User:Michael Strong/H1N1/NS
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NS1 Protein Structural Homolgy ModelNS1 Protein Structural Homolgy Model
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NS1 PolymorphismsNS1 Polymorphisms
| Protein | Polymorphism | Strain with Polymorphism | Number of Strains with Polymorphism | |
| NS1 | D12E | 229536107_A/Nebraska/02/200 | 1 | |
| NS1 | F32L | 229535811_A/Texas/09/2009 | 1 | |
| NS1 | G45R | 229598886_A/Texas/15/2009 | 1 | |
| NS1 | R88C | 229536033_A/Minnesota/02/20 | 1 | |
| NS1 | E97G | 229892754_A/Canada-NS/RV153 | 1 | |
| NS1 | M104T | 237624336_A/swine/Alberta/O | 1 | |
| NS1 | I123V | 229892764_A/Canada-AB/RV153 | 15 | |
| NS1 | F134I | 237624336_A/swine/Alberta/O | 1 |
NS1 Multiple Sequence AlignmentNS1 Multiple Sequence Alignment
H1N1 Swine Flu Multiple Sequence Alignment of NS1 Protein, 53 sequences
gi|229598886_A/Texas/15/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKRRGNTL 50
gi|229892754_A/Canada-NS/RV153 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536033_A/Minnesota/02/20 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536107_A/Nebraska/02/200 MDSNTMSSFQVECFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229535811_A/Texas/09/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPLLDRLRRDQKSLKGRGNTL 50
gi|229396500_A/Ohio/07/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396477_A/New_York/19/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396402_A/New_York/31/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396413_A/New_York/23/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396387_A/New_York/18/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396449_A/New_York/15/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396351_A/New_York/12/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396373_A/New_York/11/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396433_A/New_York/10/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396363_A/New_York/06/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229484061_A/Canada-ON/RV152 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229535829_A/California/14/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892761_A/Canada-ON/RV152 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892770_A/Canada-ON/RV152 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892764_A/Canada-AB/RV153 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511869_A/Mexico/4108/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511872_A/Mexico/4115/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511860_A/Mexico/4486/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511866_A/Mexico/4603/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511857_A/Mexico/4604/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892767_A/Canada-NS/RV153 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892758_A/Mexico/InDRE411 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229783375_A/Korea/01/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229783386_A/New_York/1669/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229783407_A/New_York/1682/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536016_A/Arizona/01/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536115_A/Michigan/02/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229535991_A/South_Carolina/ MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462691_A/Castilla-La MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462727_A/Castilla-La MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462715_A/Pais_Vasco/GP20 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462703_A/Valencia/GP4/20 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229484054_A/Canada-NS/RV153 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229484058_A/Mexico/InDRE448 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229368684_A/Denmark/513/200 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396460_A/Texas/06/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536007_A/Kansas/03/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977123_A/California/08/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977155_A/California/08/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227809839_A/California/04/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977111_A/California/04/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|228017753_A/California/06/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977143_A/California/07/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977167_A/California/07/2 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229299532_A/Texas/04/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227831789_A/Texas/05/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229299512_A/Texas/05/2009 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237624336_A/swine/Alberta/O MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
***********:*******************:************ *****
gi|229598886_A/Texas/15/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892754_A/Canada-NS/RV153 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEGMSR 100
gi|229536033_A/Minnesota/02/20 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSCYLSDMTLEEMSR 100
gi|229536107_A/Nebraska/02/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229535811_A/Texas/09/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396500_A/Ohio/07/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396477_A/New_York/19/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396402_A/New_York/31/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396413_A/New_York/23/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396387_A/New_York/18/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396449_A/New_York/15/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396351_A/New_York/12/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396373_A/New_York/11/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396433_A/New_York/10/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396363_A/New_York/06/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229484061_A/Canada-ON/RV152 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229535829_A/California/14/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892761_A/Canada-ON/RV152 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892770_A/Canada-ON/RV152 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892764_A/Canada-AB/RV153 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511869_A/Mexico/4108/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511872_A/Mexico/4115/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511860_A/Mexico/4486/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511866_A/Mexico/4603/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511857_A/Mexico/4604/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892767_A/Canada-NS/RV153 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892758_A/Mexico/InDRE411 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229783375_A/Korea/01/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229783386_A/New_York/1669/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229783407_A/New_York/1682/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229536016_A/Arizona/01/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229536115_A/Michigan/02/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229535991_A/South_Carolina/ GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462691_A/Castilla-La GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462727_A/Castilla-La GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462715_A/Pais_Vasco/GP20 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462703_A/Valencia/GP4/20 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229484054_A/Canada-NS/RV153 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229484058_A/Mexico/InDRE448 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229368684_A/Denmark/513/200 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396460_A/Texas/06/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229536007_A/Kansas/03/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977123_A/California/08/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977155_A/California/08/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227809839_A/California/04/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977111_A/California/04/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|228017753_A/California/06/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977143_A/California/07/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977167_A/California/07/2 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229299532_A/Texas/04/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227831789_A/Texas/05/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229299512_A/Texas/05/2009 GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237624336_A/swine/Alberta/O GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
************************************* ******** ***
gi|229598886_A/Texas/15/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892754_A/Canada-NS/RV153 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536033_A/Minnesota/02/20 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536107_A/Nebraska/02/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229535811_A/Texas/09/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396500_A/Ohio/07/2009 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396477_A/New_York/19/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396402_A/New_York/31/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396413_A/New_York/23/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396387_A/New_York/18/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396449_A/New_York/15/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396351_A/New_York/12/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396373_A/New_York/11/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396433_A/New_York/10/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396363_A/New_York/06/200 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229484061_A/Canada-ON/RV152 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229535829_A/California/14/2 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892761_A/Canada-ON/RV152 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892770_A/Canada-ON/RV152 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892764_A/Canada-AB/RV153 DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511869_A/Mexico/4108/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511872_A/Mexico/4115/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511860_A/Mexico/4486/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511866_A/Mexico/4603/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511857_A/Mexico/4604/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892767_A/Canada-NS/RV153 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892758_A/Mexico/InDRE411 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229783375_A/Korea/01/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229783386_A/New_York/1669/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229783407_A/New_York/1682/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536016_A/Arizona/01/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536115_A/Michigan/02/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229535991_A/South_Carolina/ DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462691_A/Castilla-La DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462727_A/Castilla-La DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462715_A/Pais_Vasco/GP20 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462703_A/Valencia/GP4/20 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229484054_A/Canada-NS/RV153 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229484058_A/Mexico/InDRE448 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229368684_A/Denmark/513/200 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396460_A/Texas/06/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536007_A/Kansas/03/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977123_A/California/08/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977155_A/California/08/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227809839_A/California/04/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977111_A/California/04/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|228017753_A/California/06/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977143_A/California/07/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977167_A/California/07/2 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229299532_A/Texas/04/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227831789_A/Texas/05/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229299512_A/Texas/05/2009 DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237624336_A/swine/Alberta/O DWFTLMPRQKIIGPLCVRLDQAIMEKNIVLKANISVIFNRLETLILLRAF 150
*** ******************:**********:****************
gi|229598886_A/Texas/15/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892754_A/Canada-NS/RV153 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536033_A/Minnesota/02/20 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536107_A/Nebraska/02/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229535811_A/Texas/09/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396500_A/Ohio/07/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396477_A/New_York/19/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396402_A/New_York/31/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396413_A/New_York/23/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396387_A/New_York/18/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396449_A/New_York/15/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396351_A/New_York/12/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396373_A/New_York/11/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396433_A/New_York/10/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396363_A/New_York/06/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229484061_A/Canada-ON/RV152 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229535829_A/California/14/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892761_A/Canada-ON/RV152 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892770_A/Canada-ON/RV152 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892764_A/Canada-AB/RV153 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511869_A/Mexico/4108/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511872_A/Mexico/4115/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511860_A/Mexico/4486/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511866_A/Mexico/4603/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511857_A/Mexico/4604/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892767_A/Canada-NS/RV153 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892758_A/Mexico/InDRE411 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229783375_A/Korea/01/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229783386_A/New_York/1669/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229783407_A/New_York/1682/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536016_A/Arizona/01/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536115_A/Michigan/02/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229535991_A/South_Carolina/ TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462691_A/Castilla-La TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462727_A/Castilla-La TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462715_A/Pais_Vasco/GP20 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462703_A/Valencia/GP4/20 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229484054_A/Canada-NS/RV153 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229484058_A/Mexico/InDRE448 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229368684_A/Denmark/513/200 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396460_A/Texas/06/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536007_A/Kansas/03/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977123_A/California/08/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977155_A/California/08/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227809839_A/California/04/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977111_A/California/04/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|228017753_A/California/06/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977143_A/California/07/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977167_A/California/07/2 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229299532_A/Texas/04/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227831789_A/Texas/05/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229299512_A/Texas/05/2009 TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237624336_A/swine/Alberta/O TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
**************************************************
gi|229598886_A/Texas/15/2009 FAWRNCDENGRPSLPPEQK 219
gi|229892754_A/Canada-NS/RV153 FAWRNCDENGRPSLPPEQK 219
gi|229536033_A/Minnesota/02/20 FAWRNCDENGRPSLPPEQK 219
gi|229536107_A/Nebraska/02/200 FAWRNCDENGRPSLPPEQK 219
gi|229535811_A/Texas/09/2009 FAWRNCDENGRPSLPPEQK 219
gi|229396500_A/Ohio/07/2009 FAWRNCDENGRPSLPPEQK 219
gi|229396477_A/New_York/19/200 FAWRNCDENGRPSLPPEQK 219
gi|229396402_A/New_York/31/200 FAWRNCDENGRPSLPPEQK 219
gi|229396413_A/New_York/23/200 FAWRNCDENGRPSLPPEQK 219
gi|229396387_A/New_York/18/200 FAWRNCDENGRPSLPPEQK 219
gi|229396449_A/New_York/15/200 FAWRNCDENGRPSLPPEQK 219
gi|229396351_A/New_York/12/200 FAWRNCDENGRPSLPPEQK 219
gi|229396373_A/New_York/11/200 FAWRNCDENGRPSLPPEQK 219
gi|229396433_A/New_York/10/200 FAWRNCDENGRPSLPPEQK 219
gi|229396363_A/New_York/06/200 FAWRNCDENGRPSLPPEQK 219
gi|229484061_A/Canada-ON/RV152 FAWRNCDENGRPSLPPEQK 219
gi|229535829_A/California/14/2 FAWRNCDENGRPSLPPEQK 219
gi|229892761_A/Canada-ON/RV152 FAWRNCDENGRPSLPPEQK 219
gi|229892770_A/Canada-ON/RV152 FAWRNCDENGRPSLPPEQK 219
gi|229892764_A/Canada-AB/RV153 FAWRNCDENGRPSLPPEQK 219
gi|237511869_A/Mexico/4108/200 FAWRNCDENGRPSLPPEQK 219
gi|237511872_A/Mexico/4115/200 FAWRNCDENGRPSLPPEQK 219
gi|237511860_A/Mexico/4486/200 FAWRNCDENGRPSLPPEQK 219
gi|237511866_A/Mexico/4603/200 FAWRNCDENGRPSLPPEQK 219
gi|237511857_A/Mexico/4604/200 FAWRNCDENGRPSLPPEQK 219
gi|229892767_A/Canada-NS/RV153 FAWRNCDENGRPSLPPEQK 219
gi|229892758_A/Mexico/InDRE411 FAWRNCDENGRPSLPPEQK 219
gi|229783375_A/Korea/01/2009 FAWRNCDENGRPSLPPEQK 219
gi|229783386_A/New_York/1669/2 FAWRNCDENGRPSLPPEQK 219
gi|229783407_A/New_York/1682/2 FAWRNCDENGRPSLPPEQK 219
gi|229536016_A/Arizona/01/2009 FAWRNCDENGRPSLPPEQK 219
gi|229536115_A/Michigan/02/200 FAWRNCDENGRPSLPPEQK 219
gi|229535991_A/South_Carolina/ FAWRNCDENGRPSLPPEQK 219
gi|229462691_A/Castilla-La FAWRNCDENGRPSLPPEQK 219
gi|229462727_A/Castilla-La FAWRNCDENGRPSLPPEQK 219
gi|229462715_A/Pais_Vasco/GP20 FAWRNCDENGRPSLPPEQK 219
gi|229462703_A/Valencia/GP4/20 FAWRNCDENGRPSLPPEQK 219
gi|229484054_A/Canada-NS/RV153 FAWRNCDENGRPSLPPEQK 219
gi|229484058_A/Mexico/InDRE448 FAWRNCDENGRPSLPPEQK 219
gi|229368684_A/Denmark/513/200 FAWRNCDENGRPSLPPEQK 219
gi|229396460_A/Texas/06/2009 FAWRNCDENGRPSLPPEQK 219
gi|229536007_A/Kansas/03/2009 FAWRNCDENGRPSLPPEQK 219
gi|227977123_A/California/08/2 FAWRNCDENGRPSLPPEQK 219
gi|227977155_A/California/08/2 FAWRNCDENGRPSLPPEQK 219
gi|227809839_A/California/04/2 FAWRNCDENGRPSLPPEQK 219
gi|227977111_A/California/04/2 FAWRNCDENGRPSLPPEQK 219
gi|228017753_A/California/06/2 FAWRNCDENGRPSLPPEQK 219
gi|227977143_A/California/07/2 FAWRNCDENGRPSLPPEQK 219
gi|227977167_A/California/07/2 FAWRNCDENGRPSLPPEQK 219
gi|229299532_A/Texas/04/2009 FAWRNCDENGRPSLPPEQK 219
gi|227831789_A/Texas/05/2009 FAWRNCDENGRPSLPPEQK 219
gi|229299512_A/Texas/05/2009 FAWRNCDENGRPSLPPEQK 219
gi|237624336_A/swine/Alberta/O FAWRNCDENGRPSLPPEQK 219
*******************
NS1 BLASTNS1 BLAST
>gb|AAL87905.1|AF455711_1 nonstructural protein 1 [Influenza A virus (A/Swine/Iowa/930/01(H1N2))]
Length=219
Score = 432 bits (1111), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 217/219 (99%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMT+EEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTIEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRNC+E+GRPSLPP+QK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNCNEDGRPSLPPKQK 219
>gb|AAD51273.1|AF153261_1 NS1 [Influenza A virus (A/Swine/Texas/4199-2/98(H3N2))]
gb|AAD51275.1|AF153262_1 NS1 [influenza A virus (A/Swine/Minnesota/9088-2/98 (H3N2))]
Length=219
Score = 430 bits (1105), Expect = 6e-119, Method: Compositional matrix adjust.
Identities = 208/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAF75999.1|AF250128_2 NS1 [influenza A virus (A/Swine/Indiana/9K035/99 (H1N2))]
Length=219
Score = 429 bits (1102), Expect = 1e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVG+
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGI 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +ENGRPSL PEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNENGRPSLSPEQK 219
>gb|AAL29798.1| nonstructural protein [Influenza A virus (A/SW/IN/14810-T/01(H1N2))]
gb|AAL29799.1| nonstructural protein [Influenza A virus (A/SW/IN/14810-S/01(H1N2))]
Length=219
Score = 429 bits (1102), Expect = 1e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTL+EMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLKEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABI54396.1| nonstructural protein [Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1))]
gb|ABI54397.1| nonstructural protein [Influenza A virus (A/swine/Korea/CN22/2006(H3N1))]
Length=219
Score = 428 bits (1101), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAF+EEGAIVGEISPLPSLPGHT EDVKNA+GV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFSEEGAIVGEISPLPSLPGHTNEDVKNAIGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
L+GGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LVGGLEWNGNTVRGSENLQRFAWRNHNEDGRPSLPPEQK 219
>gb|ABA27444.1| nonstructural protein [Influenza A virus (A/swine/IN/PU542/04
(H3N1))]
Length=219
Score = 428 bits (1100), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNT+GLDIETATL+
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTIGLDIETATLI 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSV+FNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVVFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAK71694.1| nonstructural protein 1 [Influenza A virus (A/Turkey/MO/24093/99(H1N2))]
Length=219
Score = 428 bits (1100), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAD51277.1|AF153263_1 NS1 [influenza A virus (A/Swine/Iowa/8548-1/98)]
Length=219
Score = 428 bits (1100), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACH69556.1| nonstructural protein 1 [Influenza A virus (A/swine/OH/511445/2007(H1N1))]
Length=219
Score = 428 bits (1100), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWIL+EESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGP CV++D
Sbjct 61 GKQIVEWILREESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPFCVQMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +ENGRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNENGRPSLPPEQK 219
>gb|AAL87903.1|AF455710_1 nonstructural protein 1 [Influenza A virus (A/Swine/Minnesota/55551/00
(H1N2))]
Length=219
Score = 428 bits (1100), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LC+R+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCMRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGE+SPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEVSPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACD88664.1| nonstructural protein 1 [Influenza A virus (A/turkey/OH/313053/2004(H3N2))]
Length=219
Score = 428 bits (1100), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAD51271.1|AF153260_1 NS1 [influenza A virus (A/Swine/North Carolina/35922/98 (H3N2))]
Length=219
Score = 428 bits (1100), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKN++LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNA+GV
Sbjct 121 QAIMEKNLILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAL87901.1|AF455709_1 nonstructural protein 1 [Influenza A virus (A/Swine/North Carolina/93523/01
(H1N2))]
Length=219
Score = 428 bits (1100), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTEEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRV EN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVPENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAL87897.1|AF455707_1 nonstructural protein 1 [Influenza A virus (A/Swine/Ohio/891/01(H1N2))]
Length=219
Score = 427 bits (1099), Expect = 2e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDW MLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWLMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAG01763.1|AF251408_1 nonstructural protein 1 [Influenza A virus (A/Swine/Nebraska/209/98
(H3N2))]
Length=219
Score = 427 bits (1099), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIMLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACE78051.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAN04/2005(H3N2))]
gb|ACE78053.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAS07/2005(H3N2))]
gb|ACE78055.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAS09/2006(H3N2))]
Length=219
Score = 427 bits (1098), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLE LILLRAFTEEGAIVGEISPLPSLPGHT EDVKNA+GV
Sbjct 121 QAIMEKNIILKANFSVIFNRLEILILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAIGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAL29792.1| nonstructural protein [Influenza A virus (A/SW/MN/3327/00(H1N2))]
Length=219
Score = 427 bits (1098), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEE SETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEEPSETLKMTIASVPTSRYLTDMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABQ41893.1| nonstructural protein 1 [Influenza A virus (A/turkey/Illinois/2004(H3N2))]
gb|ABQ41903.1| nonstructural protein 1 [Influenza A virus (A/swine/North Carolina/2003(H3N2))]
Length=219
Score = 427 bits (1098), Expect = 4e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRK+FADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKQFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKE+SSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEKSSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACD35877.1| nonstructural protein 1 [Influenza A virus (A/turkey/North Carolina/353568/2005(H3N2))]
gb|ACD88653.1| nonstructural protein 1 [Influenza A virus (A/turkey/NC/353568/2005(H3N2))]
Length=219
Score = 427 bits (1097), Expect = 4e-118, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETL+LLRAFTEEGAIVGE+SPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLVLLRAFTEEGAIVGEVSPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAL87899.1|AF455708_1 nonstructural protein 1 [Influenza A virus (A/Swine/North Carolina/98225/01(H1N2))]
Length=219
Score = 427 bits (1097), Expect = 4e-118, Method: Compositional matrix adjust.
Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIM KNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMGKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABG34250.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/S5/2005(H1N2))]
Length=219
Score = 427 bits (1097), Expect = 5e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTS YL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSHYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFN+LETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNQLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACE78029.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAS08/2005(H1N1))]
Length=219
Score = 427 bits (1097), Expect = 5e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT +DVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNKDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRF WRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFTWRNRNEDGRPSLPPEQK 219
>gb|AAV80805.1| nonstructural protein 1 [Influenza A virus (A/turkey/North Carolina/12344/03(H3N2))]
Length=219
Score = 426 bits (1096), Expect = 5e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQ+IIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQRIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAI EKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAITEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABF17984.1| nonstructural protein 1 [Influenza A virus (A/Ontario/RV1273/2005(H3N2))]
gb|ABF17986.1| nonstructural protein 1 [Influenza A virus (A/swine/Alberta/14722/2005(H3N2))]
gb|ABF17990.1| nonstructural protein 1 [Influenza A virus (A/swine/Manitoba/12707/2005(H3N2))]
gb|ABF17992.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/33853/2005(H3N2))]
gb|ABF17994.1| nonstructural protein 1 [Influenza A virus (A/turkey/Ontario/31232/2005(H3N2))]
gb|ACF04397.1| nonstructural protein 1 [Influenza A virus (A/swine/Quebec/4001/2005(H3N2))]
Length=219
Score = 426 bits (1096), Expect = 5e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACF25591.1| nonstructural protein 1 [Influenza A virus (A/turkey/IA/21089-3/1992(H1N1))]
Length=219
Score = 426 bits (1096), Expect = 6e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAN46831.1| nonstructural protein [Influenza A virus (A/Swine/Korea/CY02/02(H1N2))]
Length=219
Score = 426 bits (1095), Expect = 7e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIET TLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETVTLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAL29791.1| nonstructural protein [Influenza A virus (A/SW/MN/12883/00(H1N2))]
Length=219
Score = 426 bits (1095), Expect = 7e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKN +LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNTILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABC59713.1| nonstructural protein [Influenza A virus (A/turkey/Ohio/313053/04(H3N2))]
Length=219
Score = 426 bits (1095), Expect = 8e-118, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+IGPLC R+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVIGPLCARMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABA46963.1| NS1 [Influenza A virus (A/swine/Minnesota/00395/2004(H3N1))]
Length=219
Score = 426 bits (1095), Expect = 8e-118, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGL+IETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLNIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNA+GV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAIGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRF WRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFTWRNRNEDGRPSLPPEQK 219
>gb|AAL29793.1| nonstructural protein [Influenza A virus (A/SW/MN/22860-T/01(H1N2))]
gb|AAL29794.1| nonstructural protein [Influenza A virus (A/SW/MN/22860-S/01(H1N2))]
Length=219
Score = 426 bits (1094), Expect = 9e-118, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKII LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIISSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIF RLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFTRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAG01772.1|AF251416_1 nonstructural protein 1 [Influenza A virus (A/Swine/Iowa/533/99
(H3N2))]
gb|AAG01790.1|AF251432_1 nonstructural protein 1 [Influenza A virus (A/Swine/Minnesota/593/99
(H3N2))]
gb|AAL29812.1| nonstructural protein [Influenza A virus (A/SW/NC/45319/99(H1N2))]
Length=219
Score = 426 bits (1094), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIMLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|ABF17988.1| nonstructural protein 1 [Influenza A virus (A/swine/British Columbia/28103/2005(H3N2))]
Length=219
Score = 425 bits (1092), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLE LILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLEALILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAO92928.1| nonstructural protein 1 [Influenza A virus (A/Chicken/NY/21665-73/98(H7N2))]
Length=219
Score = 425 bits (1092), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MT ASVPTSRYL+D+TLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTTASVPTSRYLADITLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVS+N+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSKNLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAC36140.1| nonstructural protein [Influenza A virus (A/swine/Iowa/17672/1988(H1N1))]
gb|ABR29600.1| nonstructural protein 1 [Influenza A virus (A/swine/Iowa/17672/1988(H1N1))]
gb|ABW71526.1| nonstructural protein 1 [Influenza A virus (A/swine/Iowa/24297/1991(H1N1))]
Length=219
Score = 424 bits (1091), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|AAL87909.1|AF455713_1 nonstructural protein 1 [Influenza A virus (A/Swine/Illinois/100085A/01
(H1N2))]
gb|AAL87911.1|AF455714_1 nonstructural protein 1 [Influenza A virus (A/Swine/Illinois/100084/01
(H1N2))]
Length=219
Score = 424 bits (1091), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDW MLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWLMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFN+LETLILLRAFTE+GAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNQLETLILLRAFTEQGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+G+PSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGKPSLPPEQK 219
>gb|AAV80808.1| nonstructural protein 1 [Influenza A virus (A/turkey/Minnesota/764-2/03(H3N2))]
Length=219
Score = 424 bits (1091), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQ+IIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQRIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAI EKNI+LKANFSVIFNRLETLILLRAFTEEGA VGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAITEKNIILKANFSVIFNRLETLILLRAFTEEGASVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABA27436.1| nonstructural protein [Influenza A virus (A/swine/MI/PU243/04
(H3N1))]
Length=219
Score = 424 bits (1090), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTS YL+DMTLEEMSRDWFMLMPRQKIIGPLCV++D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSSYLADMTLEEMSRDWFMLMPRQKIIGPLCVQMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACD88708.1| nonstructural protein 1 [Influenza A virus (A/turkey/NC/19762/1988(H1N1))]
Length=219
Score = 424 bits (1090), Expect = 3e-117, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATL+
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLI 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|ABG34257.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/S11/2005(H1N2))]
Length=219
Score = 424 bits (1090), Expect = 3e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTS YL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSHYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANF VIFN+LETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFIVIFNQLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABR29570.1| nonstructural protein 1 [Influenza A virus (A/swine/Maryland/23239/1991(H1N1))]
Length=219
Score = 424 bits (1090), Expect = 3e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRV EN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVPENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACF25601.1| nonstructural protein 1 [Influenza A virus (A/turkey/IA/10271-3/1990(H1N1))]
Length=219
Score = 424 bits (1089), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMT+EEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTIEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|ACD65215.1| nonstructural protein 1 [Influenza A virus (A/swine/Ohio/24366/07(H1N1))]
Length=217
Score = 424 bits (1089), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 204/217 (94%), Positives = 213/217 (98%), Gaps = 0/217 (0%)
Query 3 SNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVGK 62
SNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVGK
Sbjct 1 SNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVGK 60
Query 63 QIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLDQA 122
QIVEWIL+EESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGP CV++DQA
Sbjct 61 QIVEWILREESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPFCVQMDQA 120
Query 123 IMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGVLI 182
IMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGVLI
Sbjct 121 IMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGVLI 180
Query 183 GGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
GGLEWNGNTVR SEN+QRFAWRN +ENGRPSLPPEQK
Sbjct 181 GGLEWNGNTVRGSENLQRFAWRNRNENGRPSLPPEQK 217
>gb|AAL29811.1| nonstructural protein [Influenza A virus (A/SW/OH/7802/00(H1N2))]
Length=219
Score = 424 bits (1089), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKR ADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRLADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIMLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|AAL29807.1| nonstructural protein [Influenza A virus (A/SW/NE/21147/01(H1N2))]
gb|AAL29808.1| nonstructural protein [Influenza A virus (A/SW/MN/34893/01(H1N2))]
gb|AAL29809.1| nonstructural protein [Influenza A virus (A/SW/NE/18339/01(H1N2))]
gb|AAL29810.1| nonstructural protein [Influenza A virus (A/SW/MN/13130/00(H1N2))]
Length=219
Score = 423 bits (1088), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDC LWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCSLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MT ASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTNASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
L+GGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LVGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAL29795.1| nonstructural protein [Influenza A virus (A/SW/MN/3128/00(H1N2))]
Length=219
Score = 423 bits (1088), Expect = 4e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QA+MEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAMMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GR LPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRSPLPPEQK 219
>gb|ACE78027.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAN01/2004(H1N1))]
Length=219
Score = 423 bits (1088), Expect = 5e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHI KRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIPKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT +DVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNKDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRF WRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFTWRNRNEDGRPSLPPEQK 219
>gb|AAO88260.1| nonstructural protein 1 [Influenza A virus (A/Wisconsin/10/98
(H1N1))]
Length=219
Score = 423 bits (1088), Expect = 5e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDS T+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSTTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+ MTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLAGMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAI+EKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAILEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABY81725.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/JNS06/2004(H3N2))]
Length=219
Score = 423 bits (1088), Expect = 5e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFA+NGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFANNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWR+ +EN RPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSEDLQRFAWRSRNENERPSLPPEQK 219
>gb|ACD35870.1| nonstructural protein 1 [Influenza A virus (A/turkey/Minnesota/366767/2005(H3N2))]
gb|ACF25537.1| nonstructural protein 1 [Influenza A virus (A/turkey/MN/366767/2005(H3N2))]
Length=219
Score = 423 bits (1088), Expect = 5e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRK FADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKLFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAL29790.1| nonstructural protein [Influenza A virus (A/SW/AR/12491/00(H1N2))]
Length=219
Score = 423 bits (1088), Expect = 5e-117, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKG GNTLGLD ETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGSGNTLGLDTETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+IG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKMIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACI41027.1| nonstructural protein 1 [Influenza A virus (A/turkey/NC/17026/1988(H1N1))]
Length=219
Score = 423 bits (1087), Expect = 6e-117, Method: Compositional matrix adjust.
Identities = 203/219 (92%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATL+
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLI 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMP+QKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPKQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|AAL29796.1| nonstructural protein [Influenza A virus (A/SW/KS/13481-T/00(H1N2))]
gb|AAL29797.1| nonstructural protein [Influenza A virus (A/SW/KS/13481-S/00(H1N2))]
Length=219
Score = 423 bits (1087), Expect = 6e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT E+VKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDENVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGG EWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGPEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACE78031.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2))]
gb|ACE78033.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/JL01/2005(H1N2))]
gb|ACE78037.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/JL04/2005(H1N2))]
gb|ACE78039.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/Asan04/2006(H1N2))]
Length=219
Score = 422 bits (1086), Expect = 8e-117, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAI EKNI+LKANFSVIFNRLE LILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVG
Sbjct 121 QAITEKNIILKANFSVIFNRLENLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGA 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAU25874.1| nonstructural protein 1 [Influenza A virus (A/Swine/Wisconsin/238/97(H1N1))]
Length=219
Score = 422 bits (1086), Expect = 9e-117, Method: Compositional matrix adjust.
Identities = 205/219 (93%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIME NI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMENNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRP LP EQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPPLPSEQK 219
>gb|AAL87907.1|AF455712_1 nonstructural protein 1 [Influenza A virus (A/Swine/Indiana/P12439/00
(H1N2))]
Length=219
Score = 422 bits (1085), Expect = 9e-117, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVP SRYL+DMTLEEMSRDWFMLMPRQKII LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPNSRYLADMTLEEMSRDWFMLMPRQKIIRSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAI+GEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIIGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABR87891.1| nonstructural protein 1 [Influenza A virus (A/swine/Guangxi/13/2006(H1N2))]
Length=219
Score = 422 bits (1085), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 203/219 (92%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAI+EKNI+LKANFSVIFNRLETL+LLRAFTE GAIVGEISPLPSLPGHT EDVKNAVG+
Sbjct 121 QAIIEKNIILKANFSVIFNRLETLVLLRAFTEGGAIVGEISPLPSLPGHTDEDVKNAVGI 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACI26609.1| nonstructural protein 1 [Influenza A virus (A/swine/Memphis/1/1990(H1N1))]
Length=219
Score = 422 bits (1084), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEE +ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEEFNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|ABI19009.1| nonstructural protein 1 [Influenza A virus (A/Iowa/CEID23/2005(H1N1))]
Length=219
Score = 422 bits (1084), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 202/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDS T+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSTTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSR+WFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRNWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSV+FNRLETLILLRAFTEEG +VGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVVFNRLETLILLRAFTEEGTVVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABR29590.1| nonstructural protein 1 [Influenza A virus (A/swine/Wisconsin/1915/1988(H1N1))]
Length=219
Score = 422 bits (1084), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 203/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKE+S+ETL+M IASVPTSRYL+DM LEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEDSNETLKMAIASVPTSRYLADMALEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPSLPPEQK 219
>gb|AAB51007.1| nonstructural protein NS1 [Influenza A virus (A/swine/Hong Kong/273/1994(H1N1))]
Length=218
Score = 421 bits (1083), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 203/218 (93%), Positives = 215/218 (98%), Gaps = 0/218 (0%)
Query 2 DSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVG 61
DSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+T+GLDIETATLVG
Sbjct 1 DSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTIGLDIETATLVG 60
Query 62 KQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLDQ 121
KQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+DQ
Sbjct 61 KQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMDQ 120
Query 122 AIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGVL 181
AIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGVL
Sbjct 121 AIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGVL 180
Query 182 IGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
IGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 IGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 218
>gb|AAU25872.1| nonstructural protein 1 [Influenza A virus (A/Swine/Wisconsin/458/98(H1N1))]
gb|ABB86952.1| nonstructural protein 1 [Influenza A virus (A/swine/Wisconsin/464/98(H1N1))]
Length=219
Score = 421 bits (1083), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 203/219 (92%), Positives = 216/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWF+LMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFILMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFT+EGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTKEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|AAL29800.1| nonstructural protein [Influenza A virus (A/SW/MN/16356/01(H1N2))]
Length=219
Score = 421 bits (1083), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSE L+MTIAS+PTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSEILKMTIASIPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPS PPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSPPPEQK 219
>gb|AAL29804.1| nonstructural protein [Influenza A virus (A/SW/CO/17871/01(H1N2))]
Length=219
Score = 421 bits (1082), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 203/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPF+DRLRRDQKSLKGRGNTLG+DIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFIDRLRRDQKSLKGRGNTLGIDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+D+TLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADITLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIM KNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMGKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSL PEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLSPEQK 219
>gb|AAB03300.1| NS [Influenza A virus (A/WI/4755/1994(H1N1))]
Length=219
Score = 421 bits (1082), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 203/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+M IASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMAIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|ACI48766.1| nonstructural protein 1 [Influenza A virus (A/swine/Shanghai/1/2007(H1N2))]
Length=219
Score = 421 bits (1082), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 202/219 (92%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRK+FADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKQFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAI+EKNI+LKANFSVIFNRLETL+LLRAFTE GAIVGEISPLPSLPGHT EDVKNAVG+
Sbjct 121 QAIIEKNIILKANFSVIFNRLETLVLLRAFTEGGAIVGEISPLPSLPGHTDEDVKNAVGI 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACF04387.1| nonstructural protein 1 [Influenza A virus (A/mink/Nova Scotia/1055488/2007(H3N2))]
Length=219
Score = 421 bits (1081), Expect = 3e-116, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWN NTVR SEN+QRFAWRN +E+GR SLPPEQK
Sbjct 181 LIGGLEWNDNTVRGSENLQRFAWRNRNEDGRSSLPPEQK 219
>gb|ACE78035.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/JL02/2005(H1N2))]
gb|ACE78041.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/PZ4/2006(H1N2))]
gb|ACE78043.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/PZ7/2006(H1N2))]
gb|ACE78045.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/PZ14/2006(H1N2))]
gb|ACE78047.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CY08/2007(H1N2))]
Length=219
Score = 421 bits (1081), Expect = 3e-116, Method: Compositional matrix adjust.
Identities = 204/219 (93%), Positives = 212/219 (96%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKR ADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRVADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAI EKNI+LKANFSVIFNRLE LILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAITEKNIILKANFSVIFNRLENLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSL PEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLSPEQK 219
>gb|AAO65608.1| nonstructural protein 1 [Influenza A virus (A/duck/NC/91347/01(H1N2))]
Length=219
Score = 420 bits (1080), Expect = 4e-116, Method: Compositional matrix adjust.
Identities = 202/219 (92%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFAD+GLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATL
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADDGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLA 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIM KNI+LKANFSVIFNRLETL+LLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMGKNIILKANFSVIFNRLETLVLLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR+SE++QRFAWRN +E GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRISEDLQRFAWRNRNEGGRPSLPPEQK 219
>gb|ACK99415.1| nonstructural protein 1 [Influenza A virus (A/swine/Wisconsin/30954/1976(H1N1))]
Length=219
Score = 419 bits (1078), Expect = 6e-116, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATL
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLA 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVP+SRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPSSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+C+ENGRP LPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSCNENGRPPLPPEQK 219
>gb|ABY84689.1| nonstructural protein 1 [Influenza A virus (A/swine/California/T9001707/1991(H1N1))]
Length=219
Score = 419 bits (1078), Expect = 8e-116, Method: Compositional matrix adjust.
Identities = 203/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEE +ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEEFNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSL PEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLSPEQK 219
>gb|AAR90878.1| nonstructural protein [Influenza A virus (A/swine/Pingtung/7-12/1999(H1N2))]
Length=219
Score = 419 bits (1077), Expect = 8e-116, Method: Compositional matrix adjust.
Identities = 202/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFAD+GLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADSGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVRLD
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRLD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFN+LETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNQLETLILLRAFTEEGAIVGEISPLLSLPGHTGEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+C+ENGRPSL PEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSCNENGRPSLSPEQK 219
>gb|AAL29802.1| nonstructural protein [Influenza A virus (A/SW/MN/17138/01(H1N2))]
Length=219
Score = 419 bits (1076), Expect = 1e-115, Method: Compositional matrix adjust.
Identities = 203/219 (92%), Positives = 212/219 (96%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSE L+MTIAS+PTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSEILKMTIASIPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVK AVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKIAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWN NTVR SEN+QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNSNTVRGSENLQRFAWRNRNEDGRPSLPPEQK 219
>gb|AAB50997.1| nonstructural protein NS1 [Influenza A virus (A/swine/Iowa/17672/1988(H1N1))]
Length=216
Score = 419 bits (1076), Expect = 1e-115, Method: Compositional matrix adjust.
Identities = 202/216 (93%), Positives = 213/216 (98%), Gaps = 0/216 (0%)
Query 4 NTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVGKQ 63
NT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLVGKQ
Sbjct 1 NTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLVGKQ 60
Query 64 IVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLDQAI 123
IVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+DQAI
Sbjct 61 IVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMDQAI 120
Query 124 MEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIG 183
MEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGVLIG
Sbjct 121 MEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGVLIG 180
Query 184 GLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
GLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 GLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 216
>gb|ABY70962.1| nonstructural protein 1 [Influenza A virus (A/Ontario/1252/2007(H3N2))]
Length=219
Score = 418 bits (1075), Expect = 1e-115, Method: Compositional matrix adjust.
Identities = 202/219 (92%), Positives = 212/219 (96%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDI TATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIGTATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSV+FNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVVFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRF WRN +E+GRPSLP EQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFTWRNRNEDGRPSLPSEQK 219
>gb|AAB03299.1| NS [Influenza A virus (A/WI/4754/1994(H1N1))]
Length=219
Score = 418 bits (1075), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 202/219 (92%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLG DIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGPDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+M IASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMAIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|AAL29803.1| nonstructural protein [Influenza A virus (A/SW/NC/17366/01(H1N2))]
Length=219
Score = 418 bits (1074), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGD PFLDRLRRDQKSLKGRG TLGLDI+TATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDVPFLDRLRRDQKSLKGRGTTLGLDIKTATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGE+SPLPSLPGHT ED+KNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEVSPLPSLPGHTDEDIKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWRN +E+GR SLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRSSLPPEQK 219
>gb|ABY40427.1| nonstructural protein 1 [Influenza A virus (A/swine/Missouri/2124514/2006(H2N3))]
Length=219
Score = 417 bits (1073), Expect = 3e-115, Method: Compositional matrix adjust.
Identities = 201/219 (91%), Positives = 212/219 (96%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDS T+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSTTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDW MLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWLMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEG IVGEIS LPSLPGHT EDVKNA+GV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGTIVGEISQLPSLPGHTNEDVKNAIGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPE+K
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEKK 219
>gb|AAG01781.1|AF251424_1 nonstructural protein 1 [Influenza A virus (A/Swine/Iowa/569/99
(H3N2))]
Length=219
Score = 417 bits (1072), Expect = 3e-115, Method: Compositional matrix adjust.
Identities = 203/219 (92%), Positives = 212/219 (96%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDS + SFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSPLVPSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIMLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|ACF17154.1| nonstructural protein 1 [Influenza A virus (A/swine/Hainan/1/2005(H1N2))]
Length=219
Score = 417 bits (1072), Expect = 4e-115, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRK+FADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIE ATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKQFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIEKATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWF+LMPRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFILMPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAI+EKNI+LKANFSVIFNRLETL+LLRAFTE GAIVGEISPLPSLPGHT EDVKNAVG+
Sbjct 121 QAIIEKNIILKANFSVIFNRLETLVLLRAFTEGGAIVGEISPLPSLPGHTDEDVKNAVGI 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ACE78061.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CY07/2007(H3N2))]
Length=219
Score = 417 bits (1071), Expect = 4e-115, Method: Compositional matrix adjust.
Identities = 202/219 (92%), Positives = 210/219 (95%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGITLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSET +M IASVPTSRYL+DMTLEEMSRDWFMLMPRQK IG LCVR+D
Sbjct 61 GKQIVEWILKEESSETHKMIIASVPTSRYLADMTLEEMSRDWFMLMPRQKTIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKN++LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAV V
Sbjct 121 QAIMEKNVILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVEV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +ENGRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRSSENLQRFAWRNRNENGRPSLPPEQK 219
>gb|ACF17149.1| nonstructural protein 1 [Influenza A virus (A/swine/Guangxi/17/2005(H1N2))]
Length=219
Score = 417 bits (1071), Expect = 5e-115, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 215/219 (98%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRK+FADNGLGDAPFLDRLRRD+KSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKQFADNGLGDAPFLDRLRRDRKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFML+PRQKIIG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLVPRQKIIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAI+EKNI+LKANFSVIFNRLETL+LLRAFTE GAIVGEISPLPSLPGHT EDVKNAVG+
Sbjct 121 QAIIEKNIILKANFSVIFNRLETLVLLRAFTEGGAIVGEISPLPSLPGHTGEDVKNAVGI 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK 219
>gb|ABR28663.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/4/1981(H1N1))]
gb|ABR28674.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/7/1981(H1N1))]
gb|ABR28718.1| nonstructural protein 1 [Influenza A virus (A/swine/Wisconsin/11/1980(H1N1))]
gb|ABW36338.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/2/1981(H1N1))]
gb|ABW36349.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/3/1981(H1N1))]
Length=219
Score = 416 bits (1070), Expect = 5e-115, Method: Compositional matrix adjust.
Identities = 201/219 (91%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKMTGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|ABQ45419.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/3/1976(H1N1))]
gb|ABQ45430.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/7/1976(H1N1))]
gb|ABW36371.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/10/1976(H1N1))]
Length=219
Score = 416 bits (1070), Expect = 5e-115, Method: Compositional matrix adjust.
Identities = 199/219 (90%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATL
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLA 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVP+SRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPSSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+C+ENGRP LPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSCNENGRPPLPPEQK 219
>gb|ACE78065.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CY10/2007(H3N2))]
Length=219
Score = 416 bits (1070), Expect = 6e-115, Method: Compositional matrix adjust.
Identities = 202/219 (92%), Positives = 210/219 (95%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG TLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGITLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSETL+M IASVPTSRYL+DMTLEEMSRDWFMLMPRQK IG LCVR+D
Sbjct 61 GKQIVEWILKEESSETLKMIIASVPTSRYLADMTLEEMSRDWFMLMPRQKTIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKN++LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAV V
Sbjct 121 QAIMEKNVILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVEV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR EN+QRFAWRN +ENGRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRSFENLQRFAWRNRNENGRPSLPPEQK 219
>gb|ABY40442.1| nonstructural protein 1 [Influenza A virus (A/swine/Missouri/4296424/2006(H2N3))]
Length=219
Score = 416 bits (1068), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 212/219 (96%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDS T+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSTTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEE+SRDW MLMPRQKIIGPLCVR+D
Sbjct 61 GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEISRDWLMLMPRQKIIGPLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEG IVGEIS LPSLPGHT EDVKNA+GV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGTIVGEISQLPSLPGHTNEDVKNAIGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPE+K
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEKK 219
>gb|ABL75553.1| NS1 protein [Influenza A virus (A/swine/Guangdong/3/2005(H1N1))]
Length=219
Score = 416 bits (1068), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNTMSSFQVDCF+WHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+T+GLDIETATLV
Sbjct 1 MDSNTMSSFQVDCFIWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTIGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPR K+IG L +R+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRGKMIGSLYLRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|AAZ79396.1| nonstructural protein 1 [Influenza A virus (A/swine/Zhejiang/1/2004(H1N2))]
Length=219
Score = 416 bits (1068), Expect = 1e-114, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 212/219 (96%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTS YL+DMTLEEMSRDWFMLMPRQKIIG LC+R+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSHYLADMTLEEMSRDWFMLMPRQKIIGSLCMRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QA MEKNI+LKANFSV+FNRLETLILLRAF+EEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QATMEKNIILKANFSVVFNRLETLILLRAFSEEGAIVGEISPLPSLPGHTEEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWN NTVRVSEN+QRFAWR +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNDNTVRVSENLQRFAWRIRNEDGRPSLPPEQK 219
>gb|AAL29789.1| nonstructural protein [Influenza A virus (A/SW/MO/18777/01(H1N2))]
Length=219
Score = 415 bits (1066), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 201/219 (91%), Positives = 211/219 (96%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEESSE L+MTIAS+PTSRYL+DMTLEEMSRDWFMLMPRQKII LCVR+
Sbjct 61 GKQIVEWILKEESSEILKMTIASIPTSRYLADMTLEEMSRDWFMLMPRQKIISSLCVRMG 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRL+TLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLKTLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPS PPEQK
Sbjct 181 LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSPPPEQK 219
>gb|ABS50126.1| nonstructural protein 1 [Influenza A virus (A/swine/Iowa/31483/1988(H1N1))]
Length=219
Score = 414 bits (1065), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+M+IASVPTSRYL+DM+LEEMSRDWFMLMPRQKI G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMSIASVPTSRYLADMSLEEMSRDWFMLMPRQKITGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRPSL PEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPSLSPEQK 219
>gb|ABY51209.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/4/1978(H1N1))]
Length=219
Score = 414 bits (1065), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVTGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRP LPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPPLPPEQK 219
>gb|ABR28586.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/82/1977(H1N1))]
gb|ABU80226.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/84/1977(H1N1))]
gb|ABU80248.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/87/1977(H1N1))]
gb|ABU80259.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/88/1977(H1N1))]
Length=219
Score = 414 bits (1065), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRP LPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPPLPPEQK 219
>gb|ABW86579.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/5/1978(H1N1))]
Length=219
Score = 414 bits (1065), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDV+NAVGV
Sbjct 121 QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVENAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWRN +ENGRP LPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRNRNENGRPPLPPEQK 219
>gb|ABR29580.1| nonstructural protein 1 [Influenza A virus (A/swine/Kansas/3228/1987(H1N1))]
gb|ABU80425.1| nonstructural protein 1 [Influenza A virus (A/swine/Kansas/3024/1987(H1N1))]
Length=219
Score = 414 bits (1065), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DM+LEEMSRDWFMLMPRQKI G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMSLEEMSRDWFMLMPRQKITGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSL PEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLSPEQK 219
>gb|ACD88697.1| nonstructural protein 1 [Influenza A virus (A/chicken/PA/35154/1991(H1N1))]
Length=219
Score = 414 bits (1065), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVTGSLCVRID 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRP LPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPPLPPEQK 219
>dbj|BAH02166.1| nonstructural protein 1 [Influenza A virus (A/swine/Niigata/1/1977(H1N1))]
Length=219
Score = 414 bits (1064), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 198/219 (90%), Positives = 213/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATL
Sbjct 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLA 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVP+SRYL+DMTLEEMSRDWFMLMPRQK++G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPSSRYLADMTLEEMSRDWFMLMPRQKVVGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIF+RLETLILL+AFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFDRLETLILLKAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRP LPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPPLPPEQK 219
>gb|ABQ45463.1| nonstructural protein 1 [Influenza A virus (A/swine/Iowa/1/1976(H1N1))]
Length=219
Score = 414 bits (1064), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 198/219 (90%), Positives = 212/219 (96%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATL
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLA 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVP+SRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPSSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+C+ENGR LPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSCNENGRSPLPPEQK 219
>gb|ABR22245.1| nonstructural protein 1 [Influenza A virus (A/Swine/Guangdong/01/2005(H3N2))]
Length=219
Score = 414 bits (1063), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 199/219 (90%), Positives = 214/219 (97%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCF+WHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+T+GLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFIWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTIGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPR K+IG L +R+D
Sbjct 61 GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRGKMIGSLYLRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK 219
>gb|AAL29801.1| nonstructural protein [Influenza A virus (A/SW/MN/16419/01(H1N2))]
Length=219
Score = 414 bits (1063), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 201/219 (91%), Positives = 210/219 (95%), Gaps = 0/219 (0%)
Query 1 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV
Sbjct 1 MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV 60
Query 61 GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD 120
GKQIVEWILK ESSETL+MTIASV TSRYL+DMTLEEMSRDWFMLMPRQK+IG LCVR+D
Sbjct 61 GKQIVEWILKGESSETLKMTIASVHTSRYLADMTLEEMSRDWFMLMPRQKVIGSLCVRMD 120
Query 121 QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV 180
QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGH EDVKNAVGV
Sbjct 121 QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHIDEDVKNAVGV 180
Query 181 LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK 219
LIGGLEWNGNTVRVSE++QR WRN E+GRPSLPPEQK
Sbjct 181 LIGGLEWNGNTVRVSESLQRSTWRNRTEDGRPSLPPEQK 219
NS2 Protein Structural Homolgy ModelNS2 Protein Structural Homolgy Model
|
NS2 Sequence PolymorphismsNS2 Sequence Polymorphisms
| Protein | Polymorphism | Strain with Polymorphism | Number of Strains with Polymorphism | |
| NS2 | E63K | 229783374_A/Korea/01/2009 | 1 | |
| NS2 | E67K | 229598887_A/Texas/15/2009 | 1 | |
| NS2 | A89E | 228017754_A/California/06/2 | 3 | |
| NS2 | A115T | 229892755_A/Canada-NS/RV153 | 1 |
NS2 Multiple Sequence AlignmentNS2 Multiple Sequence Alignment
H1N1 Swine Flu Multiple Sequence Alignment of NS2 Protein, 53 sequences
gi|229299513_A/Texas/05/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229368685_A/Denmark/513/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|227831790_A/Texas/05/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229299533_A/Texas/04/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|227977168_A/California/07/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|227977144_A/California/07/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|227977112_A/California/04/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|227809840_A/California/04/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|227977156_A/California/08/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|227977124_A/California/08/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396499_A/Ohio/07/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229536008_A/Kansas/03/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396476_A/New_York/19/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396461_A/Texas/06/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396401_A/New_York/31/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396412_A/New_York/23/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396386_A/New_York/18/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396448_A/New_York/15/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396350_A/New_York/12/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396372_A/New_York/11/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396432_A/New_York/10/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229396362_A/New_York/06/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229484057_A/Mexico/InDRE448 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229484060_A/Canada-ON/RV152 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229484055_A/Canada-NS/RV153 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229462704_A/Valencia/GP4/20 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229462716_A/Pais_Vasco/GP20 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229462728_A/Castilla-La_Man MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229462692_A/Castilla-La_Man MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229535810_A/Texas/09/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229535992_A/South_Carolina/ MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229536032_A/Minnesota/02/20 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229536116_A/Michigan/02/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229535828_A/California/14/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229536017_A/Arizona/01/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229783408_A/New_York/1682/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229783387_A/New_York/1669/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229892757_A/Mexico/InDRE411 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229892760_A/Canada-ON/RV152 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229892769_A/Canada-ON/RV152 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229892766_A/Canada-NS/RV153 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229892763_A/Canada-AB/RV153 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|237511857_A/Mexico/4604/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|237511866_A/Mexico/4603/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|237511860_A/Mexico/4486/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|237511872_A/Mexico/4115/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|237511869_A/Mexico/4108/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229783374_A/Korea/01/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229892755_A/Canada-NS/RV153 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229598887_A/Texas/15/2009 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|228017754_A/California/06/2 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|229536106_A/Nebraska/02/200 MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
gi|237624336_A/swine/Alberta/O MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50
**************************************************
gi|229299513_A/Texas/05/2009 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229368685_A/Denmark/513/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|227831790_A/Texas/05/2009 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229299533_A/Texas/04/2009 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|227977168_A/California/07/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|227977144_A/California/07/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|227977112_A/California/04/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|227809840_A/California/04/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|227977156_A/California/08/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|227977124_A/California/08/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396499_A/Ohio/07/2009 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229536008_A/Kansas/03/2009 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396476_A/New_York/19/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396461_A/Texas/06/2009 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396401_A/New_York/31/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396412_A/New_York/23/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396386_A/New_York/18/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396448_A/New_York/15/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396350_A/New_York/12/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396372_A/New_York/11/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396432_A/New_York/10/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229396362_A/New_York/06/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229484057_A/Mexico/InDRE448 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229484060_A/Canada-ON/RV152 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229484055_A/Canada-NS/RV153 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229462704_A/Valencia/GP4/20 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229462716_A/Pais_Vasco/GP20 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229462728_A/Castilla-La_Man RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229462692_A/Castilla-La_Man RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229535810_A/Texas/09/2009 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229535992_A/South_Carolina/ RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229536032_A/Minnesota/02/20 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229536116_A/Michigan/02/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229535828_A/California/14/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229536017_A/Arizona/01/2009 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229783408_A/New_York/1682/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229783387_A/New_York/1669/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229892757_A/Mexico/InDRE411 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229892760_A/Canada-ON/RV152 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229892769_A/Canada-ON/RV152 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229892766_A/Canada-NS/RV153 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229892763_A/Canada-AB/RV153 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|237511857_A/Mexico/4604/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|237511866_A/Mexico/4603/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|237511860_A/Mexico/4486/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|237511872_A/Mexico/4115/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|237511869_A/Mexico/4108/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229783374_A/Korea/01/2009 RMGDLHYLQSRNKKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229892755_A/Canada-NS/RV153 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|229598887_A/Texas/15/2009 RMGDLHYLQSRNEKWRKQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100
gi|228017754_A/California/06/2 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKETENSFEQITFM 100
gi|229536106_A/Nebraska/02/200 RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKETENSFEQITFM 100
gi|237624336_A/swine/Alberta/O RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKETENSFEQITFM 100
************:***:********************* ***********
gi|229299513_A/Texas/05/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|229368685_A/Denmark/513/200 QALQLLLEVEQEIRAFS---- 117
gi|227831790_A/Texas/05/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|229299533_A/Texas/04/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|227977168_A/California/07/2 QALQLLLEVEQEIRAFSFQLI 121
gi|227977144_A/California/07/2 QALQLLLEVEQEIRAFSFQLI 121
gi|227977112_A/California/04/2 QALQLLLEVEQEIRAFSFQLI 121
gi|227809840_A/California/04/2 QALQLLLEVEQEIRAFSFQLI 121
gi|227977156_A/California/08/2 QALQLLLEVEQEIRAFSFQLI 121
gi|227977124_A/California/08/2 QALQLLLEVEQEIRAFSFQLI 121
gi|229396499_A/Ohio/07/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|229536008_A/Kansas/03/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|229396476_A/New_York/19/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229396461_A/Texas/06/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|229396401_A/New_York/31/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229396412_A/New_York/23/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229396386_A/New_York/18/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229396448_A/New_York/15/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229396350_A/New_York/12/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229396372_A/New_York/11/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229396432_A/New_York/10/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229396362_A/New_York/06/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229484057_A/Mexico/InDRE448 QALQLLLEVEQEIRAFSFQLI 121
gi|229484060_A/Canada-ON/RV152 QALQLLLEVEQEIRAFSFQLI 121
gi|229484055_A/Canada-NS/RV153 QALQLLLEVEQEIRAFSFQLI 121
gi|229462704_A/Valencia/GP4/20 QALQLLLEVEQEIRAFSFQLI 121
gi|229462716_A/Pais_Vasco/GP20 QALQLLLEVEQEIRAFSFQLI 121
gi|229462728_A/Castilla-La_Man QALQLLLEVEQEIRAFSFQLI 121
gi|229462692_A/Castilla-La_Man QALQLLLEVEQEIRAFSFQLI 121
gi|229535810_A/Texas/09/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|229535992_A/South_Carolina/ QALQLLLEVEQEIRAFSFQLI 121
gi|229536032_A/Minnesota/02/20 QALQLLLEVEQEIRAFSFQLI 121
gi|229536116_A/Michigan/02/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229535828_A/California/14/2 QALQLLLEVEQEIRAFSFQLI 121
gi|229536017_A/Arizona/01/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|229783408_A/New_York/1682/2 QALQLLLEVEQEIRAFSFQLI 121
gi|229783387_A/New_York/1669/2 QALQLLLEVEQEIRAFSFQLI 121
gi|229892757_A/Mexico/InDRE411 QALQLLLEVEQEIRAFSFQLI 121
gi|229892760_A/Canada-ON/RV152 QALQLLLEVEQEIRAFSFQLI 121
gi|229892769_A/Canada-ON/RV152 QALQLLLEVEQEIRAFSFQLI 121
gi|229892766_A/Canada-NS/RV153 QALQLLLEVEQEIRAFSFQLI 121
gi|229892763_A/Canada-AB/RV153 QALQLLLEVEQEIRAFSFQLI 121
gi|237511857_A/Mexico/4604/200 QALQLLLEVEQEIRAFSFQLI 121
gi|237511866_A/Mexico/4603/200 QALQLLLEVEQEIRAFSFQLI 121
gi|237511860_A/Mexico/4486/200 QALQLLLEVEQEIRAFSFQLI 121
gi|237511872_A/Mexico/4115/200 QALQLLLEVEQEIRAFSFQLI 121
gi|237511869_A/Mexico/4108/200 QALQLLLEVEQEIRAFSFQLI 121
gi|229783374_A/Korea/01/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|229892755_A/Canada-NS/RV153 QALQLLLEVEQEIRTFSFQLI 121
gi|229598887_A/Texas/15/2009 QALQLLLEVEQEIRAFSFQLI 121
gi|228017754_A/California/06/2 QALQLLLEVEQEIRAFSFQLI 121
gi|229536106_A/Nebraska/02/200 QALQLLLEVEQEIRAFSFQLI 121
gi|237624336_A/swine/Alberta/O QALQLLLEVEQEIRAFSFQLI 121
**************:**