Dehalogenase 3D structures

3D structures of dehalogenase3D structures of dehalogenase

Updated on 19-December-2022

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• Haloalkane dehalogenase
  • 6a41 – RbHLD – Rhodobacteraceae
    
  • 4c6h – RbHLD + hexanol
    
  • 3u1t – HLD DmmA – marine
    
  • 2had, 1ede, 2pky, 2yxp, 1edb – XaHLD – Xanthobacter autotrophicus
    
  • 1be0, 1bee, 1hde, 1bez – XaHLD (mutant)
    
  • 3wi7 – AtHLD DatA – Agrobacterium tumefaciens
    
  • 3wib – AtHLD DatA (mutant)
    
  • 2xt0 – HLD DppA – Plesiocystis pacifica
    
  • 7pw1 – HLD – synthetic
    
• Haloalkane dehalogenase from Rhodococcus rhodochrous DhaA
  • 1bn6, 1bn7, 4kaf, 4kaa, 4kac – RrHLD – Rhodococcus rhodochrous
    
  • 2v9z, 5flk, 5y2x, 6sp5, 6xtc, 7o3o, 7o8b – RrHLD (mutant)
    
  • 4e46 – RrHLD + propanol
    
  • 6zcc, 7ond, 7oo4 – RrHLD + flurophore
    
  • 4fwb – RrHLD DhaA (mutant) + trichloropropane
    
  • 7pcw, 7pcx – RrHLD DhaA (mutant) + chloroalkane derivative
    
  • 7wam, 7wan – RrHLD DhaA (mutant) + quinoline derivative
    
• Haloalkane dehalogenase from Sphingomonas paucimobolis LinB
  • 1cv2 – SpHLD LinB
    
  • 5lka – SpHLD LinB (mutant)
    
  • 1k5p, 1mj5, 4h77, 1iz7, 2bfn, 1g4h – SpHLD LinB + Cl
    
  • 4h7d, 4h7e, 4h7f, 4h7h, 4h7i, 4h7j, 4h7k, 4wdq, 4wdr – SpHLD LinB (mutant) + Cl
    
  • 1k6e – SpHLD LinB + Cl + Br
    
  • 1k63 – SpHLD LinB + Br-propanol
    
  • [1d07]], 1iz8 – SpHLD LinB + Br
    
  • 1g42 – SpHLD LinB + trichloropropane
    
  • 1g5f – SpHLD LinB + trichloroethane
    
  • 7nfz – HLD LinB (mutant) – Sphingomonas japonicum
    
• Haloalkane dehalogenase complex with halogen
  • 2dhc – XaHLD + dichloroethane
    
  • 2dhd – XaHLD + chloroethoxy oxobutanoic acid
    
  • 2dhe, 1edd – XaHLD + Cl
    
  • 2eda, 2edc – XaHLD + I
    
  • 4mj3 – HLD DmrA + Cl – Mycobacterium rhodesiae
    
  • 2qvb – MtHLD 3 + Cl – Mycobacterium tuberculosis
    
  • 2o2h – MtHLD 3 + dichloroethane
    
  • [2o2i]] – MtHLD 3 + Br
    
  • 1b6g – XaHLD + Cl
    
  • 1cij – XaHLD + Br
    
  • 4hzg, 5uy1 – RrHLD + Cl
    
  • 3rk4, 3fbw, 3fwh, 3g9x, 3sk0, 4f5z, 4wcv, 6xt8 – RrHLD (mutant) + Cl
    
  • 1cqw – RrHLD + I
    
  • 5uxz, 5y2y, 5vnp, 6y7b – RrHLD + Cl + fluorogenic ligand
    
  • 4f60 – RrHLD (mutant) + F
    
  • 4brz – RbHLD + Cl
    
  • 4k2a, 6xy9 – BeHLD DbeA + Cl – Bradyrhizobium elkanii
    
  • 6s42 – BeHLD (mutant) + Cl + I
    
  • 3a2m, 3a2n, 3afi – BjHLD DbjA + Cl – Bradyrhizobium japonicum
    
  • 6s06 – HLD (mutant) + Cl – Sphingobium japonicum
    
  • 3a2l – BjHLD DbjA (mutant) + Cl
    
  • 5esr – HLD DccA + Cl – Caulobacter crescentus
    
  • 6f9o – HLD + Cl – Psychrobacter cryohalolentis
    
  • 7avr – HLD DpaA + Cl – Paraglaciecola agarilytica
    
• Fluoroacetate dehalogenase (FDH)
  • 1y37 – BuFDH – Burkholderia
    
  • 3r3u, 5nyv, 5k3d, 5k3c, 6gxh, 6gxl, 6muh, 6muy, 6mzz, 6n00, 6fsx, 5o2i, 5o2g – RpFDH – Rhodopseudomonas palustris
    
  • 3r40, 3r41, 5t4t, 5k3f, 5k3e – RpFDH (mutant)
    
• Fluoroacetate dehalogenase complexes
  • 6gxd, 6gxf, 6gxt, 6qhp, 6qhq, 6qhs, 6qht, 6qhu, 6qhv, 6qhw, 6qhx, 6qhy, 6qhz, 6qi0, 6qi1, 6qi2, 6qi3, 6qkw – RpFDH + fluoroacetate
    
  • 3r3v, 3r3y, 5swn, 5k3a – RpFDH (mutant) + fluoroacetate
    
  • 5k3c – RpFDH + fluorotryptophan
    
  • 3r3w, 5k3b, 6qku – RpFDH (mutant) + chloroacetate
    
  • 3r3x – RpFDH (mutant) + bromoacetate
    
  • 3r3z – RpFDH + glycolate
    
  • 6qkt – RpFDH (mutant) + glycolate
    
  • 6qks – RpFDH + Cl
    
  • 3b12 – BuFDH (mutant) + fluoroacetate
    
• Halohydrin dehalogenase (HHDH)
  • 1zmo – HHDH – Anthrobacter
    
  • 3zn2 – AtHHDH
    
  • 7wkq – HHDH – Acidimicrobila bacterium
    
• Halohydrin dehalogenase complexes
  • 1pwx – AtHHDH + Br
    
  • 1px0 – AtHHDH + haloalcohol mimic
    
  • 1zo8 – AtHHDH + p-nitrostyrene oxide
    
  • 1pwz, 1zmt – AtHHDH + styrene oxide + Cl
    
  • 4ixt – AtHHDH (mutant) + ethyl cyano-hydroxybutyrate
    
  • 4ixw – RrHHDH (mutant) + ethyl oxiranyl acetate – Rhizobium radiobacter
    
  • 4iy1 – RrHHDH + Cl
    
  • 5kwe – RrHHDH (mutant) + Cl
    
  • 5kvc – RrHHDH (mutant) + imidazole + Cl
    
• L-2-haloacid dehalogenase (LHDH) or (S)-2-haloacid dehalogenase
  • 1jud – PsLHDH – Pseudomonas
    
  • 2w43 – StLHDH – Sulfolobus tokodaii
    
  • 2yml, 2ymm, 2ymp, 2ymq – RhLHDH
    
  • 4ce6, 4cf3, 4cf4, 4cf5, 4cnq – RhLHDH (mutant)
    
  • 3bjx – PpLHDH – Pseudomonas putida
    
  • 3umc – LHDH – Pseudomonas aeruginosa
    
  • 3um9 – LHDH – Polaromonas
    
  • 3umg – LHDH – Rhodococcus jostii
    
  • 2no4 – BcLHDH IVA – Burkholderia cepacia
    
  • 7arp – ZgLHDH – Zobellia galactanivorans
    
  • 7asz – ZgLHDH (mutant)
    
• L-2-haloacid dehalogenase complexes
  • 1aq6, 1qq5 – XaLHDH + formic acid
    
  • 1zrm – PsLHDH (mutant) + butanoic acid
    
  • 1zrn – PsLHDH (mutant) + acetic acid
    
  • 1qh9 – PsLHDH + lactic acid
    
  • 2w11 – StLHDH + lactic acid
    
  • 1qq6, 1qq7 – XaLHDH + aspartate carboxymethyl ester + Cl
    
  • 2yn4 – RhLHDH + chlorobutyrate
    
  • 2no5 – BcLHDH IVA + 2-monochloroprapanate
    
• R-2-haloacid dehalogenase (RHDH)
  • 5h00, 5gzy – PpRHDH
    
  • 5h01 – PpRHDH (mutant)
    
  • 5gzx – PpRHDH (mutant) + chloropropionate
    
• DL-2-haloacid dehalogenase (DLHDH)
  • 4n2x – MeDLHDH – Methylobacterium
    
  • 3wj8 – MeDLHDH + bromo-methylpropionate
    
• Iodotyrosine dehalogenase (ITDH)
  • 3gb5 – mITDH – mouse
    
  • 3to0 – mITDH (mutant)
    
  • 3gfd – mITDH + iodotyrosine
    
  • 3tnz – mITDH (mutant) + iodotyrosine
    
  • 3gh8 – mITDH + diiodotyrosine
    
  • 4ttb – hITDH 1 + FMN
    
  • 4ttc – hITDH 1 + FMN + iodotyrosine
    
  • 5yak – hITDH 1 (mutant) + FMN + fluorotyrosine
    
• cis-3-chloroacrylic acid dehalogenase (CaaD)
  • 2flz, 3mf8 – CbCaaD – Coryneform bacterium
    
  • 3mf7 – CbCaaD + oxirane-carboxylate
    
  • 2flt – CbCaaD + lactic acid
    
• trans-3-chloroacrylic acid dehalogenase (TaaD)
  • 3ej3 – PpTaaD α+β subunits – Pseudomonas pavonacea
    
  • 3ej7, 3ej9 – PpTaaD α (mutant) +β subunits
    
  • 1s0y – PpTaaD α+β subunits + malonic acid
    
• 5-chloromuconolactone dehalogenase (ClcF)
  • 3znu, 3znj, 4fpi – RoClcF – Rhodococcus opacus
    
  • 3zo7 – RoClcF + 5-chloromuconolactone
    
• 4-chlorobenzoyl CoA dehalogenase (CBCD)
  • 1nzy – PsCBCD
    
  • 1jxz – PsCBCD + hydroxybenzoyl CoA
    
• Tetrachloroethene reductive dehalogenase (TCRD)
  • 4uqu, 4ur3 – SmTCRD catalytic subunit – Sulfurospirillum multivorans
    
  • 4ur0 – SmTCRD catalytic subunit + trichloroethene
    
  • 4ur1 – SmTCRD catalytic subunit + tribromoethene
    
  • 5m2g, 5m8u, 5m91, 5m92, 5maa – SmTCRD catalytic subunit + bromophenol derivative
    
  • 5m8w, 5m8x, 5m8y, 5ma0, 5ma1 – SmTCRD catalytic subunit + chlorophenol derivative
    
  • 5m8z, 5m90 – SmTCRD catalytic subunit + fluoroophenol derivative
    
  • 5ma2 – SmTCRD catalytic subunit + iodophenol
    
  • 5obi, 5obp – SmTCRD catalytic subunit + cofactor
    
  • 4ur2 – SmTCRD catalytic subunit + iodide