Transcription initiation factor

Revision as of 14:51, 18 November 2012 by Michal Harel (talk | contribs)


Transcription initiation factors (TFII) are proteins which enable RNA polymerase II to bind to the DNA template in order to start the transcription process. TFIID recognizes the promoter sequence on the DNA while TFIIB bridges between TFIID and RNA polymerase II. TFIIA is one of several TFs which are required for transcription. TFIIA aids in binding the TATA-binding protein (TBP) to the TATA box containing sequence of the DNA.

3D structures of transcription initiation factors

TFIIA

1ytf – TFIIA + TBP + DNA – yeast

TFIIB

1pft – TFIIB N terminal – Pyrococcus furiosus – NMR

1tfb – hTFIIB – human - NMR
1vol, 1c9b – hTFIIB + TBP + DNA
1ais, 1d3u - TFIIB C terminal + TBP + DNA – Pyrococcus woesei

TFIID

1bh8 – hTFIID

1tba – TFIID – Drosophila melanogaster - NMR
1bh9 – hTFIID + PCMBS
1qn3, 1qn4, 1qn5, 1qn6, 1qn7, 1qn8, 1qn9, 1qna, 1qnb, 1qnc – TFIID + DNA – Arabidopsis thaliana





Structure of human TFIIB (grey) complex with TATA-binding protein (green) and DNA (PDB entry 1vol)

Drag the structure with the mouse to rotate

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Michal Harel, Alexander Berchansky, Joel L. Sussman