Chemotaxis protein: Difference between revisions

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===CheY===
===CheY===
[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]] – EcCheY (mutant) – ''Escherichia coli''<BR />
[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]] – EcCheY (mutant) – ''Escherichia coli''<BR />
[[3f7n]], [[3fft]], [[3ffw]], [[3ffx]], [[3fgz]], [[3myy]], [[3olv]], [[3olw]], [[3olx]], [[3oly]] - EcCheY (mutant) + BeF3 + Mn<BR />
[[1tmy]], [[2tmy]], [[3tmy]], [[4tmy]] - TmCheY – ''Thermotoga maritima''<br />
[[4h60]], [[4hnr]] – VcCheY – ''Vibrio cholerae''<br />
[[4hnq]] - VcCheY (mutant) <br />
[[3gwg]] – HpCheY -  ''Helicobacter pylori''<BR />
[[3h1f]], [[3h1g]] - HpCheY (mutant) <BR />
[[2id7]], [[2id9]], [[2idm]] – EcCheY-phosphono (mutant) <BR />
[[2id7]], [[2id9]], [[2idm]] – EcCheY-phosphono (mutant) <BR />
[[1djm]] – EcCheY – NMR<BR />
[[1djm]] – EcCheY – NMR<BR />
[[2chy]] – StCheY - ''Salmonella typhimurium'' <br />
''CheY complexes''
[[1zdm]] – EcCheY + Xe<BR />
[[1zdm]] – EcCheY + Xe<BR />
[[3gwg]] – HpCheY -  ''Helicobacter pylori''<BR />
[[3h1f]], [[3h1g]] - HpCheY (mutant) <BR />
[[3h1e]] - HpCheY  + BeF3 + Mn<BR />
[[3h1e]] - HpCheY  + BeF3 + Mn<BR />
[[3f7n]], [[3fft]], [[3ffw]], [[3ffx]], [[3fgz]], [[3myy]], [[3olv]], [[3olw]], [[3olx]], [[3oly]] - EcCheY (mutant) + BeF3 + Mn<BR />
[[4hns]] - VcCheY + BeF3 + Mg<br />
[[4lx8]] - VcCheY + Mg<br />
[[1fqw]] - EcCheY  + BeF3 + Mn<br />
[[3rvj]], [[3rvk]], [[3rvl]], [[3rvm]], [[3rvn]], [[3rvo]], [[3rvp]], [[3rvq]], [[3rvr]], [[3rvs]] - EcCheY (mutant) + BeF3 + Mn<br />
[[1bdj]] – EcCheY + aerobic respiration control protein HPT domain<BR />
[[1bdj]] – EcCheY + aerobic respiration control protein HPT domain<BR />
[[1u8t]] – EcCheY + flagellar motor switch protein FLIM<BR />
[[1u8t]] – EcCheY + flagellar motor switch protein FLIM<BR />
[[2b1j]] - EcCheY + flagellar motor switch protein FLIM N terminal<br />
[[2b1j]], [[1f4v]] - EcCheY + flagellar motor switch protein FLIM N terminal<br />
[[1ffg]], [[1ffs]] – EcCheY + CheA CheY-binding domain<BR />
[[1ffg]], [[1ffs]] – EcCheY + CheA CheY-binding domain<BR />
[[1u0s]] - TmCheY response regulating domain + CheA P2 domain –''Thermotoga maritima''<BR />
[[1u0s]] - TmCheY response regulating domain + CheA P2 domain <BR />
[[1ffw]] – EcCheY + CheA CheY-binding domain + imido phosphate<BR />
[[1ffw]] – EcCheY + CheA CheY-binding domain + imido phosphate<BR />
[[1kmi]] - EcCheY + CheZ<BR />
[[1kmi]] - EcCheY + CheZ<BR />
[[2fka]], [[2flk]], [[2flw]], [[2fmf]], [[2fmh]], [[2fmi]], [[2fmk]], [[2pl9]], [[2pmc]] – StCheY + CheZ  peptide - ''Salmonella typhimurium''<BR />
[[2lp4]] - EcCheY + CheA<br />
[[2fka]], [[2flk]], [[2flw]], [[2fmf]], [[2fmh]], [[2fmi]], [[2fmk]], [[2pl9]], [[2pmc]] – StCheY + CheZ  peptide <BR />
[[2che]], [[2chf]] – StCheY + Mg<br />
[[4iga]] - TmCheY + flagellar motor switch protein FLIM peptide<br />
 
===CheX===
===CheX===
[[1xko]]– TmCheX<BR />
[[1xko]]– TmCheX<BR />
[[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR />
[[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR />
[[3hzh]] – CheX + Che-3 – ''Borrelia burgdorferi''<br />
===CheC===
===CheC===
[[1xkr]] – TmCheC<BR />
[[1xkr]] – TmCheC<BR />
[[2f9z]] – TmCheC + CheD<BR />
[[2f9z]] – TmCheC + CheD<BR />
[[3qta]] – CheC – ''Haloarcula marismortui''<BR />
[[3qta]] – CheC – ''Haloarcula marismortui''<BR />
===CheR===
===CheR===
[[1bc5]] – StCheR + chemotaxis receptor peptide <BR />
[[1bc5]] – StCheR + chemotaxis receptor peptide <BR />
[[1af7]] – StCheR<br />
===CheA===
===CheA===
[[1fwp]] – EcCheA – NMR<br />
[[1b3q]] – TmCheA dimerization, kinase and regulatory domains <BR />
[[1b3q]] – TmCheA dimerization, kinase and regulatory domains <BR />
[[1i5n]] – StCheA P1 domain<br />
[[1i5n]] – StCheA P1 domain<br />
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[[1tqg]] – TmCheA phosphotransferase domain<br />
[[1tqg]] – TmCheA phosphotransferase domain<br />
[[2ld6]] – TmCheA HPT domain - NMR<BR />
[[2ld6]] – TmCheA HPT domain - NMR<BR />
[[2ch4]] - TmCheA kinase and regulatory domains + CheW
[[2ch4]] - TmCheA kinase and regulatory domains + CheW<br />
[[3ur1]], [[4jpb]] – TmCheA + CheW + methyl-accepting Che<br />
 
===CheB===
 
[[1a2o]], [[1chd]]– StCheB<br />
 
===CheW===
===CheW===
[[1k0s]] – TmCheW<br />
[[1k0s]] – TmCheW<br />
[[2h09]] – EcCheW - NMR<BR />
[[2ho9]] – EcCheW - NMR<BR />
 
===Aspartate chemotaxis receptor===
 
[[1jmw]], [[1vls]] – StChe LBD<br />
[[1lih]] – StChe LBD (mutant)<br />
[[1was]] – StChe LBD<br />
[[1wat]], [[1vlt]], [[2lig]] – StChe LBD + aspartate<br />
[[2asr]] – EcChe <br />
 
===Methyl-accepting chemotaxis protein===
===Methyl-accepting chemotaxis protein===
[[1xbn]] – TtMche – ''Thermoanaerobacter tengcongensis''<BR />
[[1xbn]] – TtMche – ''Thermoanaerobacter tengcongensis''<BR />
[[2m7u]], [[2m7v]] – TeMche – ''Thermosynechococcus elongatus''<br />
[[3vv4]] – TeMche GAF domain<br />
[[4fof]], [[4glq]] – TeMche GAF domain (mutant)<br />
[[3w2z – Mche residues 221-397 – Nostoc<br />
[[3eee]], [[3iqb]], [[3lah]], [[3lai]], [[3sj5]] – TtMche H-Nox domain (mutant) <BR />
[[3eee]], [[3iqb]], [[3lah]], [[3lai]], [[3sj5]] – TtMche H-Nox domain (mutant) <BR />
[[3tf0]], [[3tf1]] - TtMche H-Nox domain<BR />
[[3tf0]], [[3tf1]], [[1u4h]], [[1u55]], [[1u56]] - TtMche H-Nox domain<BR />
[[3m0b]] - TtMche H-Nox domain Ru-porphyrin<BR />
[[3m0b]] - TtMche H-Nox domain Ru-porphyrin<BR />
[[3nvr]], [[3nvu]] – TtMche N terminal (mutant) <BR />
[[3nvr]], [[3nvu]] – TtMche N terminal (mutant) <BR />
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[[3g6b]] – TmMche (mutant) <BR />
[[3g6b]] – TmMche (mutant) <BR />
[[2ch7]] – TmMche cytoplasmic domain<BR />
[[2ch7]] – TmMche cytoplasmic domain<BR />
[[1qu7]], [[2l9g]] – EcCheI cytoplasmic domain<BR />
[[1qu7]], [[2l9g]] – EcMcheI cytoplasmic domain<BR />
[[2ld6]] – EcChe peptide - NMR<BR />
[[2ld6]] – EcMche peptide - NMR<BR />
[[3atp]] -  EcCheI ligand-binding domain + serine<BR />
[[3atp]] -  EcMcheI LBD + serine<BR />
[[1jmw]] - StChe ligand-binding domain (mutant) <BR />
[[2d4u]] – EcMcheI LBD (mutant)<br />
[[2qhk]] – Che residues 31-203 – ''Vibrio parahaemolyticus''<BR />
[[1jmw]] - StMche LBD (mutant) <BR />
[[3c8c]] – Che N-terminal – ''Vibrio cholerae''<BR />
[[2qhk]], [[4exo]] – Mche N-terminal – ''Vibrio parahaemolyticus''<BR />
[[3b47]] – Che periplasmic domain – ''Geobacter sulfurreducens''<BR />
[[3c8c]] – Mche N-terminal <BR />
[[3b47]] – Mche periplasmic domain – ''Geobacter sulfurreducens''<BR />
[[4it2]] - Mche H-Nox domain Mn-porphyrin – ''Caldanaerobacter subterraneus''<br />
 
===Flagellar motor protein FLIN===
===Flagellar motor protein FLIN===
[[1yab]] – TmFLIN<BR />
[[1yab]] – TmFLIN<BR />
===Chemotaxis protein MotB===
===Chemotaxis protein MotB===
[[3cyp]], [[3imp]] – HpMotB C terminal<br />  
 
[[3cyp]], [[3imp]], [[3s02]], [[3s03]], [[3s06]], [[3s0h]], [[3s0w]], [[3s0y]] – HpMotB C terminal<br />  
[[3cyq]] – HpMotB C terminal + N-acetylmuramic acid<BR />
[[3cyq]] – HpMotB C terminal + N-acetylmuramic acid<BR />
[[2zov]], [[2zvy]], [[2zvz]] - StMotB C terminal<br />
[[2zov]], [[2zvy]], [[2zvz]] - StMotB C terminal<br />
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 10:45, 20 February 2014

Template:STRUCTURE 1e6m

Chemotaxis proteins direct cell movement according to certain chemicals in their environment. For details on chemotaxis protein see

3D structures of chemotaxis protein3D structures of chemotaxis protein

Updated on 20-February-2014

CheYCheY

1ab6, 1d4z, 1e6m, 1e6k, 1e6l, 1jbe, 1mih, 3oo0, 3oo1 – EcCheY (mutant) – Escherichia coli
1tmy, 2tmy, 3tmy, 4tmy - TmCheY – Thermotoga maritima
4h60, 4hnr – VcCheY – Vibrio cholerae
4hnq - VcCheY (mutant)
3gwg – HpCheY - Helicobacter pylori
3h1f, 3h1g - HpCheY (mutant)
2id7, 2id9, 2idm – EcCheY-phosphono (mutant)
1djm – EcCheY – NMR
2chy – StCheY - Salmonella typhimurium

CheY complexes

1zdm – EcCheY + Xe
3h1e - HpCheY + BeF3 + Mn
3f7n, 3fft, 3ffw, 3ffx, 3fgz, 3myy, 3olv, 3olw, 3olx, 3oly - EcCheY (mutant) + BeF3 + Mn
4hns - VcCheY + BeF3 + Mg
4lx8 - VcCheY + Mg
1fqw - EcCheY + BeF3 + Mn
3rvj, 3rvk, 3rvl, 3rvm, 3rvn, 3rvo, 3rvp, 3rvq, 3rvr, 3rvs - EcCheY (mutant) + BeF3 + Mn
1bdj – EcCheY + aerobic respiration control protein HPT domain
1u8t – EcCheY + flagellar motor switch protein FLIM
2b1j, 1f4v - EcCheY + flagellar motor switch protein FLIM N terminal
1ffg, 1ffs – EcCheY + CheA CheY-binding domain
1u0s - TmCheY response regulating domain + CheA P2 domain
1ffw – EcCheY + CheA CheY-binding domain + imido phosphate
1kmi - EcCheY + CheZ
2lp4 - EcCheY + CheA
2fka, 2flk, 2flw, 2fmf, 2fmh, 2fmi, 2fmk, 2pl9, 2pmc – StCheY + CheZ peptide
2che, 2chf – StCheY + Mg
4iga - TmCheY + flagellar motor switch protein FLIM peptide

CheXCheX

1xko– TmCheX
3hm4 – CheX – Desulfovibrio desulfuricans
3hzh – CheX + Che-3 – Borrelia burgdorferi

CheCCheC

1xkr – TmCheC
2f9z – TmCheC + CheD
3qta – CheC – Haloarcula marismortui

CheRCheR

1bc5 – StCheR + chemotaxis receptor peptide
1af7 – StCheR

CheACheA

1fwp – EcCheA – NMR
1b3q – TmCheA dimerization, kinase and regulatory domains
1i5n – StCheA P1 domain
1i58, 1i59, 1i5a, 1i5b, 1i5d - TmCheA P4 domain + ATP analog
1i5c - TmCheA P4 domain (mutant) + ADP
1tqg – TmCheA phosphotransferase domain
2ld6 – TmCheA HPT domain - NMR
2ch4 - TmCheA kinase and regulatory domains + CheW
3ur1, 4jpb – TmCheA + CheW + methyl-accepting Che

CheBCheB

1a2o, 1chd– StCheB

CheWCheW

1k0s – TmCheW
2ho9 – EcCheW - NMR

Aspartate chemotaxis receptorAspartate chemotaxis receptor

1jmw, 1vls – StChe LBD
1lih – StChe LBD (mutant)
1was – StChe LBD
1wat, 1vlt, 2lig – StChe LBD + aspartate
2asr – EcChe

Methyl-accepting chemotaxis proteinMethyl-accepting chemotaxis protein

1xbn – TtMche – Thermoanaerobacter tengcongensis
2m7u, 2m7v – TeMche – Thermosynechococcus elongatus
3vv4 – TeMche GAF domain
4fof, 4glq – TeMche GAF domain (mutant)
[[3w2z – Mche residues 221-397 – Nostoc
3eee, 3iqb, 3lah, 3lai, 3sj5 – TtMche H-Nox domain (mutant)
3tf0, 3tf1, 1u4h, 1u55, 1u56 - TtMche H-Nox domain
3m0b - TtMche H-Nox domain Ru-porphyrin
3nvr, 3nvu – TtMche N terminal (mutant)
3g67 – TmMche
3g6b – TmMche (mutant)
2ch7 – TmMche cytoplasmic domain
1qu7, 2l9g – EcMcheI cytoplasmic domain
2ld6 – EcMche peptide - NMR
3atp - EcMcheI LBD + serine
2d4u – EcMcheI LBD (mutant)
1jmw - StMche LBD (mutant)
2qhk, 4exo – Mche N-terminal – Vibrio parahaemolyticus
3c8c – Mche N-terminal
3b47 – Mche periplasmic domain – Geobacter sulfurreducens
4it2 - Mche H-Nox domain Mn-porphyrin – Caldanaerobacter subterraneus

Flagellar motor protein FLINFlagellar motor protein FLIN

1yab – TmFLIN

Chemotaxis protein MotBChemotaxis protein MotB

3cyp, 3imp, 3s02, 3s03, 3s06, 3s0h, 3s0w, 3s0y – HpMotB C terminal
3cyq – HpMotB C terminal + N-acetylmuramic acid
2zov, 2zvy, 2zvz - StMotB C terminal

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Lynmarie K Thompson, Joel L. Sussman
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