubiquitin – Cryo EM<br /> | **[[7lyc]] - hH3.1 + H4 + H2A + H2B in nucleosome + BARD1 + ubiquitin – Cryo EM<br /> | ||
**[[7scy]], [[7scz]] - hH3.1 + H4 + H2A + H2B in nucleosome + PARP1 – Cryo EM<br /> | |||
**[[7e8d]] - hH3.1 + H4 + H2A + H2B in nucleosome + NSD2 – Cryo EM<br /> | |||
**[[6usj]] - hH3.1 + H4 + H2A + H2B in nucleosome + PARP2 – Cryo EM<br /> | **[[6usj]] - hH3.1 + H4 + H2A + H2B in nucleosome + PARP2 – Cryo EM<br /> | ||
**[[6t7a]], [[6t7b]], [[6t7c]], [[6t7d]] - hH3.2 + H4 + H2A + H2B in nucleosome + SOX – Cryo EM<br /> | **[[6t7a]], [[6t7b]], [[6t7c]], [[6t7d]] - hH3.2 + H4 + H2A + H2B in nucleosome + SOX – Cryo EM<br /> | ||
| Line 101: | Line 126: | ||
**[[6upk]], [[6upl]] - hH3.1 + H4 + H2A + H2B in nucleosome + FACT complex – Cryo EM<br /> | **[[6upk]], [[6upl]] - hH3.1 + H4 + H2A + H2B in nucleosome + FACT complex – Cryo EM<br /> | ||
**[[6v92]] – hH3.1 + H4 + H2A + H2B in nucleosome + RSC complex – Cryo EM<br /> | **[[6v92]] – hH3.1 + H4 + H2A + H2B in nucleosome + RSC complex – Cryo EM<br /> | ||
**[[8g57]] – hH3 + H4 + H2A + H2B in nucleosome + sirtuin 6 deacylase – Cryo EM<br /> | |||
**[[7u50]] – hH3 + H4 + H2A + H2B in nucleosome + APE1 – Cryo EM<br /> | |||
**[[7xzx]], [[7xzz]] – hH3 + H4 + H2A + H2B in nucleosome + p53 – Cryo EM<br /> | |||
**[[7zi4]], [[8av6]] – hH3.2 + H4 + H2A + H2B in nucleosome INO80 complex – Cryo EM<br /> | |||
**[[8atf]] – hH3.2 + H4 + H2A + H2B in nucleosome + INO80 + PAPA-1 domain-containing protein – Cryo EM<br /> | |||
**[[7yqk]] – hH3.1 + H4 + H2A + H2B in nucleosome + polyubiquitin + 53bp1 + TP53-binding protein – Cryo EM<br /> | |||
**[[7w9v]] – hH3.1 + H4 + H2A + H2B in nucleosome + p300 – Cryo EM<br /> | |||
**[[7tan]] – hH3.2 + H4 + H2A + H2B in nucleosome + VRK1 – Cryo EM<br /> | |||
**[[7y8r]] - hH3 + H4 + H2A + H2B in nucleosome PBAF complex - Cryo EM<br /> | |||
**[[6fml]] – hH3.2 + H4 + H2A + H2B in nucleosome + RuvB + actin-related protein + IES6 - Cryo EM<br /> | **[[6fml]] – hH3.2 + H4 + H2A + H2B in nucleosome + RuvB + actin-related protein + IES6 - Cryo EM<br /> | ||
| Line 107: | Line 141: | ||
**[[6r1t]], [[6px1]] - XlH3 + H2A + H2B in nucleosome – Cryo EM<br /> | **[[6r1t]], [[6px1]] - XlH3 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
**[[3mnn]], [[3o62]], [[3lz0]], [[3lz1]], [[3lel]], [[3kuy]], [[3c1b]], [[3c1c]], [[2nzd]], [[2fj7]], [[1zbb]], [[1s32]], [[1p34]], [[1p3a]], [[1p3b]], [[1p3f]], [[1p3g]], [[1p3i]], [[1p3k]], [[1p3l]], [[1p3m]] [[1p3o]], [[1p3p]], [[1m18]], [[1m19]], [[1m1a]], [[1kx3]], [[1kx4]], [[1kx5]], [[1aoi]], [[3reh]], [[3rei]], [[3rej]], [[3rek]], [[3rel]], [[3ut9]], [[3uta]], [[3utb]], [[5f99]], [[5dnn]], [[5dnm]], [[5cp6]], [[4z66]], [[4ys3]], [[4xzq]], [[5oy7]], [[5oxv]] - XlH3.2 + H4 + H2A + H2B in nucleosome<br /> | **[[3mnn]], [[3o62]], [[3lz0]], [[3lz1]], [[3lel]], [[3kuy]], [[3c1b]], [[3c1c]], [[2nzd]], [[2fj7]], [[1zbb]], [[1s32]], [[1p34]], [[1p3a]], [[1p3b]], [[1p3f]], [[1p3g]], [[1p3i]], [[1p3k]], [[1p3l]], [[1p3m]] [[1p3o]], [[1p3p]], [[1m18]], [[1m19]], [[1m1a]], [[1kx3]], [[1kx4]], [[1kx5]], [[1aoi]], [[3reh]], [[3rei]], [[3rej]], [[3rek]], [[3rel]], [[3ut9]], [[3uta]], [[3utb]], [[5f99]], [[5dnn]], [[5dnm]], [[5cp6]], [[4z66]], [[4ys3]], [[4xzq]], [[5oy7]], [[5oxv]] - XlH3.2 + H4 + H2A + H2B in nucleosome<br /> | ||
**[[6wz5]], [[6wz9]], [[7ohc]] - XlH3.2 + H4 + H2A + H2B in nucleosome - Cryo EM<br /> | **[[6wz5]], [[6wz9]], [[7kbd]], [[7kbe]], [[7m1x]], [[7ohc]], [[7xfc]], [[7xfi]], [[7xfl]], [[7xfn]], [[7xnp]] - XlH3.2 + H4 + H2A + H2B in nucleosome - Cryo EM<br /> | ||
**[[7kbf]] - XlH3.2 + H4 + H2A + H2B + H1.8 in nucleosome - Cryo EM<br /> | |||
**[[7swy]] - XlH3 (mutant) + H4 + H2A + H2B (mutant) n nucleosome - Cryo EM<br /> | |||
**[[7ktq]] - XlH3 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | **[[7ktq]] - XlH3 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
**[[6esi]], [[6esh]], [[6esg]], [[6esf]], [[6fq8]], [[6fq6]], [[6fq5]], [[6nn6]], [[6nog]], [[6nzo]], [[6px3]], [[6r1u]], [[6ugm]] - XlH3.2 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | **[[6esi]], [[6esh]], [[6esg]], [[6esf]], [[6fq8]], [[6fq6]], [[6fq5]], [[6nn6]], [[6nog]], [[6nzo]], [[6px3]], [[6r1u]], [[6ugm]] - XlH3.2 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
| Line 115: | Line 151: | ||
**[[2f8n]] - XlH3.1 + H4 + H2A + H2B + H3 + H2A macro domain in nucleosome<br /> | **[[2f8n]] - XlH3.1 + H4 + H2A + H2B + H3 + H2A macro domain in nucleosome<br /> | ||
**[[1zla]] – XlH3 + H4 + H2A + H2B + H3 in nucleosome + antigen | **[[1zla]] – XlH3 + H4 + H2A + H2B + H3 in nucleosome + antigen | ||
**[[3mgp]], [[3mgq]], [[3mgr]], [[3mgs]], [[3lja | **[[3mgp]], [[3mgq]], [[3mgr]], [[3mgs]], [[3lja]] [[3b6f]], [[3b6g]], [[4j8u]], [[4j8v]], [[4j8w]], [[4j8x]], [[4kgc]], [[5xf6]] - XlH3.2 + H4 + H2A + H2B in nucleosome + metal<br /> | ||
**[[3kxb]] - XlH3.2 (mutant) + H4 + H2A + H2B (mutant) in nucleosome <br /> | **[[3kxb]] - XlH3.2 (mutant) + H4 + H2A + H2B (mutant) in nucleosome <br /> | ||
**[[3kwq]] - XlH3.2 (mutant) + H4 + H2A + H2B in nucleosome<br /> | **[[3kwq]] - XlH3.2 (mutant) + H4 + H2A + H2B in nucleosome<br /> | ||
*Xenopus nucleosome core + DNA complex with protein | *Xenopus nucleosome core + DNA complex with protein | ||
| Line 124: | Line 159: | ||
**[[6pwx]] - XlH3.2 + H4 + H2A + H2B in nucleosome + RBBP5 - Cryo EM<br /> | **[[6pwx]] - XlH3.2 + H4 + H2A + H2B in nucleosome + RBBP5 - Cryo EM<br /> | ||
**[[6pww]] - XlH3.2 + H4 + H2A + H2B in nucleosome + RBBP5 + WDR5 - Cryo EM<br /> | **[[6pww]] - XlH3.2 + H4 + H2A + H2B in nucleosome + RBBP5 + WDR5 - Cryo EM<br /> | ||
**[[7mbm]], [[7mbn]] - XlH3 + H4 + H2A + H2B in nucleosome + RBBP5 + WDR5 + ALL-1 + ASH2-like protein - Cryo EM<br /> | |||
**[[7ud5]] - XlH3 + H4 + H2A + H2B (mutant) in nucleosome + RBBP5 + WDR5 + cDNA + ASH2-like protein + DPY-30 + polyUb- Cryo EM<br /> | |||
**[[8du4]] - XlH3 + H4 + H2A + H2B (mutant) in nucleosome + RBBP5 + WDR5 + polyUb- Cryo EM<br /> | |||
**[[7vdt]] - XlH3 + H4 + H2A + H2B in nucleosome + BRG1 - Cryo EM<br /> | |||
**[[7vdv]] - XlH3 + H4 + H2A + H2B in nucleosome PBAF complex - Cryo EM<br /> | |||
**[[6om3]] - XlH3.2 + H4 + H2A + H2B in nucleosome + origin recognition complex <br /> | **[[6om3]] - XlH3.2 + H4 + H2A + H2B in nucleosome + origin recognition complex <br /> | ||
**[[6vyp]] - XlH3 (mutant) + H4 + H2A (mutant) + H2B (mutant) in nucleosome + LSD1 + COREST<br /> | **[[6vyp]] - XlH3 (mutant) + H4 + H2A (mutant) + H2B (mutant) in nucleosome + LSD1 + COREST<br /> | ||
**[[7otq]], [[7tn2]] - XlH3.2 + H4 + H2A + H2B in nucleosome + CHD1 – Cryo EM<br /> | |||
**[[7cro]] - XlH3 + H4 + H2A + H2B in nucleosome + NSD2 – Cryo EM<br /> | |||
**[[8f86]] – XlH3 + H4 + H2A + H2B in nucleosome + sirtuin 6 deacylase – Cryo EM<br /> | |||
**[[6ryr]], [[6ryu]] - XlH3.2 + H4 + H2A + H2B in nucleosome + CHD4 – Cryo EM<br /> | **[[6ryr]], [[6ryu]] - XlH3.2 + H4 + H2A + H2B in nucleosome + CHD4 – Cryo EM<br /> | ||
**[[7crp]], [[7crr]] - XlH3 + H4 + H2A + H2B in nucleosome + NSD3 – Cryo EM<br /> | **[[7crp]], [[7crr]] - XlH3 + H4 + H2A + H2B in nucleosome + NSD3 – Cryo EM<br /> | ||
| Line 133: | Line 176: | ||
**[[6kiu]], [[6kiv]], [[6kiw]], [[6kix]], [[6kiz]], [[6pwv]], [[6w5i]], [[6w5m]], [[6w5n]] - XlH3.2 + H4 + H2A + H2B in nucleosome + MLL1 core complex – Cryo EM<br /> | **[[6kiu]], [[6kiv]], [[6kiw]], [[6kix]], [[6kiz]], [[6pwv]], [[6w5i]], [[6w5m]], [[6w5n]] - XlH3.2 + H4 + H2A + H2B in nucleosome + MLL1 core complex – Cryo EM<br /> | ||
**[[7ohb]] - XlH3.2 + H4 + H2A + H2B in nucleosome + TBP – Cryo EM<br /> | **[[7ohb]] - XlH3.2 + H4 + H2A + H2B in nucleosome + TBP – Cryo EM<br /> | ||
**[[7oh9]] - XlH3.2 + H4 + H2A + H2B in nucleosome + TBP + TFIIA – Cryo EM<br /> | **[[7oh9]], [[7oha]] - XlH3.2 + H4 + H2A + H2B in nucleosome + TBP + TFIIA – Cryo EM<br /> | ||
**[[7ea5]] - XlH3 (mutant) + H4 + H2A + H2B in nucleosome + SET2 – Cryo EM<br /> | **[[7ea5]] - XlH3 (mutant) + H4 + H2A + H2B in nucleosome + SET2 – Cryo EM<br /> | ||
**[[6s01]] - XlH3.2 + H4 + H2A + H2B in nucleosome + PC4 and SFRS1-interacting protein – Cryo EM<br /> | **[[6s01]], [[8pc5]], [[8peo]], [[8pep]] - XlH3.2 + H4 + H2A + H2B in nucleosome + PC4 and SFRS1-interacting protein – Cryo EM<br /> | ||
**[[6iy3]], [[6iy2]] - XlH3.2 + H4 + H2A + H2B in nucleosome + SNF2H – Cryo EM<br /> | **[[6iy3]], [[6iy2]] - XlH3.2 + H4 + H2A + H2B in nucleosome + SNF2H – Cryo EM<br /> | ||
**[[7eg6]] - XlH3.2 + H4 + H2A + H2B in nucleosome + SNF5 – Cryo EM<br /> | |||
**[[7egp]] - XlH3.2 + H4 + H2A + H2B in nucleosome + SWI/SNF – Cryo EM<br /> | |||
**[[6ltj]] - XlH3.3 + H4 + H2A + H2B in nucleosome + BAF complex – Cryo EM<br /> | |||
**[[5o9g]] - XlH3.2 + H4 + H2A + H2B in nucleosome + CHD1 – Cryo EM<br /> | **[[5o9g]] - XlH3.2 + H4 + H2A + H2B in nucleosome + CHD1 – Cryo EM<br /> | ||
**[[6x0n]] - XlH3.2 + H4 + H2A + H2B in nucleosome + PARP2 + HPF1 – Cryo EM<br /> | **[[6x0n]] - XlH3.2 + H4 + H2A + H2B in nucleosome + PARP2 + HPF1 – Cryo EM<br /> | ||
| Line 163: | Line 209: | ||
**[[6zhx]], [[6zhy]], [[7enn]] - XlH3.2 + H3 + H4 + H2A + H2B in nucleosome + ALC1 – Cryo EM<br /> | **[[6zhx]], [[6zhy]], [[7enn]] - XlH3.2 + H3 + H4 + H2A + H2B in nucleosome + ALC1 – Cryo EM<br /> | ||
**[[6tem]] - XlH4 + H2A + H2B in nucleosome + CenP-A – Cryo EM<br /> | **[[6tem]] - XlH4 + H2A + H2B in nucleosome + CenP-A – Cryo EM<br /> | ||
**[[7u4d]] - XlH4 + H2A + H2B in nucleosome + CenP-A + Cenp-N – Cryo EM<br /> | |||
**[[4zux]] – XlH3.2 + H4 + H2A + H2B in nucleosome + Saga-associated factors + polyubiquitin + UBP8<br /> | **[[4zux]] – XlH3.2 + H4 + H2A + H2B in nucleosome + Saga-associated factors + polyubiquitin + UBP8<br /> | ||
**[[3mvd]] - XlH3.2 + H4 + H2A + H2B in nucleosome + regulator of chromosome condensation<br /> | **[[3mvd]] - XlH3.2 + H4 + H2A + H2B in nucleosome + regulator of chromosome condensation<br /> | ||
| Line 171: | Line 218: | ||
**[[6rny]] - hH3.3 + H4 + H2A + H2B in nucleosome + integrase – Cryo EM<br /> | **[[6rny]] - hH3.3 + H4 + H2A + H2B in nucleosome + integrase – Cryo EM<br /> | ||
**[[6t9l]] – XlH3 + H4 + H2A + H2B in nucleosome + SAGA complex – Cryo EM<br /> | **[[6t9l]] – XlH3 + H4 + H2A + H2B in nucleosome + SAGA complex – Cryo EM<br /> | ||
**[[8g86]], [[8g88]], [[8g8b]] - XlH3 + H4 + H2A + H2B in nucleosome + OCT4 – Cryo EM<br /> | |||
**[[7vvu]] - XlH3 + H4 + H2A + H2B in nucleosome + EAF6 +YNG2 + ESA1 – Cryo EM<br /> | |||
**[[7vvz]] - XlH3 + H4 + H2A + H2B in nucleosome + EAF6 +YNG2 + ESA1 + NUA4 – Cryo EM<br /> | |||
**[[7xfh]], [[7xfm]] - XlH3.2 + H4 + H2A + H2B in nucleosome + ADPG – Cryo EM<br /> | |||
**[[8gpn]] - XlH3.2 + H4 + H2A + H2B in nucleosome + menin – Cryo EM<br /> | |||
**[[8pc6]] - XlH3.2 + H4 + H2A + H2B in nucleosome + PC4 and SFRS1-interacting protein – Cryo EM<br /> | |||
**[[7ssa]] - XlH3.2 + H4 + H2A + H2B in nucleosome + Cbf1 – Cryo EM<br /> | |||
*Other nucleosome core + DNA | *Other nucleosome core + DNA | ||
| Line 176: | Line 230: | ||
**[[1u35]] - mH3.1 + H2A + H2B + His2A macro domain in nucleosome – mouse<br /> | **[[1u35]] - mH3.1 + H2A + H2B + His2A macro domain in nucleosome – mouse<br /> | ||
**[[5xm1]], [[5xm0]] – mH3 + H4 + H2A + H2B in nucleosome<br /> | **[[5xm1]], [[5xm0]] – mH3 + H4 + H2A + H2B in nucleosome<br /> | ||
**[[7dbh]], [[7vbm]] – mH3mm18 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | |||
**[[1f66]] - XlH3 + mH4 + hH2A + XlH2B in nucleosome <br /> | **[[1f66]] - XlH3 + mH4 + hH2A + XlH2B in nucleosome <br /> | ||
**[[5b1m]], [[5b1l]] - mH3 + H4 + H2A + H2B in nucleosome<br /> | **[[5b1m]], [[5b1l]] - mH3 + H4 + H2A + H2B in nucleosome<br /> | ||
| Line 187: | Line 242: | ||
**[[6dzt]] - DmH3 + H4 + H2A + H2B in nucleosome + antibody <br /> | **[[6dzt]] - DmH3 + H4 + H2A + H2B in nucleosome + antibody <br /> | ||
**[[6xws]], [[6xwt]] - DmH4 + CenP-A + CAL1 <br /> | **[[6xws]], [[6xwt]] - DmH4 + CenP-A + CAL1 <br /> | ||
**[[6j51]], [[6j50]], [[6j4z]], [[6j4y]], [[6j4x]], [[6j4w]], [[6inq]], [[6i84]], [[6a5u]], [[6a5t]], [[6a5r]], [[6a5p]], [[6a5o]], [[6a5l]] – yH3.3 + H4 + H2A + H2B in nucleosome + RNA polymerase + RNA – Cryo EM<br /> | **[[6j51]], [[6j50]], [[6j4z]], [[6j4y]], [[6j4x]], [[6j4w]], [[6inq]], [[6i84]], [[6a5u]], [[6a5t]], [[6a5r]], [[6a5p]], [[6a5o]], [[6a5l]], [[7zs9]], [[7zsa]], [[7zsb]] – yH3.3 + H4 + H2A + H2B in nucleosome + RNA polymerase + RNA – Cryo EM<br /> | ||
**[[6ir9]] – yH3.3 + H4 + H2A + H2B in nucleosome + RNA polymerase + SPT4 + SPT5 + RNA – Cryo EM<br /> | **[[6ir9]] – yH3.3 + H4 + H2A + H2B in nucleosome + RNA polymerase + SPT4 + SPT5 + RNA – Cryo EM<br /> | ||
**[[6gen]], [[6gej]] – yH3 + H4 + H2A + H2B in nucleosome + SWI1 + actin-like protein + vacuolar protein sorting-associated + RNA – Cryo EM<br /> | **[[6gen]], [[6gej]] – yH3 + H4 + H2A + H2B in nucleosome + SWI1 + actin-like protein + vacuolar protein sorting-associated + RNA – Cryo EM<br /> | ||
**[[1id3]] - yH3 + H4 + H2A + H2B in nucleosome <br /> | **[[1id3]] - yH3 + H4 + H2A + H2B in nucleosome <br /> | ||
[[4jjn]], [[4kud]] - yH3 + H4 + H2A.2 + H2B.2 in nucleosome + SIR3 <br /> | **[[4jjn]], [[4kud]] - yH3 + H4 + H2A.2 + H2B.2 in nucleosome + SIR3 <br /> | ||
**[[5zbb]], [[5zba]] - yH3 + H4 + RTT109 + ASF1<br /> | **[[5zbb]], [[5zba]] - yH3 + H4 + RTT109 + ASF1<br /> | ||
**[[5z3v]], [[5z3u | **[[5z3v]], [[5z3u]], [[5z3o]], [[5z3l]] - yH3.2 + H4 + H2A + H2B in nucleosome + SNF2 – Cryo EM<br /> | ||
**[[7k7g]] - yH3 + H4 + H2A + H2B in nucleosome + CenP-3 – Cryo EM<br /> | **[[7k7g]] - yH3 + H4 + H2A + H2B in nucleosome + CenP-3 – Cryo EM<br /> | ||
**[[7z0o]] - yH3 + H4 + H2A + H2B in nucleosome + RNA polymerase transcription initiation factors – Cryo EM<br /> | |||
**[[7e9c]], [[7e9f]] - yH3 + H4 + H2A + H2B in nucleosome + origin recognition complex subunit 1 – Cryo EM<br /> | |||
**[[6qld]] - yH3 + H4 + H2A + H2B in kinetochore + CenP-A – Cryo EM<br /> | **[[6qld]] - yH3 + H4 + H2A + H2B in kinetochore + CenP-A – Cryo EM<br /> | ||
**[[6kxv]] - H3 + | **[[7on1]] - yH4 + H2A + H2B in nucleosome + CenP-A + CenP-C – Cryo EM<br /> | ||
**[[7k78]] - yH4 + H2A + H2B in nucleosome + Sce4 + ScfV – Cryo EM<br /> | |||
**[[6kxv]] - H3 + H4 + H2A + H2B in nucleosome – ''Leishmania major<''br /> | |||
**[[7d69]] - H3 + H4 + H2A + H2B in nucleosome – ''Giardia intestinalis'' – Cryo EM<br /> | |||
**[[7wlr]] - H3 + H4 + H2A + H2B in nucleosome – ''Komagataella pastoris'' – Cryo EM<br /> | |||
**[[7n8n]] - H3 + H4 + H2A + H2B in nucleosome – Melbournevirus – Cryo EM<br /> | |||
**[[7lv8]], [[7lv9]] - H3 + H4 + H2A + H2B in nucleosome – Marseillevirus – Cryo EM<br /> | |||
*Chromatosome core + DNA | *Chromatosome core + DNA | ||
| Line 202: | Line 265: | ||
**[[6la2]], [[6la8]], [[6la9]], [[6lab]], [[7cow]] - hH3.1 + H4 + H2A + H2B + H1.0 in chromatosome <br /> | **[[6la2]], [[6la8]], [[6la9]], [[6lab]], [[7cow]] - hH3.1 + H4 + H2A + H2B + H1.0 in chromatosome <br /> | ||
**[[7dbp]] - hH3.1 + H4 + H2A + H2B + H1.0 in chromatosome – Cryo EM<br /> | **[[7dbp]] - hH3.1 + H4 + H2A + H2B + H1.0 in chromatosome – Cryo EM<br /> | ||
**[[8h1t]] - hH3.1 + H4 + H2A + H2B + H1.4 + BAP1 + ASXL1 + Ub in chromatosome – Cryo EM<br /> | |||
**[[7k5x]], [[7k5y]], [[7k60]], [[7k61]], [[7k63]] - hH3.1 + H4 + H2A + H2B + H1.0 in chromatosome + scFv – Cryo EM<br /> | **[[7k5x]], [[7k5y]], [[7k60]], [[7k61]], [[7k63]] - hH3.1 + H4 + H2A + H2B + H1.0 in chromatosome + scFv – Cryo EM<br /> | ||
**[[5nl0]] - XlH3.2 + H4 + H2A + H2B + H1.0 in chromatosome<br | **[[5nl0]] - XlH3.2 + H4 + H2A + H2B + H1.0 in chromatosome<br | ||
Latest revision as of 14:34, 23 August 2023
3D Structures of histone3D Structures of histone
Updated on 23-August-2023