Integrin 3D structures: Difference between revisions

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**[[2vdm]], [[2vdn]], [[3t3m]], [[3t3p]] – hIG headpiece + antibody + antagonist + Mg<br />
**[[2vdm]], [[2vdn]], [[3t3m]], [[3t3p]] – hIG headpiece + antibody + antagonist + Mg<br />
**[[2vdo]], [[2vdp]], [[2vdq]], [[2vdr]] – hIG headpiece + antibody + fibrinogen peptide + Mg<br />
**[[2vdo]], [[2vdp]], [[2vdq]], [[2vdr]] – hIG headpiece + antibody + fibrinogen peptide + Mg<br />
**[[6v4p]] – hIG + antibody – Cryo-EM<br />
**[[6v4p]], [[7la4]] – hIG + antibody – Cryo-EM<br />
**[[7l8p]], [[7tct]], [[7td8]], [[7tho]], [[7tmz]], [[7tpd]], [[7u60]], [[7u9f]], [[7u9v]], [[7ubr]], [[7ucy]], [[7udg]], [[7udh]], [[7ue0]], [[7ufh]], [[7uh8]], [[7uje]], [[7ujk]], [[7uk9]], [[7uko]], [[7ukp]], [[7ukt]] – hIG + antibody + drug<br />


*IG α-4
*IG α-4
Line 95: Line 96:


**[[1lfa]] - hIG I domain + Mn <br />
**[[1lfa]] - hIG I domain + Mn <br />
**[[1zon]], [[4ixd]] - hIG I domain <br />
**[[1zon]], [[4ixd]], [[7kc3]] - hIG I domain 153-334 <br />
**[[1mqa]] - hIG I domain (mutant) <br />
**[[1mqa]] - hIG I domain (mutant) <br />
**[[1zoo]], [[1zop]], [[3f74]] - hIG I domain + Mg <br />
**[[1zoo]], [[1zop]], [[3f74]] - hIG I domain + Mg <br />
Line 111: Line 112:
**[[1rd4]], [[2ica]], [[3bqm]], [[3bqn]], [[3e2m]] - hIG I domain + inhibitor<br />
**[[1rd4]], [[2ica]], [[3bqm]], [[3bqn]], [[3e2m]] - hIG I domain + inhibitor<br />
**[[2o7n]], [[3m6f]] - hIG I domain + antagonist<br />
**[[2o7n]], [[3m6f]] - hIG I domain + antagonist<br />
**[[1xdd]], [[1xdg]], [[1xuo]] - hIG I domain + inhibitor + Mg<br />
**[[1xdd]], [[1xdg]], [[1xuo]], [[7kc5]] - hIG I domain + inhibitor + Mg<br />
**[[7kc6]] - hIG I domain + drug + Mg<br />
**[[3f78]] - hIG I domain + anesthetic + Mg<br />
**[[3f78]] - hIG I domain + anesthetic + Mg<br />
**[[3eoa]], [[3eob]] - hIG I domain + antibody<br />
**[[3eoa]], [[3eob]] - hIG I domain + antibody<br />
**[[3hi6]] - hIG I domain (mutant) + antibody + Mn<br />
**[[3hi6]] - hIG I domain (mutant) + antibody + Mn<br />
*IG α-L + IG β-2
**[[5e6u]] – hIG headpiece (mutant) + Ni<br />


*IG α-M
*IG α-M
Line 126: Line 132:
**[[3q3g]], [[3qa3]] – hIG + antibody<br />
**[[3q3g]], [[3qa3]] – hIG + antibody<br />
**[[4m76]] – hIG + complement C3<br />
**[[4m76]] – hIG + complement C3<br />
**[[2lke]], [[2lkj – hIG cytoplasmic domain – NMR<br />
**[[2lke]], [[2lkj]] – hIG cytoplasmic domain – NMR<br />
**[[4xw2]] – hIG + simvastatin<br />
**[[4xw2]] – hIG + simvastatin<br />
**[[6rhv]], [[6rhw]] – hIG + cytolysin<br />
**[[6rhv]], [[6rhw]] – hIG + cytolysin<br />


*IG α-M + IG β-2


*IG α-L
**[[7usm]] – hIG ectodomain – Cryo EM<br />
 
**[[7usl]] – hIG ectodomain + adenylate cyclase toxin + antibody Cryo EM<br />
**[[4ixd]] – hIG I domain<br />
**[[7p2d]] – hIG ectodomain + nanobody <br />
**[[5e6s]], [[5e6r]] – hIG AI, headpiece,pocket domains + Mg<br />
**[[2m3e]] hIG transmembrane domain - NMR<br />
 
*IG α-L + IG β-2
 
**[[5e6u]] – hIG headpiece (mutant) + Ni<br />


*IG α-V + IG β-3
*IG α-V + IG β-3
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**[[6om2]] – hIG (mutant) + Protgf-b1 RGD peptide<br />
**[[6om2]] – hIG (mutant) + Protgf-b1 RGD peptide<br />
**[[6uja]] – hIG + Protgf-b1 RGD – Cryo EM<br />
**[[6uja]] – hIG + Protgf-b1 RGD – Cryo EM<br />
**[[7y1t]] – hIG + TGF-b1 – Cryo EM<br />


*IG α-X
*IG α-X

Latest revision as of 11:32, 31 May 2023

3D structures of integrin3D structures of integrin

Updated on 31-May-2023

    • 4irz - hIG + antibody
  • IG α-4 (CD49d) + IG β-7
    • 3v4p - hIG headpiece (mutant) + antibody + Mg
    • 3v4v - hIG headpiece (mutant) + antibody + inhibitor + Mg
  • IG α-5 (CD49e) + IG β-1 (CD29)
    • 7nxd – hIG + Mg – Cryo-EM
    • 7nwl – hIG + fibronectin + laminin – Cryo-EM
    • 4wjk - hIG headpiece (mutant) + Mg
    • 4wk0, 4wk2, 4wk4 - hIG headpiece (mutant) + peptide + Mg
    • 3vi3 - hIG headpiece + antibody + Mg
    • 3vi4 - hIG headpiece + antibody + peptide + Mg
  • IG α-5 (CD49e) + IG β-3 (CD61) ectodomain
  • IG α-5 + IG β-6
    • 4um8 – hIG headpiece (mutant) + Ni
    • 5ffg – hIG headpiece + Ca
    • 4um9 – hIG headpiece (mutant) + Mg + transforming growth factor β 3
    • 5neu, 5net, 5ner, 5nem – hIG headpiece + foot-and-mouth virus – Cryo EM
    • 5ffo – hIG headpiece + TGF-beta-1
  • IG α-6 + IG β-1
    • 7ceb, 7cec – hIG headpiece + laminin + Mg
  • IG α-L
    • 1lfa - hIG I domain + Mn
    • 1zon, 4ixd, 7kc3 - hIG I domain 153-334
    • 1mqa - hIG I domain (mutant)
    • 1zoo, 1zop, 3f74 - hIG I domain + Mg
    • 1mq9 - hIG I domain (mutant) + Mn
    • 1mjn - hIG I domain (mutant) + Mg
    • 2k8o – hIG cytoplasmic domain (mutant) – NMR
    • 5e6s, 5e6r – hIG AI, headpiece,pocket domains + Mg
    • 2m3e – hIG transmembrane domain - NMR
  • IG α-L complexes
    • 1cqp - hIG I domain + lovastatin + Mg
    • 1mq8, 3bn3, 3tcx - hIG I domain (mutant) + intracellular adhesion molecule + Mg
    • 1t0p - hIG I domain + intracellular adhesion molecule-3 + Mg
    • 1rd4, 2ica, 3bqm, 3bqn, 3e2m - hIG I domain + inhibitor
    • 2o7n, 3m6f - hIG I domain + antagonist
    • 1xdd, 1xdg, 1xuo, 7kc5 - hIG I domain + inhibitor + Mg
    • 7kc6 - hIG I domain + drug + Mg
    • 3f78 - hIG I domain + anesthetic + Mg
    • 3eoa, 3eob - hIG I domain + antibody
    • 3hi6 - hIG I domain (mutant) + antibody + Mn
  • IG α-L + IG β-2
    • 5e6u – hIG headpiece (mutant) + Ni
  • IG α-M
  • IG α-M + IG β-2
    • 7usm – hIG ectodomain – Cryo EM
    • 7usl – hIG ectodomain + adenylate cyclase toxin + antibody – Cryo EM
    • 7p2d – hIG ectodomain + nanobody
  • IG α-V + IG β-3
    • 6mk0 – hIG + antagonist
    • 6msl – hIG + cysteine knot protein
    • 6msu – hIG + EETI-II
    • 6naj – hIG + fibronectin
  • IG α-V + IG β-8
    • 6djp, 6ujb, 6ujc – hIG + antibody – Cryo EM
    • 6om1 – hIG (mutant)
    • 6om2 – hIG (mutant) + Protgf-b1 RGD peptide
    • 6uja – hIG + Protgf-b1 RGD – Cryo EM
    • 7y1t – hIG + TGF-b1 – Cryo EM
  • IG α-X
    • 2luv – hIG cytoplasmic domain – NMR
    • 1n3y – hIG domain I (mutant)
  • IG α-X + IG β-2 (CD18)
  • IG β-1D
    • 3g9w – hIG cytoplasmic tail + talin 2 F2-F3 domain
  • IG β-2 (CD18)
    • 2p26, 2p28, 5e6w – hIG phe2 + phe3 domains
    • 1yuk – hIG chain A PSI domain + chain B I-EGF domain
    • 5zaz – hIG transmembrane domain - NMR
  • IG β-3 (CD61)
    • 1s4x, 2kv9, 2ljd, 2lje, 2ljf – hIG cytoplasmic domain – NMR
    • 2rmz, 2rn0 – hIG transmembrane domain – NMR
    • 2l91 - hIG transmembrane domain (mutant) – NMR
    • 2l1c – hIG cytoplasmic tail + SHC
    • 2mtp – hIG cytoplasmic tail (mutant) + hIG α-2 β peptide+ filamin rod domain
    • 6bxb, 6bxf – hIG/hIG α-L
  • IG β-4 (CD104; Gp150)
    • 2f7q, 3f7r, 1qg3, 3f7q, 4wtw, 4wtx - hIG fibronectin type III domain
    • 2yrz – hIG fibronectin type III domain – NMR
    • 3f7p, 4q58 - hIG fibronectin type III domain + plectin-1
    • 6gvl - hIG fibronectin type III domain + dystonin
    • 6gvk - hIG fibronectin type III domain (mutant) + dystonin
    • 3fq4, 3fso, 3h6a – hIG Calx-β domain
    • 6hyf - rIG fibronectin type III domain
  • IG β-7
    • 2brq, 2jf1 – hIG cytoplasmic tail + filamin rod domain

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Michal Harel