Actin 3D structures: Difference between revisions

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**[[3hbt]], [[2zwh]], [[1nwk]], [[1j6z]], [[3g37]], [[2y83]] – rAa – rabbit<br />
**[[3hbt]], [[2zwh]], [[1nwk]], [[1j6z]], [[3g37]], [[2y83]] – rAa – rabbit<br />
**[[2q1n]], [[2q31]], [[2a5x]], [[1rdw]], [[1rfq]], [[1lcu]] – rAa – dimer<br />
**[[2q1n]], [[2q31]], [[2a5x]], [[1rdw]], [[1rfq]], [[1lcu]] – rAa – dimer<br />
**[[3mfp]], [[4a7n]], [[3jbj]], [[6bnu]] – rAa + ADP – Cryo EM<br />
**[[2hmp]] – rAa – protease cleaved<br />
**[[2hmp]] – rAa – protease cleaved<br />
**[[2zwh]], [[2gwj]], [[2gwk]] – rAa-ATP<br />
**[[2zwh]], [[2gwj]], [[2gwk]] – rAa-ATP<br />
**[[3j8i]], [[3j8j]], [[3j8k]], [[6bno]], [[6avb]], [[6av9]], [[5mvy]], [[5mva]], [[6fhl]], [[5oof]], [[5ooe]], [[5ood]], [[5ooc]], [[5onv]] – rAa + ADP – Cryo EM<br />
**[[3b5u]] – rAa filament – fiber diffraction<br />
**[[3b5u]] – rAa filament – fiber diffraction<br />


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**[[4k41]], [[1qz6]], [[1s22]], [[4k42]], [[4k43]], [[2asm]], [[2asp]], [[2aso]], [[1yxq]], [[1s22]], [[3m6g]], [[6mgo]] - rAa+ macrolide<br />
**[[4k41]], [[1qz6]], [[1s22]], [[4k42]], [[4k43]], [[2asm]], [[2asp]], [[2aso]], [[1yxq]], [[1s22]], [[3m6g]], [[6mgo]] - rAa+ macrolide<br />
**[[1qz6]] – rAa+jaspisamide A<br />
**[[1qz6]] – rAa+jaspisamide A<br />
**[[6qri]] – rAa+ chivosazole<br />
**[[3mfp]], [[4a7n]], [[3jbj]], [[6bnu]], [[3j8i]], [[3j8j]], [[3j8k]], [[6bno]], [[6avb]], [[6av9]], [[5mvy]], [[5mva]], [[6fhl]], [[5oof]], [[5ooe]], [[5ood]], [[5ooc]], [[5onv]], [[6t23]], [[6t24]], [[6vau]] – rAa + ADP – Cryo EM<br />
**[[6kll]], [[6kln]] – mAa + ADP – mouse - Cryo EM <br />
**[[6djm]] – cAa + AMPPNP - Cryo EM <br />
**[[6djn]], [[6djo]], [[7bt7]] – cAa + ADP - Cryo EM <br />
**[[6iug]] – Aa + ADP – maize - Cryo EM <br />
**[[5ogw]] – PfAa + jasplakinolide + ADP – Cryo EM <br />
**[[5ogw]] – PfAa + jasplakinolide + ADP – Cryo EM <br />
**[[6bqw]] – Aa + AMPPNP – ''Bacillus subtilis'' - Cryo EM <br />
**[[6bqw]] – Aa + AMPPNP – ''Bacillus subtilis'' - Cryo EM <br />
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**[[4a7f]], [[4a7h]], [[4a7l]], [[5h53]], [[5kg8]] – rAa + tropomyosin α-1 + myosin heavy chain (mutant) – Cryo EM<br />
**[[4a7f]], [[4a7h]], [[4a7l]], [[5h53]], [[5kg8]] – rAa + tropomyosin α-1 + myosin heavy chain (mutant) – Cryo EM<br />
**[[5jlf]], [[3j8a]] – rAa + tropomyosin alpha-1 + ADP – Cryo EM<br />
**[[5jlf]], [[3j8a]] – rAa + tropomyosin alpha-1 + ADP – Cryo EM<br />
**[[6kn7]], [[6kn8]] – rAa + tropomyosin alpha-1 + Troponin + ADP – Cryo EM<br />
**[[6c1h]], [[6c1g]], [[6c1d]] - rAa + myosin + calmodulin<br />
**[[6c1h]], [[6c1g]], [[6c1d]] - rAa + myosin + calmodulin<br />
**[[6bnv]] - rAa + myosin + calmodulin – Cryo EM<br />
**[[6bnv]] - rAa + myosin + calmodulin – Cryo EM<br />
**[[6bnw]], [[6bnp]] - rAa + myosin – Cryo EM<br />
**[[6bnw]], [[6bnp]], [[6bih]] - rAa + myosin – Cryo EM<br />
**[[6bnq]], [[6blh]] - rAa + myosin + ADP – Cryo EM<br />
**[[6bnq]], [[6blh]] - rAa + myosin + ADP – Cryo EM<br />
**[[2v51]], [[2v52]], [[2yje]], [[2yjf]] – rAa+mMKL/Myocardin-like protein <br />
**[[2v51]], [[2v52]], [[2yje]], [[2yjf]] – rAa+mMKL/Myocardin-like protein <br />
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**[[4eah]] – rAa + formin-like protein 3 FH2 domain<br />
**[[4eah]] – rAa + formin-like protein 3 FH2 domain<br />
**[[3daw]] – rAa+mTwinfilin-1<br />
**[[3daw]] – rAa+mTwinfilin-1<br />
**[[6rsw]] – rAa + mTwinfilin-1 + CAP-1 + ADP<br />
**[[3buz]] – rAa+Iota toxin component IA<br />
**[[3buz]] – rAa+Iota toxin component IA<br />
**[[4b1u]], [[4b1v]], [[4b1w]], [[4b1x]], [[4b1y]], [[4b1z]] – rAa + phosphatase and actin regulator<br />
**[[4b1u]], [[4b1v]], [[4b1w]], [[4b1x]], [[4b1y]], [[4b1z]] – rAa + phosphatase and actin regulator<br />
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**[[2d1k]] - rAa+hWH2 domain of MIN+cDNase I<br />
**[[2d1k]] - rAa+hWH2 domain of MIN+cDNase I<br />
**[[2pbd]], [[5zzb]], [[5zza]], [[5yee]] – rAa+hProfilin-1<br />
**[[2pbd]], [[5zzb]], [[5zza]], [[5yee]] – rAa+hProfilin-1<br />
**[[6nas]], [[6nbe]], [[6nbw]] – rAa + hProfilin-1 + acetyltransferase + acetyl CoA + ATP<br />
**[[2pav]] - rAa+hProfilin-1+hVASP<br />
**[[2pav]] - rAa+hProfilin-1+hVASP<br />
**[[2q97]] – rAa+toxofilin – ''Toxoplasma gondii''<br />
**[[2q97]] – rAa+toxofilin – ''Toxoplasma gondii''<br />
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**[[3jbi]] – rAa + vinculin - CryoEM <br />
**[[3jbi]] – rAa + vinculin - CryoEM <br />
**[[3jbk]] – rAa + metavinculin + ADP - CryoEM <br />
**[[3jbk]] – rAa + metavinculin + ADP - CryoEM <br />
**[[6t1y]], [[6t20]], [[6t25]], [[6u96] – rAa + phalloidin + ADP - CryoEM <br />
**[[4wyb]] – rAa + BUD6 <br />
**[[4wyb]] – rAa + BUD6 <br />
**[[4v0u]] – rAa + protein phosphatase 1 +serine/threonine protein phosphatase <br />
**[[4v0u]] – rAa + protein phosphatase 1 +serine/threonine protein phosphatase <br />
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**[[4h03]], [[4h0v]], [[4h0x]], [[4h0y]] – rAa + ι toxin component IA + NAD<br />
**[[4h03]], [[4h0v]], [[4h0x]], [[4h0y]] – rAa + ι toxin component IA + NAD<br />
**[[5ypu]] – rAa + protein cordon-bleu WH2 domain<br />
**[[5ypu]] – rAa + protein cordon-bleu WH2 domain<br />
**[[6jbk]], [[6jcu]], [[6jh8]], [[6jh9]] – rAa + protein cordon-bleu peptide<br />
**[[6gvc]] – rAa + Rho GTPase-activating protein <br />
**[[6uby]], [[6uc0]], [[6uc4]], [[6vao]] – rAa + cofilin 1 + ADP – Cryo EM<br />
**[[2w49]] – cAa +troponin C+ troponin T+ troponin I+ tropomyosin α-1 <br />
**[[2w49]] – cAa +troponin C+ troponin T+ troponin I+ tropomyosin α-1 <br />
**[[3j4k]] - cAa + tropomyosin<br />
**[[3j4k]] - cAa + tropomyosin<br />
**[[7bti]] - cAa + phalloidin + ADP – Cryo EM<br />
**[[6d8c]] - cAa + filamin + phalloidin – Cryo EM<br />
**[[6d8c]] - cAa + filamin + phalloidin – Cryo EM<br />
**[[5yu8]] – cAa + cofilin 2<br />
**[[5yu8]] – cAa + cofilin 2<br />
**[[6m5g]] - cAa + utrophin + ADP – Cryo EM<br />
**[[7bte]] - cAa + lifeact + ADP – Cryo EM<br />
**[[5ce3]], [[4ci6]] – Aa + protein kinase YopO – fall armyworm <br />
**[[5ce3]], [[4ci6]] – Aa + protein kinase YopO – fall armyworm <br />
**[[5i9e]] – yAa + actin-related protein 4 + helicase <br />
**[[5i9e]] – yAa + actin-related protein 4 + helicase <br />
**[[6i4d]] – PfAa + mGelsolin<br />
**[[6i4e]], [[6i4m]] – PfAa + mGelsolin + ADP<br />
**[[6i4i]], [[6i4j]] – PfAa (mutant) + mGelsolin + ADP<br />
**[[6i4f]], [[6i4l]] – PfAa (mutant) + mGelsolin + ATP + ADP<br />
**[[6i4g]], [[6i4h]], [[6i4k]] – PfAa (mutant) + mGelsolin + ATP <br />


* β actin (Ab)  
* β actin (Ab)  

Revision as of 11:35, 28 May 2020

3D Structures of Actin3D Structures of Actin

Updated on 28-May-2020 {{#tree:id=OrganizedByTopic|openlevels=0|

  • α actin 1 (Aa)
  • α actin 1 complex with gelsolin
    • 2ff3 - rAa+ hGelsolin +domains of hWASP
    • 1eqy, 3cjb, 1p8z, 3ffk, 3tu5, 4pkg, 4pkh, 4pki – rAa+hGelsolin
    • 1rgi - rAa+hoGelsolin – horse (ho)
    • 1t44 - rAa+hGelsolin/mThymosin β-4
    • 4z94 - rAa+hGelsolin/tropomodulin/leiomodin
    • 2ff6 - rAa+DmCiboulot+hGelsolin
    • 1mdu – cAa+hGelsolin - chicken
    • 4cbu, 5mvv – PfAa + gelsolin – Plasmodium falciparum
    • 4cbw – PbAa + gelsolin – Plasmodium berghei
  • α actin 1 complex with small molecule
  • α actin 1 complex with protein
    • 6fm2 – hAa + adenylyl cyclase-asociated protein
    • 5nol, 5noj, 5nog – Aa + tropomyosin alpha-1 + ADP – pig - Cryo EM
    • 3j8a - mAa + tropomyosin - mouse
    • 4a7f, 4a7h, 4a7l, 5h53, 5kg8 – rAa + tropomyosin α-1 + myosin heavy chain (mutant) – Cryo EM
    • 5jlf, 3j8a – rAa + tropomyosin alpha-1 + ADP – Cryo EM
    • 6kn7, 6kn8 – rAa + tropomyosin alpha-1 + Troponin + ADP – Cryo EM
    • 6c1h, 6c1g, 6c1d - rAa + myosin + calmodulin
    • 6bnv - rAa + myosin + calmodulin – Cryo EM
    • 6bnw, 6bnp, 6bih - rAa + myosin – Cryo EM
    • 6bnq, 6blh - rAa + myosin + ADP – Cryo EM
    • 2v51, 2v52, 2yje, 2yjf – rAa+mMKL/Myocardin-like protein
    • 2vcp – rAa+ neural wiskott-aldrich syndrome protein (hWASP) – human (h)
    • 2a3z, 2a40, 2a41 – rAa+cDNase I+domains of hWASP – cow (c)
    • 2a42 – rAa+cDNase I
    • 4eah – rAa + formin-like protein 3 FH2 domain
    • 3daw – rAa+mTwinfilin-1
    • 6rsw – rAa + mTwinfilin-1 + CAP-1 + ADP
    • 3buz – rAa+Iota toxin component IA
    • 4b1u, 4b1v, 4b1w, 4b1x, 4b1y, 4b1z – rAa + phosphatase and actin regulator
    • 4pl8 - rAa+ Thymosin β-4
    • 3u8x - rAa+DmThymosin β-4 - Drosophila melanogaster
    • 1esv - rAa+hGelsolin+ latrunculin A
    • 3cjc - rAa+hGelsolin+cDNase I
    • 2d1k - rAa+hWH2 domain of MIN+cDNase I
    • 2pbd, 5zzb, 5zza, 5yee – rAa+hProfilin-1
    • 6nas, 6nbe, 6nbw – rAa + hProfilin-1 + acetyltransferase + acetyl CoA + ATP
    • 2pav - rAa+hProfilin-1+hVASP
    • 2q97 – rAa+toxofilin – Toxoplasma gondii
    • 2q0r – rAa+pectenotoxin-2
    • 2q0u - rAa+pectenotoxin-2+latrunculin B
    • 1y64 – rAa+yBNI1 domain FH2 - yeast
    • 1sqk – rAa+DmCiboulot
    • 3sjh, 3u9d, 3u9z - rAa+DmCiboulot thymosin β-4 domain
    • 3mn5 – rAa+ DmSpire WH2 domain
    • 1lot, 1kxp, 1ma9 – rAa+hVitamin D binding protein
    • 3m1f – rAa+VOPL WH2 domain
    • 3m3n – rAa+mN-WASP
    • 3tpq – rAa + MAL RPEL domain
    • 3ue5 – rAa + spire domain D
    • 4gy2 – rAa + ι toxin component IA
    • 3jbi – rAa + vinculin - CryoEM
    • 3jbk – rAa + metavinculin + ADP - CryoEM
    • 6t1y, 6t20, 6t25, [[6u96] – rAa + phalloidin + ADP - CryoEM
    • 4wyb – rAa + BUD6
    • 4v0u – rAa + protein phosphatase 1 +serine/threonine protein phosphatase
    • 4h0t – rAa + ι toxin component IA + ADPR
    • 4h03, 4h0v, 4h0x, 4h0y – rAa + ι toxin component IA + NAD
    • 5ypu – rAa + protein cordon-bleu WH2 domain
    • 6jbk, 6jcu, 6jh8, 6jh9 – rAa + protein cordon-bleu peptide
    • 6gvc – rAa + Rho GTPase-activating protein
    • 6uby, 6uc0, 6uc4, 6vao – rAa + cofilin 1 + ADP – Cryo EM
    • 2w49 – cAa +troponin C+ troponin T+ troponin I+ tropomyosin α-1
    • 3j4k - cAa + tropomyosin
    • 7bti - cAa + phalloidin + ADP – Cryo EM
    • 6d8c - cAa + filamin + phalloidin – Cryo EM
    • 5yu8 – cAa + cofilin 2
    • 6m5g - cAa + utrophin + ADP – Cryo EM
    • 7bte - cAa + lifeact + ADP – Cryo EM
    • 5ce3, 4ci6 – Aa + protein kinase YopO – fall armyworm
    • 5i9e – yAa + actin-related protein 4 + helicase
    • 6i4d – PfAa + mGelsolin
    • 6i4e, 6i4m – PfAa + mGelsolin + ADP
    • 6i4i, 6i4j – PfAa (mutant) + mGelsolin + ADP
    • 6i4f, 6i4l – PfAa (mutant) + mGelsolin + ATP + ADP
    • 6i4g, 6i4h, 6i4k – PfAa (mutant) + mGelsolin + ATP
  • β actin (Ab)
    • 3lue – hAb+hAlpha-actinin
    • 3byh – hAb+hFimbrin ABD2 – Cryo EM
    • 3j82 – hAb + DNGR-1 - CryoEM
    • 6anu – hAb + spectrin – Cryo EM
    • 3u4l, 3ub5 – Ab + profilin-1 - bovine
    • 2oan – cAb
    • 3j0s – cAb + cofilin 2
    • 4cbx – PbAb + gelsolin
  • γ 1 actin (Ag)
  • Actin 5C (A5C)
    • 4rwt, 5wfn – DmA5C + leiomodin
    • 3eks – DmAg 5c (mutant)
    • 3eku – DmAg 5c (mutant)+cytochalasin D
    • 3el2, 2hf4 - DmAg 5c (mutant)+Ca-ATP
    • 2hf3 - DmAg 5c (mutant)+Ca-ADP
    • 3mmv – DmA-5C+spire WH2 domain
    • 3mn6, 3mn7, 3mn9 - DmA-5C (mutant)+spire
    • 4jhd – DmAg 5c + protein cordon-bleu WH2 domain
    • 4efh – A + spire domains C,D – Acanthamoeba castellanii

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel