Alpha-glucosidase 3D structures: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
Michal Harel (talk | contribs)
New page: ==3D structures of α-glucosidase== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *α glucosidase **2g3m –...
 
Michal Harel (talk | contribs)
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
==3D structures of α-glucosidase==
==3D structures of [[Alpha-glucosidase]]==


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Line 6: Line 6:
*α glucosidase
*α glucosidase


**[[3w38]] – bAGS - beet<br />
**[[8slv]] – AGS - mosquito<br />
**[[2lvx]] – fyAGS 2 MRH domain – fission yeast - NMR<br />
**[[2n1h]] – fyAGS 2 MRH domain (mutant) - NMR<br />
**[[2g3m]] – SsAGS – ''Sulfolobus solfataricus''<br />
**[[2g3m]] – SsAGS – ''Sulfolobus solfataricus''<br />
**[[2ze0]], [[5zcb]] – GeAGS – ''Geobacillus''<br />
**[[2ze0]], [[5zcb]] – GeAGS – ''Geobacillus''<br />
**[[3w38]] – bAGS - beet<br />
**[[2d73]], [[2jka]], [[3wfa]], [[5djw]], [[5f7c]], [[3wfa]], [[3a24]], [[5xfm]] – BtAGS – ''Bacterioides thetaiotaomicron''<br />
**[[2d73]], [[2jka]], [[3wfa]], [[5djw]], [[5f7c]], [[3wfa]], [[3a24]], [[5xfm]] – BtAGS – ''Bacterioides thetaiotaomicron''<br />
**[[5hq4]] – PaAGS - ''Pseudoalteromonas''<br />
**[[5hq4]] – PaAGS - ''Pseudoalteromonas''<br />
Line 15: Line 18:
**[[3eqa]] – AnAGS catalytic domain <br />
**[[3eqa]] – AnAGS catalytic domain <br />
**[[1glm]], [[3gly]] – AaAGS – ''Aspergillus awamori''<br />
**[[1glm]], [[3gly]] – AaAGS – ''Aspergillus awamori''<br />
**[[7xoi]] – AGS – ''Aspergillus sojae''<br />
**[[7voh]] – AGS – ''Qipengyuania seohaensis''<br />
**[[1ayx]], [[2fba]] – SfAGS – ''Saccharomycopsis fibuligera''<br />
**[[1ayx]], [[2fba]] – SfAGS – ''Saccharomycopsis fibuligera''<br />
**[[5f0e]] – mAGS - mouse<br />
**[[5aed]], [[5aee]], [[5aeg]] – AGS - ''Esherichia coli''<br />
**[[5aed]], [[5aee]], [[5aeg]] – AGS - ''Esherichia coli''<br />
**[[3wy1]] – HaAGS - ''Halomonas''<br />
**[[3wy1]] – HaAGS - ''Halomonas''<br />
**[[4xpo]] – PsAGS - ''Pedobacter saltans''<br />
**[[4xpo]] – PsAGS - ''Pedobacter saltans''<br />
**[[4xpr]] – PsAGS (mutant)<br />
**[[4xpr]] – PsAGS (mutant)<br />
**[[2lvx]] – fyAGS 2 MRH domain fission yeast - NMR<br />
**[[7t6w]] – CtAGS ''Chaetonium thermophilum''<br />
**[[2n1h]] – fyAGS 2 MRH domain (mutant) - NMR<br />
**[[7d9b]] – WcAGS – ''Weissella cibaria''<br />
**[[8t7z]] – AGS – ''Klebsiella aerogenes''<br />


*α-glucosidase complex
*α-glucosidase complex


**[[4xqm]] – fyAGS 2 MRH domain + mannose<br />
**[[2jke]] – BtAGS + deoxynojirimycin<br />
**[[2jke]] – BtAGS + deoxynojirimycin<br />
**[[2jkp]] – BtAGS + castasnospermine<br />
**[[2jkp]] – BtAGS + castasnospermine<br />
Line 32: Line 38:
**[[5hqb]] – PaAGS (mutant) + panose <br />
**[[5hqb]] – PaAGS (mutant) + panose <br />
**[[1lf9]] – TtAGS + acarbose<br />
**[[1lf9]] – TtAGS + acarbose<br />
**[[8yie]] – AGS + acarbose – Arthrobacter gobiformis<br />
**[[1gai]], [[1gah]], [[1agm]] – AaAGS + acarbose<br />
**[[1gai]], [[1gah]], [[1agm]] – AaAGS + acarbose<br />
**[[2f6d]] – SfAGS + acarbose<br />
**[[2f6d]] – SfAGS + acarbose<br />
**[[1dog]] – AaAGS + deoxynojirimycin<br />
**[[1dog]] – AaAGS + deoxynojirimycin<br />
**[[1acz]], [[1ac0]] – AGS starch-binding domain + cyclodextrin - NMR<br />
**[[1acz]], [[1ac0]] – AGS starch-binding domain + cyclodextrin - NMR<br />
**[[5hjr]] – AGS + glucosidase subunit beta - mouse<br />
**[[5h9o]] – mAGS + glucose<br />
**[[5hjo]] – mAGS + substrate analog<br />
**[[5h9r]] – mAGS + intermediate<br />
**[[5ied]], [[5iee]], [[5ief]], [[5ieg]] – mAGS + iminosugar antiviral<br />
**[[3wy2]] – HaAGS + glucose<br />
**[[3wy3]] – HaAGS (mutant) + glucose<br />
**[[3wy4]] – HaAGS (mutant) + maltose<br />
**[[4xpp]] – PsAGS + galactose<br />
**[[4xpq]] – PsAGS + fucose<br />
**[[4xps]] – PsAGS (mutant) + galactpiranoside<br />
**[[3wel]], [[3wem]], [[3wen]], [[3weo]], [[3w37]] – bAGS + substrate<br />
**[[4xqm]] – fyAGS 2 MRH domain + mannose<br />
**[[5zcc]] – GeAGS (mutant) + maltose<br />
**[[5zcc]] – GeAGS (mutant) + maltose<br />
**[[5zcd]] – GeAGS (mutant) + maltotriose<br />
**[[5zcd]], [[8ibk]], [[8ids]] – GeAGS (mutant) + maltotriose<br />
**[[5zce]] – GeAGS (mutant) + maltotetraose<br />
**[[5zce]] – GeAGS (mutant) + maltotetraose<br />
**[[7d9c]], [[7dch]], [[7ehh]], [[7ehi]] – WcAGS + carbohydrate<br />
**[[7r6j]], [[7rd2]], [[7rev]], [[7t66]], [[7t68]], [[7t8v]], [[8e3j]], [[8e3p]], [[8e4k]], [[8e5u]], [[8e6g]], [[8ecw]], [[8egv]], [[8ehp]], [[8eid]], [[8ekn]], [[8ele]], [[8epo]], [[8epr]], [[8eq7]], [[8eqx]], [[8er4]], [[8eud]], [[8eur]], [[8eut]], [[8eux]] – CtAGS + inhibitor <br />
*Lyosomal acid-alpha-glucosidase
**[[3ton]], [[5kzw]], [[5kzx]], [[5nn3]], [[5nn4]] – hAGS C-terminal - human<br />
**[[5nn8]] – hAGS + acarbose <br />
**[[7p2z]], [[7p32]], [[8cb1]] – hAGS + inhibitor <br />
**[[8cb6]] – hAGS + probe <br />
**[[5nn5]], [[5nn6]] – hAGS + jiromycin derivative<br />
*Neutral alpha-glucosidase
**[[8d43]], [[8emr]] – hAGS + glucosidase 2 subunit beta – Cryo EM<br />
**[[5f0e]], [[7l9e]] – mAGS + glucosidase subunit beta - mouse<br />
**[[5ied]], [[5iee]], [[5ief]], [[5ieg]] – mAGS + glucosidase subunit beta + inhibitor<br />
**[[7jty]], [[7k9n]], [[7k9o]], [[7k9q]], [[7k9t]], [[7kad]], [[7kb6]], [[7kb8]], [[7kbj]], [[7kbr]], [[7kry]] – mAGS (mutant) + glucosidase subunit beta + inhibitor<br />
**[[5hjo]] – mAGS + glucosidase subunit beta + substrate analog<br />
**[[5hjr]] – mAGS + glucosidase subunit beta + intermediate<br />
**[[5h9o]] – mAGS + glucosidase subunit beta + glucose<br />


*Alpha-glucosidase YIHQ
*Alpha-glucosidase YIHQ


**[[5ohs]] – RrYIHQ + sulfoquinovoside derivative – ''Rhizobium radiobacter''<br />
**[[5ohs]] – RrYIHQ + sulfoquinovoside derivative – ''Rhizobium radiobacter''<br />
**[[7ofx]] – RrYIHQ (mutant) + sulfoquinovoside derivative <br />
**[[5ohy]] – RrYIHQ + inhibitor<br />
**[[5ohy]] – RrYIHQ + inhibitor<br />
*Glucoside hydrolase family 31 alpha-glucosidase
**[[5x7o]], [[5x7s]] – PaAGS – ''Paenibacillus''<br />
**[[5x7p]] – PaAGS + acarbose<br />
**[[5x7q]] – PaAGS + maltohexasose<br />
**[[5x7r]] – PaAGS + isomaltohexasose<br />
**[[3nsx]] – RoAGS (mutant) – ''Ruminococcus obeum''<br />
**[[6c9x]], [[6c9z]] – RoAGS + voglibose <br />
**[[6ca1]], [[6ca3]] – RoAGS (mutant) + miglitol<br />
**[[6jr6]] – FjAGS – ''Flavobacterium johnsoniae''<br />
**[[6jr7]] – FjAGS + glucose <br />
**[[6jr8]] – FjAGS (mutant) + isomaltotriose<br />
**[[6pnr]] – AGS + inhibitor – ''Eubacterium rectale'' <br />


*Maltase  
*Maltase  


**[[3top]] – hAGS C-terminal + acarbose <br />
**[[3l4y]], [[3l4z]], [[3l4x]], [[3l4w]], [[3l4v]], [[3l4u]], [[3l4t]] – hAGS N-terminal + inhibitor<br />
**[[3w37]] – bAGS + acarbose <br />
**[[3wel]], [[3wem]], [[3wen]], [[3weo]] – bAGS + acarviosyl-maltooligosaccharide <br />
**[[1vjt]] – TmAGS + NAD – ''Thermotoga maritima''<br />
**[[1vjt]] – TmAGS + NAD – ''Thermotoga maritima''<br />
**[[1obb]] – TmAGS + NAD + maltose <br />
**[[1obb]] – TmAGS + NAD + maltose <br />
**[[2g3n]] – SsAGS + octylglucoside<br />
**[[2g3n]] – SsAGS + octylglucoside<br />
**[[3ton]], [[5kzw]], [[5kzx]], [[5nn3]], [[5nn4]]  – hAGS C-terminal - human<br />
**[[7p01]], [[7p07]] – AGS + carbohydrate ''Blastobotrys adeninivorans''<br />
**[[5nn8]] – hAGS + acarbose <br />
**[[3top]] – hAGS C-terminal + acarbose <br />
**[[3l4y]], [[3l4z]], [[3l4x]], [[3l4w]], [[3l4v]], [[3l4u]], [[3l4t]] – hAGS N-terminal + inhibitor<br />
**[[5nn5]], [[5nn6]] hAGS + jiromycin derivative<br />


*Maltase-glucoamylase
*Maltase-glucoamylase
Line 75: Line 104:
**[[3ctt]] – hAGS N-terminal catalytic subunit + casuarine<br />
**[[3ctt]] – hAGS N-terminal catalytic subunit + casuarine<br />


*Isomaltase or oligo-1,6-glucosidase
*Isomaltase or oligo-1,6-glucosidase or sucrase-isomaltase


**[[3lpo]] – hAGS N-terminal <br />
**[[3lpp]] – hAGS N-terminal + kotalanol<br />
**[[3a47]], [[3aj7]] – yAGS – yeast<br />
**[[3a47]], [[3aj7]] – yAGS – yeast<br />
**[[3a4a]], [[3axh]] – yAGS + glucose<br />
**[[3a4a]], [[3axh]] – yAGS + glucose<br />
**[[3axi]] – yAGS (mutant) + glucose<br />
**[[3axi]] – yAGS (mutant) + glucose<br />
**[[3n04]] – RoAGS – ''Ruminococcus obeum''<br />
**[[3n04]] – RoAGS <br />
**[[3nsx]], [[3nuk]] – RoAGS (mutant)<br />
**[[3nsx]], [[3nuk]] – RoAGS (mutant)<br />
**[[3pha]], [[3poc]] – RoAGS (mutant) + acarbose<br />
**[[3pha]], [[3poc]] – RoAGS (mutant) + acarbose<br />
Line 87: Line 118:
**[[4m56]] – BsAGS 1 + glucose <br />
**[[4m56]] – BsAGS 1 + glucose <br />
**[[5wcz]] – BsAGS 1 + deoxynojirimycin analog<br />
**[[5wcz]] – BsAGS 1 + deoxynojirimycin analog<br />
**[[1uok]] – AGS – Bacillus cereus<br />
**[[1uok]] – AGS – ''Bacillus cereus''<br />
 
*Sucrase–isomaltase
 
**[[3lpo]] – hAGS N-terminal <br />
**[[3lpp]] – hAGS N-terminal + kotalanol<br />


*Maltodextrin glucosidase  
*Maltodextrin glucosidase  


**[[5bn7]] – EcAGS <br />
**[[5bn7]], [[7vt9]] – EcAGS <br />


*6-phospho-α-glucosidase  
*6-phospho-α-glucosidase  
Line 105: Line 131:


*Glucan 1,4-alpha glucosidase or glucoamylase
*Glucan 1,4-alpha glucosidase or glucoamylase


**[[6frv]] – AnGAGS catalytic domain residues 25-640<br />
**[[6frv]] – AnGAGS catalytic domain residues 25-640<br />
Line 114: Line 139:
*Glucan 1,6-α-glucosidase or dextran glucosidase
*Glucan 1,6-α-glucosidase or dextran glucosidase


**[[4aie]] – GAGS – ''Lactobacillus acidophilus''<br />
**[[4aie]], [[6y9t]] – GAGS – ''Lactobacillus acidophilus''<br />
**[[2zic]], [[4xb3]] – SmGAGS (mutant) – ''Streptococcus mutans''<br />
**[[2zic]], [[4xb3]] – SmGAGS (mutant) – ''Streptococcus mutans''<br />
**[[4wlc]] – SmGAGS + glucose <br />
**[[4wlc]] – SmGAGS + glucose <br />
Line 122: Line 147:


}}
}}
 
[[Category: Topic Page]]
==Your Heading Here (maybe something like 'Structure')==
<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
This is a default text for your page '''Alpha-glucosidase 3D structures'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
 
== Function ==
 
== Disease ==
 
== Relevance ==
 
== Structural highlights ==
 
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
 
</StructureSection>
== References ==
<references/>

Latest revision as of 11:49, 23 September 2024

3D structures of Alpha-glucosidase3D structures of Alpha-glucosidase

Updated on 23-September-2024

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel