FunctionRetinoid X receptor (RXR) is a nuclear receptor activated by 9-cis retinoic acid. RXR makes a heterodimer with subfamily 1 nuclear receptors including retinoic acid receptor (RAR). In the absence of ligand, the RAR/RXR complex binds the hormone response elements complexed with corepressor protein. Upon binding of the ligand, the corepressor disassociates from the receptor and associates with the coactivator leading to transcription activation. RXR contains a DNA-binding domain (DBD) and ligand-binding domain (LBD)[1]. For additional details on RXR-α see RA Mediated T-reg Differentiation.
There are 3 classes of RXR: α, β and γ.
- RXRα plays a pivotal role in liver metabolism[2].
- RXRγ mediates the anti proliferative effects of retinoid acid.
RelevanceRXRγ is involved in working memory and despair behavior[3]. RXR pathway is a positive regulator of myelin debris clearance and has a role in age-related decline in remyelination[4].
Structural highlights. Hydrophobic, Polar. Water molecules are shown as red spheres. . The ligand-binding residues are conserved in the 3 classes of RXR
[5].
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3D structures of retinoid X receptor3D structures of retinoid X receptor
Updated on 25-August-2019
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- Retinoid X receptor α
- 3nsp, 6hn6, 1g1u - hRXR LBD – human
- 1rxr – hRXR DBD (mutant) – NMR
- 2q60 – RXR LBD – Polyandrocarpa misakiensis
- Retinoid X receptor α binary complex
- 4cn2, 4cn3, 4cn5, 4cn7, 1by4 - hRXR DBD + DNA
- 1g5y, 4zhs - hRXR LBD + retinoid
- 1dkf – mRXR LBD + mRAR LBD – mouse
- 1fby - hRXR LBD + 9-cis retinoic acid
- 3nsq - hRXR LBD + antagonist
- 5gym - hRXR LBD + ligand
- 3fug, 5m4k - hRXR LBD + NCOA2 peptide
- 3fc6 – hRXR LBD + NR1H3 protein
- 3r29 - hRXR LBD + corepressor peptide SMRT2
- 4n5g, 4n8r - hRXR LBD + modulator
- 4ozr, 4ozt - hRXR LBD + ecdysone receptor
- 4j5w - hRXR LBD + orphan nuclear receptor PXR
- Retinoid X receptor α ternary complex
- 1dsz - hRXR LBD + hRAR LBD + DNA
- 3a9e - hRXR LBD + hRAR LBD + NCOA2 peptide
- 3r2a - hRXR LBD + corepressor peptide SMRT2 + antagonist
- 3h0a, 1fm6, 1fm9, 1k74, 5ji0 - hRXR LBD + PPAR-γ + 9-cis retinoic acid + NCOA2 peptide
- 1rdt - hRXR LBD + PPAR-γ + NCOA2 peptide
- 3oap, 4zhs - hRXR LBD + 9-cis retinoic acid + NCOA2 peptide
- 5mmw, 5mku, 5mkj, 5mj5 - hRXR LBD + honokiol derivative + peptide
- 3ozj - hRXR LBD + bigelovin + NCOA2 peptide
- 3pcu - hRXR LBD + rutamarin + NCOA2 peptide
- 2zxz, 2zy0, 3r5m, 1mzn, 1mv9, 1mvc, 4k4j, 4k6i, 4m8e, 4m8h, 5lyq - hRXR LBD + agonist + NCOA2 peptide
- 2acl - hRXR LBD + agonist + oxysterols receptor α
- 3kwy - hRXR LBD + triphenyltin + NCOA2 peptide
- 3e94 - hRXR LBD + tributylin + NCOA2 peptide
- 2p1t, 2p1u, 2p1v, 4rfw, 4rmc, 4rme, 4rmd - hRXR LBD + retinoid + NCOA2 peptide
- 5ec9 - hRXR LBD + coactivator TIF2 peptide + activator
- 4oc7 - hRXR LBD + acrylic acid derivative + NCOA2 peptide
- 5ec9 - hRXR LBD + benzofuran derivative + NCOA2 peptide
- 4poh, 4poj, 4pp3, 4pp5 - hRXR LBD + trienoic acid derivative + NCOA2 peptide
- 1xls - hRXR LBD (mutant) + orphan nuclear receptor NR1I3 + NCOA2 peptide
- 4j5x - hRXR LBD + orphan nuclear receptor PXR + phosphonic acid derivative
- 1r0n, 1ynw - hRXR DBD + DR3 response element + vitamin D3 receptor
- Retinoid X receptor α quaternary complex
- 3dzu, 3dzy, 3e00 - hRXR LBD + PPAR-γ + 9-cis retinoic acid + NCOA2 peptide + DNA
- 5uan - hRXR LBD + RAR + 9-cis retinoic acid + NCOA2 peptide + DNA
- 5z12 - hRXR LBD + 9-cis retinoic acid + NCOA2 peptide + bile acid receptor
- 4zo1 - hRXR + NCOA2 peptide + thyroid hormone receptor β
- 3uvv - hRXR LBD + 9-cis retinoic acid + thyronine + thyroid hormone receptor α
- 4zo1 - hRXR LBD + NCOA2 peptide + thyroid hormone + thyroid hormone receptor β
- 3fal - hRXR LBD + modulator + oxysterols receptor α + 9-cis retinoic acid
- 1xv9 - hRXR LBD + orphan nuclear receptor NR1I3 + pregnane + NCOA2 peptide
- 1xvp - hRXR LBD + orphan nuclear receptor NR1I3 + CITCO + NCOA2 peptide
- 4nqa - hRXR DBD + DR4 response element + liver X nuclear receptor + NCOA2 peptide
- Retinoid X receptor β
- 1xdk - mRXR LBD + mRAR LBD + thyroid receptor associated protein
- 1uhl - hRXR LBD + oxysterols receptor α + NCOA2 peptide
- 1h9u – hRXR LBD + agonist
- 5hjp, 5i4v - hRXR LBD + oxysterols receptor LXR-β + agonist
- 5kyj, 5kya - hRXR LBD (mutant) + oxysterols receptor LXR-β + modulator
- Retinoid X receptor γ
ReferencesReferences
- ↑ Dawson MI, Xia Z. The retinoid X receptors and their ligands. Biochim Biophys Acta. 2012 Jan;1821(1):21-56. doi: 10.1016/j.bbalip.2011.09.014. , Epub 2011 Oct 1. PMID:22020178 doi:http://dx.doi.org/10.1016/j.bbalip.2011.09.014
- ↑ Wu Y, Zhang X, Bardag-Gorce F, Robel RC, Aguilo J, Chen L, Zeng Y, Hwang K, French SW, Lu SC, Wan YJ. Retinoid X receptor alpha regulates glutathione homeostasis and xenobiotic detoxification processes in mouse liver. Mol Pharmacol. 2004 Mar;65(3):550-7. PMID:14978233 doi:http://dx.doi.org/10.1124/mol.65.3.550
- ↑ Wietrzych-Schindler M, Szyszka-Niagolov M, Ohta K, Endo Y, Perez E, de Lera AR, Chambon P, Krezel W. Retinoid x receptor gamma is implicated in docosahexaenoic acid modulation of despair behaviors and working memory in mice. Biol Psychiatry. 2011 Apr 15;69(8):788-94. doi: 10.1016/j.biopsych.2010.12.017., Epub 2011 Feb 21. PMID:21334601 doi:http://dx.doi.org/10.1016/j.biopsych.2010.12.017
- ↑ Natrajan MS, de la Fuente AG, Crawford AH, Linehan E, Nunez V, Johnson KR, Wu T, Fitzgerald DC, Ricote M, Bielekova B, Franklin RJ. Retinoid X receptor activation reverses age-related deficiencies in myelin debris phagocytosis and remyelination. Brain. 2015 Dec;138(Pt 12):3581-97. doi: 10.1093/brain/awv289. Epub 2015 Oct 12. PMID:26463675 doi:http://dx.doi.org/10.1093/brain/awv289
- ↑ Egea PF, Mitschler A, Rochel N, Ruff M, Chambon P, Moras D. Crystal structure of the human RXRalpha ligand-binding domain bound to its natural ligand: 9-cis retinoic acid. EMBO J. 2000 Jun 1;19(11):2592-601. PMID:10835357 doi:10.1093/emboj/19.11.2592
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