1jbg: Difference between revisions
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<StructureSection load='1jbg' size='340' side='right'caption='[[1jbg]], [[Resolution|resolution]] 2.75Å' scene=''> | <StructureSection load='1jbg' size='340' side='right'caption='[[1jbg]], [[Resolution|resolution]] 2.75Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1jbg]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[1jbg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JBG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JBG FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jbg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jbg OCA], [https://pdbe.org/1jbg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jbg RCSB], [https://www.ebi.ac.uk/pdbsum/1jbg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jbg ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[[ | [[https://www.uniprot.org/uniprot/MTA_BACSU MTA_BACSU]] Global transcriptional regulator that activates transcription of bmr and blt by binding directly to their promoter. Stimulates also the expression of the mta gene itself, ydfK and ymfE.<ref>PMID:10200972</ref> <ref>PMID:18502870</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
*[[Transcriptional activator|Transcriptional activator]] | *[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
Revision as of 09:38, 11 August 2021
Crystal Structure of MtaN, the Bacillus subtilis Multidrug Transporter Activator, N-terminusCrystal Structure of MtaN, the Bacillus subtilis Multidrug Transporter Activator, N-terminus
Structural highlights
Function[MTA_BACSU] Global transcriptional regulator that activates transcription of bmr and blt by binding directly to their promoter. Stimulates also the expression of the mta gene itself, ydfK and ymfE.[1] [2] Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. Publication Abstract from PubMedMtaN (Multidrug Transporter Activation, N terminus) is a constitutive, transcriptionally active 109-residue truncation mutant, which contains only the N-terminal DNA-binding and dimerization domains of MerR family member Mta. The 2.75 A resolution crystal structure of apo-MtaN reveals a winged helix-turn-helix protein with a protruding 8-turn helix (alpha5) that is involved in dimerization by the formation of an antiparallel coiled-coil. The hydrophobic core and helices alpha1 through alpha4 are structurally homologous to MerR family member BmrR bound to DNA, whereas one wing (Wing 1) is shifted. Differences between the orientation of alpha5 with respect to the core and the revolution of the antiparallel coiled-coil lead to significantly altered conformations of MtaN and BmrR dimers. These shifts result in a conformation of MtaN that appears to be incompatible with the transcription activation mechanism of BmrR and suggest that additional DNA-induced structural changes are necessary. Crystal structure of MtaN, a global multidrug transporter gene activator.,Godsey MH, Baranova NN, Neyfakh AA, Brennan RG J Biol Chem. 2001 Dec 14;276(50):47178-84. Epub 2001 Oct 1. PMID:11581256[3] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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