User:Michael Strong/H1N1/HA
< User:Michael Strong | H1N1
Protein Structural Homolgy ModelProtein Structural Homolgy Model
|
Sequence PolymorphismsSequence Polymorphisms
| Protein | Polymorphism | Strain with Polymorphism | Number of Strains with Polymorphism | |
| HA | V7I | 237624327_A/swine/Alberta/O | 1 | |
| HA | L8M | 227831776_A/California/06/2 | 5 | |
| HA | A13T | 229536010_A/Kansas/03/2009 | 1 | |
| HA | N48D | 229536049_A/Arizona/02/2009 | 1 | |
| HA | L49I | 229535997_A/South_Carolina/ | 2 | |
| HA | I96V | 229598877_A/Ohio/07/2009 | 1 | |
| HA | S100P | 229535949_A/California/04/2 | 5 | |
| HA | N104K | 229892708_A/Canada-AB/RV153 | 1 | |
| HA | V125M | 229598896_A/Texas/15/2009 | 2 | |
| HA | V149I | 229536088_A/Indiana/09/2009 | 1 | |
| HA | A214T | 229535949_A/California/04/2 | 2 | |
| HA | Y215N | 237624327_A/swine/Alberta/O | 1 | |
| HA | S220T | 229396494_A/Ohio/07/2009 | 21 | |
| HA | F227L | 229598896_A/Texas/15/2009 | 1 | |
| HA | D239G | 229892706A/Mexico/InDRE4114 | 1 | |
| HA | D291E | 229535997_A/South_Carolina/ | 2 | |
| HA | N293D | 229783398_A/New_York/1682/2 | 1 | |
| HA | V338I | 229535949_A/California/04/2 | 5 | |
| HA | A351V | 237624327_A/swine/Alberta/O | 1 | |
| HA | I400V | 229484027_A/Canada-NS/RV153 | 3 | |
| HA | V428I | 229598877_A/Ohio/07/2009 | 4 | |
| HA | V444I | 237511819_A/Mexico/4108/200 | 1 | |
| HA | I527F | 229892706A/Mexico/InDRE4114 | 1 |
Multiple Sequence AlignmentMultiple Sequence Alignment
H1N1 Swine Flu Multiple Sequence Alignment of HA Protein, 68 sequences
gi|229396357_A/New_York/12/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229892708_A/Canada-AB/RV153 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229396399_A/New_York/18/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536064_A/New_York/20/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536055_A/New_York/20/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229396487_A/New_York/19/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|227977099_A/New_York/19/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229396410_A/New_York/31/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229396419_A/New_York/23/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229396381_A/New_York/11/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229396443_A/New_York/10/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229484031_A/Canada-ON/RV152 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229535797_A/New_York/22/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536129_A/New_York/13/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536100_A/Massachusetts/0 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229535909_A/Massachusetts/0 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229535834_A/California/14/2 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229892704_A/Canada-ON/RV152 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229598877_A/Ohio/07/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229396504_A/Ohio/07/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229396494_A/Ohio/07/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229892702_A/Canada-ON/RV152 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229783398_A/New_York/1682/2 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|237511819_A/Mexico/4108/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536049_A/Arizona/02/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVDLL 50
gi|229536088_A/Indiana/09/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229484027_A/Canada-NS/RV153 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229892700_A/Canada-NS/RV153 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229892710_A/Canada-NS/RV153 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|237511821_A/Mexico/4115/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|237511811_A/Mexico/4482/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|237511799_A/Mexico/4486/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|237511817_A/Mexico/4603/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|237511795_A/Mexico/4604/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229783367_A/Korea/01/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229783377_A/New_York/1669/2 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536022_A/Arizona/01/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536003_A/Kansas/02/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536121_A/Michigan/02/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229598896_A/Texas/15/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229609563_A/Catalonia/P154/ -------------------------ANNSTDTVDTVLEKNVTVTHSVNLL 25
gi|229299521_A/Texas/04/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|228860929_A/Netherlands/602 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229484029_A/Mexico/InDRE448 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229535997_A/South_Carolina/ MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNIL 50
gi|229609557_A/Catalonia/P148/ ------------------------HANNSTDTVDTVLEKNVTVTHSVNIL 26
gi|229299515_A/Texas/04/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229396467_A/Texas/06/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229535816_A/Texas/09/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229535985_A/Texas/08/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536075_A/Texas/07/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229368677_A/Denmark/513/200 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|227831826_A/Texas/04/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|227831774_A/Texas/05/2009 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|227831776_A/California/06/2 MKAILVVMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|227831759_A/California/05/2 MKAILVVMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|227977104_A/California/10/2 MKAILVVMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536135_A/Colorado/03/200 MKAILVVMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|228481046_A/Auckland/1/2009 ------------------------------------------VTHSVNLL 8
gi|237624327_A/swine/Alberta/O MKAILVIMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229536010_A/Kansas/03/2009 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|228495370_A/Regensburg/Germ ----------------------------------------VTVTHSVNLL 10
gi|229892706A/Mexico/InDRE4114 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229535949_A/California/04/2 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|227809830_A/California/04/2 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|229299517_A/California/07/2 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|228017758_A/California/08/2 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
gi|227977172_A/California/07/2 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50
*****::*
gi|229396357_A/New_York/12/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229892708_A/Canada-AB/RV153 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229396399_A/New_York/18/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536064_A/New_York/20/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536055_A/New_York/20/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229396487_A/New_York/19/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|227977099_A/New_York/19/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229396410_A/New_York/31/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229396419_A/New_York/23/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229396381_A/New_York/11/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229396443_A/New_York/10/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229484031_A/Canada-ON/RV152 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229535797_A/New_York/22/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536129_A/New_York/13/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536100_A/Massachusetts/0 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229535909_A/Massachusetts/0 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229535834_A/California/14/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229892704_A/Canada-ON/RV152 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229598877_A/Ohio/07/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYVVETS 100
gi|229396504_A/Ohio/07/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229396494_A/Ohio/07/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229892702_A/Canada-ON/RV152 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229783398_A/New_York/1682/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|237511819_A/Mexico/4108/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536049_A/Arizona/02/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536088_A/Indiana/09/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229484027_A/Canada-NS/RV153 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229892700_A/Canada-NS/RV153 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229892710_A/Canada-NS/RV153 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|237511821_A/Mexico/4115/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|237511811_A/Mexico/4482/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|237511799_A/Mexico/4486/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|237511817_A/Mexico/4603/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|237511795_A/Mexico/4604/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229783367_A/Korea/01/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229783377_A/New_York/1669/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536022_A/Arizona/01/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536003_A/Kansas/02/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536121_A/Michigan/02/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229598896_A/Texas/15/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229609563_A/Catalonia/P154/ EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 75
gi|229299521_A/Texas/04/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|228860929_A/Netherlands/602 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229484029_A/Mexico/InDRE448 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229535997_A/South_Carolina/ EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229609557_A/Catalonia/P148/ EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 76
gi|229299515_A/Texas/04/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229396467_A/Texas/06/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229535816_A/Texas/09/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229535985_A/Texas/08/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536075_A/Texas/07/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229368677_A/Denmark/513/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|227831826_A/Texas/04/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|227831774_A/Texas/05/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|227831776_A/California/06/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|227831759_A/California/05/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|227977104_A/California/10/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536135_A/Colorado/03/200 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|228481046_A/Auckland/1/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 58
gi|237624327_A/swine/Alberta/O EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229536010_A/Kansas/03/2009 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|228495370_A/Regensburg/Germ EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 60
gi|229892706A/Mexico/InDRE4114 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100
gi|229535949_A/California/04/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100
gi|227809830_A/California/04/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100
gi|229299517_A/California/07/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100
gi|228017758_A/California/08/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100
gi|227977172_A/California/07/2 EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100
*********************************************:***.
gi|229396357_A/New_York/12/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229892708_A/Canada-AB/RV153 SSDKGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229396399_A/New_York/18/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536064_A/New_York/20/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536055_A/New_York/20/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229396487_A/New_York/19/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|227977099_A/New_York/19/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229396410_A/New_York/31/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229396419_A/New_York/23/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229396381_A/New_York/11/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229396443_A/New_York/10/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229484031_A/Canada-ON/RV152 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229535797_A/New_York/22/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536129_A/New_York/13/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536100_A/Massachusetts/0 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229535909_A/Massachusetts/0 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229535834_A/California/14/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229892704_A/Canada-ON/RV152 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229598877_A/Ohio/07/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHXSNKGVT 150
gi|229396504_A/Ohio/07/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229396494_A/Ohio/07/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229892702_A/Canada-ON/RV152 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229783398_A/New_York/1682/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|237511819_A/Mexico/4108/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536049_A/Arizona/02/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536088_A/Indiana/09/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGIT 150
gi|229484027_A/Canada-NS/RV153 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229892700_A/Canada-NS/RV153 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229892710_A/Canada-NS/RV153 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|237511821_A/Mexico/4115/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|237511811_A/Mexico/4482/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|237511799_A/Mexico/4486/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|237511817_A/Mexico/4603/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|237511795_A/Mexico/4604/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229783367_A/Korea/01/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229783377_A/New_York/1669/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536022_A/Arizona/01/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536003_A/Kansas/02/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536121_A/Michigan/02/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229598896_A/Texas/15/2009 SSDNGTCYPGDFIDYEELREQLSSMSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229609563_A/Catalonia/P154/ SSDNGTCYPGDFIDYEELREQLSSMSSFERFEIFPKTSSWPNHDSNKGVT 125
gi|229299521_A/Texas/04/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|228860929_A/Netherlands/602 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229484029_A/Mexico/InDRE448 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229535997_A/South_Carolina/ SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229609557_A/Catalonia/P148/ SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 126
gi|229299515_A/Texas/04/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229396467_A/Texas/06/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229535816_A/Texas/09/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229535985_A/Texas/08/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536075_A/Texas/07/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229368677_A/Denmark/513/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|227831826_A/Texas/04/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|227831774_A/Texas/05/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|227831776_A/California/06/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|227831759_A/California/05/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|227977104_A/California/10/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536135_A/Colorado/03/200 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|228481046_A/Auckland/1/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 108
gi|237624327_A/swine/Alberta/O SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229536010_A/Kansas/03/2009 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|228495370_A/Regensburg/Germ SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 110
gi|229892706A/Mexico/InDRE4114 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229535949_A/California/04/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|227809830_A/California/04/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|229299517_A/California/07/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|228017758_A/California/08/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
gi|227977172_A/California/07/2 SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150
***:********************:****************** ****:*
gi|229396357_A/New_York/12/200 XACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229892708_A/Canada-AB/RV153 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229396399_A/New_York/18/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536064_A/New_York/20/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536055_A/New_York/20/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229396487_A/New_York/19/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|227977099_A/New_York/19/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229396410_A/New_York/31/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229396419_A/New_York/23/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229396381_A/New_York/11/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229396443_A/New_York/10/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229484031_A/Canada-ON/RV152 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229535797_A/New_York/22/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536129_A/New_York/13/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536100_A/Massachusetts/0 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229535909_A/Massachusetts/0 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229535834_A/California/14/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229892704_A/Canada-ON/RV152 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229598877_A/Ohio/07/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229396504_A/Ohio/07/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229396494_A/Ohio/07/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229892702_A/Canada-ON/RV152 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229783398_A/New_York/1682/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|237511819_A/Mexico/4108/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536049_A/Arizona/02/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536088_A/Indiana/09/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229484027_A/Canada-NS/RV153 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229892700_A/Canada-NS/RV153 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229892710_A/Canada-NS/RV153 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|237511821_A/Mexico/4115/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|237511811_A/Mexico/4482/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|237511799_A/Mexico/4486/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|237511817_A/Mexico/4603/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|237511795_A/Mexico/4604/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229783367_A/Korea/01/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229783377_A/New_York/1669/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536022_A/Arizona/01/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536003_A/Kansas/02/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536121_A/Michigan/02/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229598896_A/Texas/15/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229609563_A/Catalonia/P154/ AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 175
gi|229299521_A/Texas/04/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|228860929_A/Netherlands/602 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229484029_A/Mexico/InDRE448 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229535997_A/South_Carolina/ AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229609557_A/Catalonia/P148/ AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 176
gi|229299515_A/Texas/04/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229396467_A/Texas/06/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229535816_A/Texas/09/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229535985_A/Texas/08/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536075_A/Texas/07/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229368677_A/Denmark/513/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|227831826_A/Texas/04/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|227831774_A/Texas/05/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|227831776_A/California/06/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|227831759_A/California/05/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|227977104_A/California/10/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536135_A/Colorado/03/200 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|228481046_A/Auckland/1/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 158
gi|237624327_A/swine/Alberta/O AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229536010_A/Kansas/03/2009 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|228495370_A/Regensburg/Germ AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 160
gi|229892706A/Mexico/InDRE4114 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229535949_A/California/04/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|227809830_A/California/04/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|229299517_A/California/07/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|228017758_A/California/08/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
gi|227977172_A/California/07/2 AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200
*************************************************
gi|229396357_A/New_York/12/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229892708_A/Canada-AB/RV153 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229396399_A/New_York/18/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536064_A/New_York/20/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536055_A/New_York/20/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229396487_A/New_York/19/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|227977099_A/New_York/19/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229396410_A/New_York/31/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229396419_A/New_York/23/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229396381_A/New_York/11/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229396443_A/New_York/10/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229484031_A/Canada-ON/RV152 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229535797_A/New_York/22/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536129_A/New_York/13/200 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536100_A/Massachusetts/0 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229535909_A/Massachusetts/0 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229535834_A/California/14/2 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229892704_A/Canada-ON/RV152 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229598877_A/Ohio/07/2009 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229396504_A/Ohio/07/2009 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229396494_A/Ohio/07/2009 TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229892702_A/Canada-ON/RV152 TSADQQSLYQNADAYVFVGXSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229783398_A/New_York/1682/2 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|237511819_A/Mexico/4108/200 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536049_A/Arizona/02/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536088_A/Indiana/09/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229484027_A/Canada-NS/RV153 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229892700_A/Canada-NS/RV153 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229892710_A/Canada-NS/RV153 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|237511821_A/Mexico/4115/200 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|237511811_A/Mexico/4482/200 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|237511799_A/Mexico/4486/200 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|237511817_A/Mexico/4603/200 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|237511795_A/Mexico/4604/200 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229783367_A/Korea/01/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229783377_A/New_York/1669/2 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536022_A/Arizona/01/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536003_A/Kansas/02/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536121_A/Michigan/02/200 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229598896_A/Texas/15/2009 TSADQQSLYQNADAYVFVGSSRYSKKLKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229609563_A/Catalonia/P154/ TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 225
gi|229299521_A/Texas/04/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|228860929_A/Netherlands/602 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229484029_A/Mexico/InDRE448 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229535997_A/South_Carolina/ TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229609557_A/Catalonia/P148/ TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 226
gi|229299515_A/Texas/04/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229396467_A/Texas/06/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229535816_A/Texas/09/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229535985_A/Texas/08/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536075_A/Texas/07/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229368677_A/Denmark/513/200 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|227831826_A/Texas/04/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|227831774_A/Texas/05/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|227831776_A/California/06/2 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|227831759_A/California/05/2 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|227977104_A/California/10/2 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536135_A/Colorado/03/200 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|228481046_A/Auckland/1/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 208
gi|237624327_A/swine/Alberta/O TSADQQSLYQNADANVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229536010_A/Kansas/03/2009 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|228495370_A/Regensburg/Germ TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 210
gi|229892706A/Mexico/InDRE4114 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRGQEGRMNYYWTL 250
gi|229535949_A/California/04/2 TSADQQSLYQNADTYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|227809830_A/California/04/2 TSADQQSLYQNADTYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|229299517_A/California/07/2 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|228017758_A/California/08/2 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250
gi|227977172_A/California/07/2 TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRXXEGRMNYYWTL 250
*************: **** ******:*********** **********
gi|229396357_A/New_York/12/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229892708_A/Canada-AB/RV153 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229396399_A/New_York/18/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536064_A/New_York/20/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536055_A/New_York/20/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229396487_A/New_York/19/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|227977099_A/New_York/19/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229396410_A/New_York/31/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229396419_A/New_York/23/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229396381_A/New_York/11/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229396443_A/New_York/10/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229484031_A/Canada-ON/RV152 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229535797_A/New_York/22/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536129_A/New_York/13/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536100_A/Massachusetts/0 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229535909_A/Massachusetts/0 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229535834_A/California/14/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229892704_A/Canada-ON/RV152 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229598877_A/Ohio/07/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229396504_A/Ohio/07/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229396494_A/Ohio/07/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229892702_A/Canada-ON/RV152 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229783398_A/New_York/1682/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCDTTCQTPK 300
gi|237511819_A/Mexico/4108/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536049_A/Arizona/02/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536088_A/Indiana/09/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229484027_A/Canada-NS/RV153 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229892700_A/Canada-NS/RV153 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229892710_A/Canada-NS/RV153 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|237511821_A/Mexico/4115/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|237511811_A/Mexico/4482/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|237511799_A/Mexico/4486/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|237511817_A/Mexico/4603/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|237511795_A/Mexico/4604/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229783367_A/Korea/01/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229783377_A/New_York/1669/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536022_A/Arizona/01/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536003_A/Kansas/02/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536121_A/Michigan/02/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229598896_A/Texas/15/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229609563_A/Catalonia/P154/ VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 275
gi|229299521_A/Texas/04/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|228860929_A/Netherlands/602 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229484029_A/Mexico/InDRE448 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229535997_A/South_Carolina/ VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHECNTTCQTPK 300
gi|229609557_A/Catalonia/P148/ VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHECNTTCQTPK 276
gi|229299515_A/Texas/04/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229396467_A/Texas/06/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229535816_A/Texas/09/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229535985_A/Texas/08/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536075_A/Texas/07/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229368677_A/Denmark/513/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|227831826_A/Texas/04/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|227831774_A/Texas/05/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|227831776_A/California/06/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|227831759_A/California/05/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|227977104_A/California/10/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536135_A/Colorado/03/200 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|228481046_A/Auckland/1/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 258
gi|237624327_A/swine/Alberta/O VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229536010_A/Kansas/03/2009 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|228495370_A/Regensburg/Germ VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 260
gi|229892706A/Mexico/InDRE4114 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229535949_A/California/04/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|227809830_A/California/04/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|229299517_A/California/07/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|228017758_A/California/08/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
gi|227977172_A/California/07/2 VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
****************************************:*:*******
gi|229396357_A/New_York/12/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229892708_A/Canada-AB/RV153 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229396399_A/New_York/18/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536064_A/New_York/20/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536055_A/New_York/20/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229396487_A/New_York/19/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|227977099_A/New_York/19/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229396410_A/New_York/31/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229396419_A/New_York/23/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229396381_A/New_York/11/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229396443_A/New_York/10/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229484031_A/Canada-ON/RV152 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229535797_A/New_York/22/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536129_A/New_York/13/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536100_A/Massachusetts/0 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229535909_A/Massachusetts/0 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229535834_A/California/14/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229892704_A/Canada-ON/RV152 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229598877_A/Ohio/07/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229396504_A/Ohio/07/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229396494_A/Ohio/07/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229892702_A/Canada-ON/RV152 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229783398_A/New_York/1682/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|237511819_A/Mexico/4108/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536049_A/Arizona/02/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536088_A/Indiana/09/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229484027_A/Canada-NS/RV153 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229892700_A/Canada-NS/RV153 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229892710_A/Canada-NS/RV153 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|237511821_A/Mexico/4115/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|237511811_A/Mexico/4482/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|237511799_A/Mexico/4486/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|237511817_A/Mexico/4603/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|237511795_A/Mexico/4604/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229783367_A/Korea/01/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229783377_A/New_York/1669/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536022_A/Arizona/01/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536003_A/Kansas/02/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536121_A/Michigan/02/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229598896_A/Texas/15/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229609563_A/Catalonia/P154/ GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 325
gi|229299521_A/Texas/04/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|228860929_A/Netherlands/602 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229484029_A/Mexico/InDRE448 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229535997_A/South_Carolina/ GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229609557_A/Catalonia/P148/ GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 326
gi|229299515_A/Texas/04/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229396467_A/Texas/06/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229535816_A/Texas/09/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229535985_A/Texas/08/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536075_A/Texas/07/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229368677_A/Denmark/513/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|227831826_A/Texas/04/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|227831774_A/Texas/05/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|227831776_A/California/06/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|227831759_A/California/05/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|227977104_A/California/10/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536135_A/Colorado/03/200 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|228481046_A/Auckland/1/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 308
gi|237624327_A/swine/Alberta/O GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229536010_A/Kansas/03/2009 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|228495370_A/Regensburg/Germ GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 310
gi|229892706A/Mexico/InDRE4114 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350
gi|229535949_A/California/04/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350
gi|227809830_A/California/04/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350
gi|229299517_A/California/07/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350
gi|228017758_A/California/08/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350
gi|227977172_A/California/07/2 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350
*************************************:************
gi|229396357_A/New_York/12/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229892708_A/Canada-AB/RV153 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229396399_A/New_York/18/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536064_A/New_York/20/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536055_A/New_York/20/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229396487_A/New_York/19/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|227977099_A/New_York/19/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229396410_A/New_York/31/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229396419_A/New_York/23/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229396381_A/New_York/11/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229396443_A/New_York/10/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229484031_A/Canada-ON/RV152 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229535797_A/New_York/22/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536129_A/New_York/13/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536100_A/Massachusetts/0 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229535909_A/Massachusetts/0 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229535834_A/California/14/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229892704_A/Canada-ON/RV152 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229598877_A/Ohio/07/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229396504_A/Ohio/07/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229396494_A/Ohio/07/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229892702_A/Canada-ON/RV152 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229783398_A/New_York/1682/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|237511819_A/Mexico/4108/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536049_A/Arizona/02/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536088_A/Indiana/09/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229484027_A/Canada-NS/RV153 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVV 400
gi|229892700_A/Canada-NS/RV153 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVV 400
gi|229892710_A/Canada-NS/RV153 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVV 400
gi|237511821_A/Mexico/4115/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|237511811_A/Mexico/4482/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|237511799_A/Mexico/4486/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|237511817_A/Mexico/4603/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|237511795_A/Mexico/4604/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229783367_A/Korea/01/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229783377_A/New_York/1669/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536022_A/Arizona/01/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536003_A/Kansas/02/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536121_A/Michigan/02/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229598896_A/Texas/15/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229609563_A/Catalonia/P154/ AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 375
gi|229299521_A/Texas/04/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|228860929_A/Netherlands/602 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229484029_A/Mexico/InDRE448 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229535997_A/South_Carolina/ AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229609557_A/Catalonia/P148/ AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 376
gi|229299515_A/Texas/04/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229396467_A/Texas/06/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229535816_A/Texas/09/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229535985_A/Texas/08/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536075_A/Texas/07/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229368677_A/Denmark/513/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|227831826_A/Texas/04/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|227831774_A/Texas/05/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|227831776_A/California/06/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|227831759_A/California/05/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|227977104_A/California/10/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536135_A/Colorado/03/200 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|228481046_A/Auckland/1/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 358
gi|237624327_A/swine/Alberta/O VGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229536010_A/Kansas/03/2009 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|228495370_A/Regensburg/Germ AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 360
gi|229892706A/Mexico/InDRE4114 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229535949_A/California/04/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|227809830_A/California/04/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|229299517_A/California/07/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|228017758_A/California/08/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
gi|227977172_A/California/07/2 AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400
.************************************************:
gi|229396357_A/New_York/12/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229892708_A/Canada-AB/RV153 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229396399_A/New_York/18/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536064_A/New_York/20/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536055_A/New_York/20/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229396487_A/New_York/19/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|227977099_A/New_York/19/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229396410_A/New_York/31/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229396419_A/New_York/23/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229396381_A/New_York/11/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229396443_A/New_York/10/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229484031_A/Canada-ON/RV152 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229535797_A/New_York/22/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536129_A/New_York/13/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536100_A/Massachusetts/0 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229535909_A/Massachusetts/0 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229535834_A/California/14/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229892704_A/Canada-ON/RV152 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229598877_A/Ohio/07/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKIDDGFLDIWTYNAELLVLLENER 450
gi|229396504_A/Ohio/07/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKIDDGFLDIWTYNAELLVLLENER 450
gi|229396494_A/Ohio/07/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKIDDGFLDIWTYNAELLVLLENER 450
gi|229892702_A/Canada-ON/RV152 EKMNTQFTAVGKEFNHLEKRIENLNKKIDDGFLDIWTYNAELLVLLENER 450
gi|229783398_A/New_York/1682/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|237511819_A/Mexico/4108/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLILLENER 450
gi|229536049_A/Arizona/02/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536088_A/Indiana/09/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229484027_A/Canada-NS/RV153 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229892700_A/Canada-NS/RV153 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229892710_A/Canada-NS/RV153 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|237511821_A/Mexico/4115/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|237511811_A/Mexico/4482/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|237511799_A/Mexico/4486/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|237511817_A/Mexico/4603/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|237511795_A/Mexico/4604/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229783367_A/Korea/01/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229783377_A/New_York/1669/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536022_A/Arizona/01/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536003_A/Kansas/02/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536121_A/Michigan/02/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229598896_A/Texas/15/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229609563_A/Catalonia/P154/ EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 425
gi|229299521_A/Texas/04/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|228860929_A/Netherlands/602 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229484029_A/Mexico/InDRE448 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229535997_A/South_Carolina/ EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229609557_A/Catalonia/P148/ EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 426
gi|229299515_A/Texas/04/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229396467_A/Texas/06/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229535816_A/Texas/09/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229535985_A/Texas/08/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536075_A/Texas/07/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229368677_A/Denmark/513/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|227831826_A/Texas/04/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|227831774_A/Texas/05/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|227831776_A/California/06/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|227831759_A/California/05/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|227977104_A/California/10/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536135_A/Colorado/03/200 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|228481046_A/Auckland/1/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 408
gi|237624327_A/swine/Alberta/O EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229536010_A/Kansas/03/2009 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|228495370_A/Regensburg/Germ EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 410
gi|229892706A/Mexico/InDRE4114 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229535949_A/California/04/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|227809830_A/California/04/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|229299517_A/California/07/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|228017758_A/California/08/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
gi|227977172_A/California/07/2 EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450
***************************:***************:******
gi|229396357_A/New_York/12/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229892708_A/Canada-AB/RV153 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229396399_A/New_York/18/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536064_A/New_York/20/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536055_A/New_York/20/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229396487_A/New_York/19/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|227977099_A/New_York/19/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229396410_A/New_York/31/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229396419_A/New_York/23/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229396381_A/New_York/11/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229396443_A/New_York/10/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229484031_A/Canada-ON/RV152 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229535797_A/New_York/22/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536129_A/New_York/13/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536100_A/Massachusetts/0 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229535909_A/Massachusetts/0 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229535834_A/California/14/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229892704_A/Canada-ON/RV152 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229598877_A/Ohio/07/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229396504_A/Ohio/07/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229396494_A/Ohio/07/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229892702_A/Canada-ON/RV152 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229783398_A/New_York/1682/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|237511819_A/Mexico/4108/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536049_A/Arizona/02/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536088_A/Indiana/09/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229484027_A/Canada-NS/RV153 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229892700_A/Canada-NS/RV153 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229892710_A/Canada-NS/RV153 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|237511821_A/Mexico/4115/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|237511811_A/Mexico/4482/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|237511799_A/Mexico/4486/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|237511817_A/Mexico/4603/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|237511795_A/Mexico/4604/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229783367_A/Korea/01/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229783377_A/New_York/1669/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536022_A/Arizona/01/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536003_A/Kansas/02/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536121_A/Michigan/02/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229598896_A/Texas/15/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229609563_A/Catalonia/P154/ TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 475
gi|229299521_A/Texas/04/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|228860929_A/Netherlands/602 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229484029_A/Mexico/InDRE448 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229535997_A/South_Carolina/ TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229609557_A/Catalonia/P148/ TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 476
gi|229299515_A/Texas/04/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229396467_A/Texas/06/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229535816_A/Texas/09/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229535985_A/Texas/08/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536075_A/Texas/07/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229368677_A/Denmark/513/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|227831826_A/Texas/04/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|227831774_A/Texas/05/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|227831776_A/California/06/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|227831759_A/California/05/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|227977104_A/California/10/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536135_A/Colorado/03/200 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|228481046_A/Auckland/1/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 458
gi|237624327_A/swine/Alberta/O TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229536010_A/Kansas/03/2009 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|228495370_A/Regensburg/Germ TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 460
gi|229892706A/Mexico/InDRE4114 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229535949_A/California/04/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|227809830_A/California/04/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|229299517_A/California/07/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|228017758_A/California/08/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
gi|227977172_A/California/07/2 TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500
**************************************************
gi|229396357_A/New_York/12/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229892708_A/Canada-AB/RV153 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229396399_A/New_York/18/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536064_A/New_York/20/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536055_A/New_York/20/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229396487_A/New_York/19/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|227977099_A/New_York/19/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229396410_A/New_York/31/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229396419_A/New_York/23/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229396381_A/New_York/11/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229396443_A/New_York/10/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229484031_A/Canada-ON/RV152 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229535797_A/New_York/22/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536129_A/New_York/13/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536100_A/Massachusetts/0 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229535909_A/Massachusetts/0 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229535834_A/California/14/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229892704_A/Canada-ON/RV152 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229598877_A/Ohio/07/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229396504_A/Ohio/07/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229396494_A/Ohio/07/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229892702_A/Canada-ON/RV152 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229783398_A/New_York/1682/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|237511819_A/Mexico/4108/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536049_A/Arizona/02/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536088_A/Indiana/09/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229484027_A/Canada-NS/RV153 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229892700_A/Canada-NS/RV153 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229892710_A/Canada-NS/RV153 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|237511821_A/Mexico/4115/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|237511811_A/Mexico/4482/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|237511799_A/Mexico/4486/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|237511817_A/Mexico/4603/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|237511795_A/Mexico/4604/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229783367_A/Korea/01/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229783377_A/New_York/1669/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536022_A/Arizona/01/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536003_A/Kansas/02/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536121_A/Michigan/02/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229598896_A/Texas/15/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229609563_A/Catalonia/P154/ YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 525
gi|229299521_A/Texas/04/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|228860929_A/Netherlands/602 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229484029_A/Mexico/InDRE448 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229535997_A/South_Carolina/ YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229609557_A/Catalonia/P148/ YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 526
gi|229299515_A/Texas/04/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229396467_A/Texas/06/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229535816_A/Texas/09/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229535985_A/Texas/08/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536075_A/Texas/07/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229368677_A/Denmark/513/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|227831826_A/Texas/04/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|227831774_A/Texas/05/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|227831776_A/California/06/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|227831759_A/California/05/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|227977104_A/California/10/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536135_A/Colorado/03/200 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|228481046_A/Auckland/1/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 508
gi|237624327_A/swine/Alberta/O YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229536010_A/Kansas/03/2009 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|228495370_A/Regensburg/Germ YDYPKYSEEAKLNREEIDGVK----------------------------- 481
gi|229892706A/Mexico/InDRE4114 YDYPKYSEEAKLNREEIDGVKLESTRFYQILAIYSTVASSLVLVVSLGAI 550
gi|229535949_A/California/04/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|227809830_A/California/04/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|229299517_A/California/07/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|228017758_A/California/08/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
gi|227977172_A/California/07/2 YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550
*********************
gi|229396357_A/New_York/12/200 SFWMCSNGSLQCRICI 566
gi|229892708_A/Canada-AB/RV153 SFWMCSNGSLQCRICI 566
gi|229396399_A/New_York/18/200 SFWMCSNGSLQCRICI 566
gi|229536064_A/New_York/20/200 SFWMCSNGSLQCRICI 566
gi|229536055_A/New_York/20/200 SFWMCSNGSLQCRICI 566
gi|229396487_A/New_York/19/200 SFWMCSNGSLQCRICI 566
gi|227977099_A/New_York/19/200 SFWMCSNGSLQCRICI 566
gi|229396410_A/New_York/31/200 SFWMCSNGSLQCRICI 566
gi|229396419_A/New_York/23/200 SFWMCSNGSLQCRICI 566
gi|229396381_A/New_York/11/200 SFWMCSNGSLQCRICI 566
gi|229396443_A/New_York/10/200 SFWMCSNGSLQCRICI 566
gi|229484031_A/Canada-ON/RV152 SFWMCSNGSLQCRICI 566
gi|229535797_A/New_York/22/200 SFWMCSNGSLQCRICI 566
gi|229536129_A/New_York/13/200 SFWMCSNGSLQCRICI 566
gi|229536100_A/Massachusetts/0 SFWMCSNGSLQCRICI 566
gi|229535909_A/Massachusetts/0 SFWMCSNGSLQCRICI 566
gi|229535834_A/California/14/2 SFWMCSNGSLQCRICI 566
gi|229892704_A/Canada-ON/RV152 SFWMCSNGSLQCRICI 566
gi|229598877_A/Ohio/07/2009 SFWMCSNGSLQCRICI 566
gi|229396504_A/Ohio/07/2009 SFWMCSNGSLQCRICI 566
gi|229396494_A/Ohio/07/2009 SFWMCSNGSLQCRICI 566
gi|229892702_A/Canada-ON/RV152 SFWMCSNGSLQCRICI 566
gi|229783398_A/New_York/1682/2 SFWMCSNGSLQCRICI 566
gi|237511819_A/Mexico/4108/200 SFWMCSNGSLQCRICI 566
gi|229536049_A/Arizona/02/2009 SFWMCSNGSLQCRICI 566
gi|229536088_A/Indiana/09/2009 SFWMCSNGSLQCRICI 566
gi|229484027_A/Canada-NS/RV153 SFWMCSNGSLQCRICI 566
gi|229892700_A/Canada-NS/RV153 SFWMCSNGSLQCRICI 566
gi|229892710_A/Canada-NS/RV153 SFWMCSNGSLQCRICI 566
gi|237511821_A/Mexico/4115/200 SFWMCSNGSLQCRICI 566
gi|237511811_A/Mexico/4482/200 SFWMCSNGSLQCRICI 566
gi|237511799_A/Mexico/4486/200 SFWMCSNGSLQCRICI 566
gi|237511817_A/Mexico/4603/200 SFWMCSNGSLQCRICI 566
gi|237511795_A/Mexico/4604/200 SFWMCSNGSLQCRICI 566
gi|229783367_A/Korea/01/2009 SFWMCSNGSLQCRICI 566
gi|229783377_A/New_York/1669/2 SFWMCSNGSLQCRICI 566
gi|229536022_A/Arizona/01/2009 SFWMCSNGSLQCRICI 566
gi|229536003_A/Kansas/02/2009 SFWMCSNGSLQCRICI 566
gi|229536121_A/Michigan/02/200 SFWMCSNGSLQCRICI 566
gi|229598896_A/Texas/15/2009 SFWMCSNGSLQCRICI 566
gi|229609563_A/Catalonia/P154/ SFWMCSNG-------- 533
gi|229299521_A/Texas/04/2009 SFWMCSNGSLQCRICI 566
gi|228860929_A/Netherlands/602 SFWMCSNGSLQCRICI 566
gi|229484029_A/Mexico/InDRE448 SFWMCSNGSLQCRICI 566
gi|229535997_A/South_Carolina/ SFWMCSNGSLQCRICI 566
gi|229609557_A/Catalonia/P148/ SFWMCSNG-------- 534
gi|229299515_A/Texas/04/2009 SFWMCSNGSLQCRICI 566
gi|229396467_A/Texas/06/2009 SFWMCSNGSLQCRICI 566
gi|229535816_A/Texas/09/2009 SFWMCSNGSLQCRICI 566
gi|229535985_A/Texas/08/2009 SFWMCSNGSLQCRICI 566
gi|229536075_A/Texas/07/2009 SFWMCSNGSLQCRICI 566
gi|229368677_A/Denmark/513/200 SFWMCSNGSLQCRICI 566
gi|227831826_A/Texas/04/2009 SFWMCSNGSLQCRICI 566
gi|227831774_A/Texas/05/2009 SFWMCSNGSLQCRICI 566
gi|227831776_A/California/06/2 SFWMCSNGSLQCRICI 566
gi|227831759_A/California/05/2 SFWMCSNGSLQCRICI 566
gi|227977104_A/California/10/2 SFWMCSNGSLQCRICI 566
gi|229536135_A/Colorado/03/200 SFWMCSNGSLQCRICI 566
gi|228481046_A/Auckland/1/2009 SFWMCSNGSLQCRICI 524
gi|237624327_A/swine/Alberta/O SFWMCSNGSLQCRICI 566
gi|229536010_A/Kansas/03/2009 SFWMCSNGSLQCRICI 566
gi|228495370_A/Regensburg/Germ ----------------
gi|229892706A/Mexico/InDRE4114 SFWMCSNGSLQCRICI 566
gi|229535949_A/California/04/2 SFWMCSNGSLQCRICI 566
gi|227809830_A/California/04/2 SFWMCSNGSLQCRICI 566
gi|229299517_A/California/07/2 SFWMCSNGSLQCRICI 566
gi|228017758_A/California/08/2 SFWMCSNGSLQCRICI 566
gi|227977172_A/California/07/2 SFWMCSNGSLQCRICI 566
BLASTBLAST
>gb|ABQ42446.1| hemagglutinin [Influenza A virus (A/swine/Guangxi/17/2005(H1N2))]
Length=566
Score = 1145 bits (2962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/566 (95%), Positives = 558/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFIDYEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFIDYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHDSN+GVTAACPHAGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDSNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLW IHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKGKEVLVLWSIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAIKRNSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGA+SFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAVSFWMCSNGSLQCRICI 566
>gb|AAL87865.1|AF455675_1 hemagglutinin [Influenza A virus (A/Swine/Ohio/891/01(H1N2))]
Length=566
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/566 (95%), Positives = 559/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAGAKSFY+NLIWLVKKGNSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGAKSFYRNLIWLVKKGNSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|AAF75994.1|AF250124_1 hemagglutinin [influenza A virus (A/Swine/Indiana/9K035/99 (H1N2))]
Length=566
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/566 (95%), Positives = 558/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAGA SFY+NLIWLVKKGNSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL87870.1|AF455680_1 hemagglutinin [Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2))]
Length=566
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/566 (95%), Positives = 557/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETSSSDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSSSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP+AGAKSFY+NLIWLVKK NSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPYAGAKSFYRNLIWLVKKENSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GR+NYYWTLVEPGDKITFEATGNLVVPRYAFAMERN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 AGRINYYWTLVEPGDKITFEATGNLVVPRYAFAMERNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQF AVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFIAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELL+LLENERTLDYHDSNVKNLYEKVRSQLKNNA+EIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLILLENERTLDYHDSNVKNLYEKVRSQLKNNAREIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+ CMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDKCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ABV25639.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/1192/2001(H1N2))]
Length=566
Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/566 (95%), Positives = 556/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTTSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+++GVTAACPHAGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDADRGVTAACPHAGASSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWT+VEPGDKITFEATGNLVVPRYAFAM+RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 AGRMNYYWTIVEPGDKITFEATGNLVVPRYAFAMKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHPITIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPITIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDY KYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYSKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL29710.1| hemagglutinin [Influenza A virus (A/SW/MN/23124-T/01(H1N2))]
gb|AAL29711.1| hemagglutinin [Influenza A virus (A/SW/MN/23124-S/01(H1N2))]
Length=566
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/566 (95%), Positives = 557/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAGA SFY+NLIWLVKKGNSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNH E+R
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHPERR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ABQ42444.1| hemagglutinin [Influenza A virus (A/swine/Guangxi/13/2006(H1N2))]
Length=566
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/566 (95%), Positives = 557/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTASADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFIDYEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFIDYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWP+HDSN+GVTAACPHAGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPDHDSNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHP TSA+QQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKGKEVLVLWGIHHPPTSANQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFAM+RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LE+R
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLERR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL+REEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLHREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQC+ICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCKICI 566
>gb|ABV25641.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/00194/2003(H1N2))]
Length=566
Score = 1131 bits (2926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/566 (94%), Positives = 556/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNG CYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGACYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAG SFY+NLIWLVKKGNSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGTNSFYRNLIWLVKKGNSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYS+KF+PEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSRKFEPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNT CQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTACQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKN+YEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNIYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL29713.1| hemagglutinin [Influenza A virus (A/SW/MN/16419/01(H1N2))]
Length=566
Score = 1130 bits (2924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/566 (94%), Positives = 555/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE +HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEGRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAG SFY+NLIWLVKKGNSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGTNSFYRNLIWLVKKGNSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNT CQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTICQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRIC+
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICM 566
>gb|AAL87871.1|AF455681_1 hemagglutinin [Influenza A virus (A/Swine/Illinois/100085A/01
(H1N2))]
Length=566
Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/566 (94%), Positives = 556/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLH+GKCNIAGW+LGNPECESL TASSWSYIVETS+S+NGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHMGKCNIAGWLLGNPECESLFTASSWSYIVETSNSENGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAGA SFY+NLIWLVKKG+SYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGANSFYRNLIWLVKKGDSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGS RYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSLRYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT V+DCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVYDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQF AVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFKAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ACH69547.1| hemagglutinin [Influenza A virus (A/swine/OH/511445/2007(H1N1))]
Length=566
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/566 (93%), Positives = 556/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE++HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESLSTASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLSTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAG SFY+NLIWLVKKGNSYPK++K
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGTNSFYRNLIWLVKKGNSYPKINK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLW IHHPSTSADQQSLYQNADAYVFVGSSRYS+KF+PEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWAIHHPSTSADQQSLYQNADAYVFVGSSRYSRKFEPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDC+TTCQTP
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCDTTCQTPN 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEF+HLE+R
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLERR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|AAK71687.1| hemagglutinin [Influenza A virus (A/Turkey/MO/24093/99(H1N2))]
Length=566
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/566 (94%), Positives = 552/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFP+TSSWPNHD+N+GVTAACPHAGA SFY+NLIWL KKG+SYPKLSK
Sbjct 121 QLSSVSSFERFEIFPETSSWPNHDTNRGVTAACPHAGANSFYRNLIWLAKKGDSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHP TSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVR Q
Sbjct 181 SYINNKGKEVLVLWGIHHPPTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFAM+RN+ SGIIISD VHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMKRNSESGIIISDISVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFT VGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTVVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLG ISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGTISFWMCSNGSLQCRICI 566
>gb|AAL87872.1|AF455682_1 hemagglutinin [Influenza A virus (A/Swine/Illinois/100084/01
(H1N2))]
Length=566
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/566 (94%), Positives = 553/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLH+GKCNIAGW+LGNPECESL TASSWSYIVETS+S+NGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHMGKCNIAGWLLGNPECESLFTASSWSYIVETSNSENGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSV SFERFEIFPKTSSWPNHD+N+GVTAACPHAGA SFY+NLIWLVKKGNSYPK+SK
Sbjct 121 QLSSVLSFERFEIFPKTSSWPNHDTNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTSADQQSLYQN DAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSADQQSLYQNEDAYVFVGSSRYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT HDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSAHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+A GLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMARGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQF AVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFKAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ABV25642.1| hemagglutinin [Influenza A virus (A/swine/Kansas/00246/2004(H1N2))]
Length=566
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/566 (93%), Positives = 555/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDT+LEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTILEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TA SWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTARSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFP TSSWPNHD+N+GVTAACPHAG KSFY+NLIWLVKKG+SYPK+SK
Sbjct 121 QLSSVSSFERFEIFPNTSSWPNHDTNRGVTAACPHAGTKSFYRNLIWLVKKGDSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSS+YSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSKYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRM+YYWT+VEPGDKITFEATGNLVVPRYAF ++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 EGRMDYYWTIVEPGDKITFEATGNLVVPRYAFELKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKV+SQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVKSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+ CMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDMCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLIVSLGAISFWMCSNGSLQCRICI 566
>gb|ACE77934.1| hemagglutinin [Influenza A virus (A/swine/Korea/PZ4/2006(H1N2))]
Length=566
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/566 (93%), Positives = 555/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLITASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNH++++GVTAACPHAG SFYKNLIWLVKK NSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHNTDRGVTAACPHAGTSSFYKNLIWLVKKENSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVRDQ
Sbjct 181 SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ACE77935.1| hemagglutinin [Influenza A virus (A/swine/Korea/PZ7/2006(H1N2))]
gb|ACE77936.1| hemagglutinin [Influenza A virus (A/swine/Korea/PZ14/2006(H1N2))]
Length=566
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/566 (93%), Positives = 555/566 (98%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLITASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFP+TSSWPNH++++GVTAACPHAG SFYKNLIWLVKK NSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPRTSSWPNHNTDRGVTAACPHAGTSSFYKNLIWLVKKENSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVRDQ
Sbjct 181 SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL87867.1|AF455677_1 hemagglutinin [Influenza A virus (A/Swine/North Carolina/93523/01
(H1N2))]
Length=565
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/566 (94%), Positives = 553/566 (97%), Gaps = 1/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TA ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTAKADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTS WPNHD+N+GVTAACPHAGA SFY+NLIWLV+K NSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTS-WPNHDTNRGVTAACPHAGANSFYRNLIWLVEKENSYPKLSK 179
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K EVLVLWGIHHPSTSADQ+SLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ
Sbjct 180 SYINNKEMEVLVLWGIHHPSTSADQRSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 239
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGDKITFEATGNLVVPRYAFAM+R +GSGIIISDT VHDCNTTCQTPK
Sbjct 240 AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMKRGSGSGIIISDTSVHDCNTTCQTPK 299
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 300 GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 359
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 360 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 419
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 420 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 479
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 480 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 539
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 540 LVLVVSLGAISFWMCSNGSLQCRICI 565
>gb|ABW71521.1| hemagglutinin [Influenza A virus (A/swine/Iowa/24297/1991(H1N1))]
Length=566
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/566 (93%), Positives = 552/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYINNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACE77937.1| hemagglutinin [Influenza A virus (A/swine/Korea/CY08/2007(H1N2))]
Length=566
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/566 (93%), Positives = 554/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLITASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFP+TSSWPNH++++GVTAACPHAG SFYKNLIWLVKK NSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPRTSSWPNHNTDRGVTAACPHAGTSSFYKNLIWLVKKENSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVR Q
Sbjct 181 SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ABG34254.1| hemagglutinin [Influenza A virus (A/swine/Korea/S11/2005(H1N2))]
Length=566
Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/566 (93%), Positives = 552/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTFATAN+DTLCIGYHANNSTDTVDT+LE+N+TVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFATANSDTLCIGYHANNSTDTVDTILERNITVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNP CESL TASSWSYIVE S+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPGCESLFTASSWSYIVEKSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTA+CPHAG KSFY+NLIWLVKK NSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTASCPHAGTKSFYRNLIWLVKKENSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ
Sbjct 181 SYINSKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRMNYYWT+VEPGDKITFEATGNLVVPRYA A++RN+GSGIIISDT VHD NT CQTPK
Sbjct 241 EGRMNYYWTIVEPGDKITFEATGNLVVPRYALALKRNSGSGIIISDTSVHDGNTACQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREE+DGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEVDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGA SFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGATSFWMCSNGSLQCRICI 566
>gb|ACE77931.1| hemagglutinin [Influenza A virus (A/swine/Korea/JL02/2005(H1N2))]
Length=566
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/566 (93%), Positives = 553/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLITASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFP+TSSWPNH++++GVTAACPHAG SFYKNLIWLVKK NSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPRTSSWPNHNTDRGVTAACPHAGTSSFYKNLIWLVKKENSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPS SADQ +LYQNADAYVFVGSSRYSKKF PEIA RPKVR Q
Sbjct 181 SYINNKGKEVLVLWGIHHPSNSADQLTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR29565.1| hemagglutinin [Influenza A virus (A/swine/Maryland/23239/1991(H1N1))]
gb|ACI26604.1| hemagglutinin [Influenza A virus (A/swine/Memphis/1/1990(H1N1))]
Length=566
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/566 (93%), Positives = 551/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACF25596.1| hemagglutinin [Influenza A virus (A/turkey/IA/21089-3/1992(H1N1))]
Length=566
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/566 (93%), Positives = 551/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR29585.1| hemagglutinin [Influenza A virus (A/swine/Wisconsin/1915/1988(H1N1))]
Length=566
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/566 (92%), Positives = 551/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQG+GYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGTGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACE77929.1| hemagglutinin [Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2))]
Length=566
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/566 (93%), Positives = 551/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVETS+ DNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLIAASSWSYIVETSNPDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP AG SFYKNLIWLVKK NSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPLAGTNSFYKNLIWLVKKENSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVRDQ
Sbjct 181 SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+ IG+CPKYVKSTKL++ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVXIGECPKYVKSTKLKMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR29595.1| hemagglutinin [Influenza A virus (A/swine/Iowa/17672/1988(H1N1))]
gb|ACD88703.1| hemagglutinin [Influenza A virus (A/turkey/NC/19762/1988(H1N1))]
Length=566
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABU80400.1| hemagglutinin [Influenza A virus (A/Ohio/3559/1988(H1N1))]
Length=566
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLN+KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNRKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACE77933.1| hemagglutinin [Influenza A virus (A/swine/Korea/Asan04/2006(H1N2))]
Length=566
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/566 (92%), Positives = 551/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVETS+ DNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLIAASSWSYIVETSNPDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP AG SFYKNLIWL+KK NSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPLAGTNSFYKNLIWLIKKENSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVR Q
Sbjct 181 SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKL++ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLKMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ACE77932.1| hemagglutinin [Influenza A virus (A/swine/Korea/JL04/2005(H1N2))]
Length=566
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/566 (93%), Positives = 551/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVETS+ DNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLIAASSWSYIVETSNPDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP AG SFYKNLIWLVKK NSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPLAGTNSFYKNLIWLVKKENSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFV SSRYSKKF PEIA RPKVRDQ
Sbjct 181 SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVESSRYSKKFTPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKL++ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLKMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|ACE77930.1| hemagglutinin [Influenza A virus (A/swine/Korea/JL01/2005(H1N2))]
Length=566
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/566 (93%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVETS+ DNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLIAASSWSYIVETSNPDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP AG SFYKNLIWLVKK NSYPK+SK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPLAGTNSFYKNLIWLVKKENSYPKISK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPS SADQ +LYQNADAYVFVGSSRYSKKF PEI RPKVRDQ
Sbjct 181 SYINNKGKEVLVLWGIHHPSNSADQLTLYQNADAYVFVGSSRYSKKFTPEITTRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK
Sbjct 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKL++ATGLRNVPSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLKMATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
>gb|AAA43283.1| hemagglutinin [Influenza A virus (A/MD/12/1991(H1N1))]
Length=566
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWP+H++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPDHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAB03291.1| hemagglutinin [Influenza A virus (A/WI/4754/1994(H1N1))]
gb|AAB03292.1| hemagglutinin [Influenza A virus (A/WI/4755/1994(H1N1))]
Length=566
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLSVSLGAISFWMCSNGSLQCRICI 566
>gb|ABY84684.1| hemagglutinin [Influenza A virus (A/swine/California/T9001707/1991(H1N1))]
Length=566
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/566 (93%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYT TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTVTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAF87280.1|AF222032_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/235/97(H1N1))]
gb|AAF87281.1|AF222033_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/238/97(H1N1))]
Length=566
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L+G+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LKGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVT+ACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTSACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGK+VLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKF PEIA RPKVR Q
Sbjct 181 SYINNKGKKVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFMPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAMER GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMERGYGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKV+SQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVKSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYST+ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTIASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR29575.1| hemagglutinin [Influenza A virus (A/swine/Kansas/3228/1987(H1N1))]
gb|ABU80420.1| hemagglutinin [Influenza A virus (A/swine/Kansas/3024/1987(H1N1))]
Length=566
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACN50264.1| hemagglutinin [Influenza A virus (A/swine/Shanghai/3/2005(H1N1))]
Length=566
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILV LLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVFLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFE+FPK+SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK
Sbjct 121 QLSSVSSFERFEMFPKSSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHP TSADQQSLYQNADAYVFVGSS+Y+KKF+PEIA RPKVR Q
Sbjct 181 SYINNKEKEVLVLWGIHHPPTSADQQSLYQNADAYVFVGSSKYNKKFRPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKST LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTNLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESV+NGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVRNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACI41022.1| hemagglutinin [Influenza A virus (A/turkey/NC/17026/1988(H1N1))]
Length=566
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAY56898.1| hemagglutinin [Influenza A virus (A/swine/Guangdong/2/01(H1N1))]
gb|ACA25338.1| hemagglutinin [Influenza A virus (A/swine/Shanghai/2/2005(H1N1))]
Length=566
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILV LLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVFLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFE+FPK+SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK
Sbjct 121 QLSSVSSFERFEMFPKSSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHP TSADQQSLYQNADAYVFVGSS+Y+KKF+PEIA RPKVR Q
Sbjct 181 SYINNKEKEVLVLWGIHHPPTSADQQSLYQNADAYVFVGSSKYNKKFRPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 TGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKST LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTNLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESV+NGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVRNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAF87276.1|AF222028_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/163/97(H1N1))]
gb|AAF87279.1|AF222031_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/168/97(H1N1))]
gb|AAF87282.1|AF222034_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/457/98(H1N1))]
Length=566
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIASRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID +TNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGVTNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
L+L+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LILLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAA19934.1| hemagglutinin [Influenza A virus (A/swine/St-Hyacinthe/106/1991(H1))]
Length=566
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/566 (91%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECESLST SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECESLSTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+G TAACP+AGA SFY+NLIWLVKKGNSYPKL+K
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGTTAACPYAGANSFYRNLIWLVKKGNSYPKLNK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHPSTS +QQSLYQNAD YVFVGSS+Y+KKFKPEIA RPKVRDQ
Sbjct 181 SYVNNKGKEVLVLWGIHHPSTSNEQQSLYQNADTYVFVGSSKYNKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYH+CDN CMESVKNGTYDYPKYSEE++LNREEIDG+KL+STRIYQILAIYSTVASS
Sbjct 481 CFEFYHRCDNACMESVKNGTYDYPKYSEESRLNREEIDGIKLDSTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>sp|P26140.1|HEMA_I88A6 RecName: Full=Hemagglutinin; Contains: RecName: Full=Hemagglutinin
HA1 chain; Contains: RecName: Full=Hemagglutinin HA2 chain;
Flags: Precursor
pir||HMIV17 hemagglutinin precursor - influenza A virus (strain A/Swine/
Indiana/1726/88 [H1N1])
gb|ABF71860.1| haemagglutinin [Influenza A virus (A/Swine/Indiana/1726/1988(H1N1))]
Length=566
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/566 (92%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYP YSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPNYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLSVSLGAISFWMCSNGSLQCRICI 566
>gb|ABS50121.1| hemagglutinin [Influenza A virus (A/swine/Iowa/31483/1988(H1N1))]
Length=566
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNA+D ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAVDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLN+KVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNRKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR29605.1| hemagglutinin [Influenza A virus (A/swine/Iowa/3/1985(H1N1))]
gb|ABR29615.1| hemagglutinin [Influenza A virus (A/swine/Iowa/1/1985(H1N1))]
gb|ABW86596.1| hemagglutinin [Influenza A virus (A/swine/Iowa/2/1985(H1N1))]
Length=566
Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABS50111.1| hemagglutinin [Influenza A virus (A/swine/Iowa/1/1987(H1N1))]
Length=566
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTP+
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPE 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST+ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTIASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABK57092.1| hemagglutinin [Influenza A virus (A/Philippines/344/2004(H1N2))]
Length=566
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKA LVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKATLVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TA SWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLLTARSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWL KKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLTKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVG+S+Y+KKF PEIA RPKVRDQ
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGTSKYNKKFNPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISD PVHDCNTTCQTP+
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDAPVHDCNTTCQTPR 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLN+KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNRKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYP+YSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPRYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAF87278.1|AF222030_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/166/97(H1N1))]
Length=566
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIASRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID +TNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGVTNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENER LDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERALDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
L+L+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LILLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL87869.1|AF455679_1 hemagglutinin [Influenza A virus (A/Swine/Iowa/930/01(H1N2))]
Length=566
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKAILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSVSSFERFEIFPK +SWPNHD+NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 HLSSVSSFERFEIFPKANSWPNHDTNKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ
Sbjct 181 SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAERPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVN VIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNPVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAF87277.1|AF222029_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/164/97(H1N1))]
Length=566
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWP+H++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPDHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIASRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID +TNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGVTNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
L+L+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LILLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAN46827.1| hemagglutinin [Influenza A virus (A/Swine/Korea/CY02/02(H1N2))]
Length=566
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/566 (92%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKAILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSVSSFERFEIFPK +SWPNHD+NKGVTAACPHAGA SFY+NLIWLVKK NSYPKLSK
Sbjct 121 HLSSVSSFERFEIFPKVNSWPNHDTNKGVTAACPHAGANSFYRNLIWLVKKENSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YS++FKPEIA RPKVRDQ
Sbjct 181 SYINNKKKEVLVIWGIHHPPTSTDQQALYQNADAYVFVGSSKYSRRFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQS+GLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSKGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSV+EKMNTQFTAVGKEFN LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVVEKMNTQFTAVGKEFNQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IEGLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABB86946.1| hemagglutinin [Influenza A virus (A/swine/Ontario/11112/04(H1N1))]
Length=566
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/566 (91%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECESLST SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECESLSTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+G TAACP+AGA SFY+NLIWLVKKGNSYPKL+K
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGTTAACPYAGANSFYRNLIWLVKKGNSYPKLNK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHPSTS +QQSLYQNAD YVFVGSS+Y+KKFKPEIA RPKVRDQ
Sbjct 181 SYVNNKGKEVLVLWGIHHPSTSNEQQSLYQNADTYVFVGSSKYNKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+ CMESVKNGTYDYPKYSEE++LNREEIDG+KL+STRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDACMESVKNGTYDYPKYSEESRLNREEIDGIKLDSTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
VL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 SVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABV25638.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/37866/1999(H1N1))]
Length=566
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLY F TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKAILVVLLYAFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEEKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGWILGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWILGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPN+++++GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNYETSRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPSTS DQQSLYQNADAYVFVGSS+YSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKEKEVLVLWGIHHPSTSTDQQSLYQNADAYVFVGSSKYSKKFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDT VHDCNT CQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTSVHDCNTNCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKS KLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSKKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQ+AID ITNKVNS+IEKMN+QFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQSAIDGITNKVNSIIEKMNSQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLN+KVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNRKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLEST +YQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTEVYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABV25640.1| hemagglutinin [Influenza A virus (A/swine/North Carolina/36883/2002(H1N1))]
Length=566
Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/566 (92%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MK ILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKTILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSVSSFERFEIFPK +SWPNHD++KGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 HLSSVSSFERFEIFPKANSWPNHDTDKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ
Sbjct 181 SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKEFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDKPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL29712.1| hemagglutinin [Influenza A virus (A/SW/MO/1877/01(H1N2))]
Length=566
Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKAILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSVSSFERFEIFPK +SWPNHD+NKGVTAACP+AGA SFY+NLIWLVKKG+SYPKLSK
Sbjct 121 HLSSVSSFERFEIFPKANSWPNHDTNKGVTAACPYAGASSFYRNLIWLVKKGDSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ
Sbjct 181 SYINNKKKEVLVIWGIHHPPTSNDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNS+IEKMNTQFTAVGKEFN LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFNQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE+LN KVDDGFLDIWTYNAELLVLLENE+TLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IESLNNKVDDGFLDIWTYNAELLVLLENEKTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAR90881.2| hemagglutinin [Influenza A virus (A/swine/Pingtung/92-2/2003(H1N2))]
Length=566
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/566 (90%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF ANADTLCIGYHANNSTDTVDT+LEKN+TVTHSVNLLEDKHNGKLCK
Sbjct 1 MKAILVVLLYTFTAANADTLCIGYHANNSTDTVDTLLEKNITVTHSVNLLEDKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECE L TA SWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGMAPLHLGKCNIAGWLLGNPECEPLFTAKSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++NKGVTAACPHAGA SFY+NLIWLVKKGNSYPKL+K
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNKGVTAACPHAGANSFYRNLIWLVKKGNSYPKLNK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHPSTS DQQSLYQNADAYVFVGSS+Y+KK KPEIA RPKVRDQ
Sbjct 181 SYVNNKGKEVLVLWGIHHPSTSNDQQSLYQNADAYVFVGSSKYNKKLKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GR+NYYWTLVEPGD ITFEATGNL+VPRYAFAM R++GSGIIISD PVHDCN TCQTPK
Sbjct 241 AGRINYYWTLVEPGDTITFEATGNLIVPRYAFAMNRDSGSGIIISDAPVHDCNATCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTS PFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSHPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSG+AAD KSTQNAID ITNK+NSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGFAADRKSTQNAIDGITNKINSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
+ENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 VENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCDNTCMESVKNGTYDYP+YSEE+KLNREEI+GVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDNTCMESVKNGTYDYPRYSEESKLNREEIEGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACA25337.1| hemagglutinin [Influenza A virus (A/swine/Shanghai/1/2005(H1N1))]
Length=566
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/566 (92%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTFA A ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYTFAAAKADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFE+FPK+SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK
Sbjct 121 QLSSVSSFERFEMFPKSSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHP TSADQQSLYQNADAYVFVGSS+Y+KKF+PEIA RPKVR Q
Sbjct 181 SYINNKEKEVLVLWGIHHPPTSADQQSLYQNADAYVFVGSSKYNKKFRPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 TGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKST LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTNLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESV+NGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVRNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGA+SFWMCSNGSLQCRI I
Sbjct 541 LVLLVSLGAVSFWMCSNGSLQCRIYI 566
>gb|AAF87275.1|AF222027_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/136/97(H1N1))]
Length=566
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE++HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L+GVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LKGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK +SWPNH++N+GVT+ACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKANSWPNHETNRGVTSACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKF PEIA RPKVR Q
Sbjct 181 SYINNKGKEVLVLWGIHHPPTSNDQQSLYQNADAYVFVGSSKYNKKFMPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLV PRYAFAMER +GSGIIISDTPVHDCN TCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVAPRYAFAMERGSGSGIIISDTPVHDCNATCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINT+LPFQNIHP+TIG+CPKYVKST+LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTNLPFQNIHPVTIGECPKYVKSTRLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMES+KNGTYDYPKYSEEAKL REEIDGVKLESTRIYQILAIYST+ASS
Sbjct 481 CFEFYHKCDDTCMESIKNGTYDYPKYSEEAKLTREEIDGVKLESTRIYQILAIYSTIASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABX58646.1| hemagglutinin [Influenza A virus (A/swine/Iowa/2/1987(H1N1))]
Length=566
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/566 (91%), Positives = 547/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKL+STRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLDSTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAF87283.1|AF222035_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/458/98(H1N1))]
Length=566
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/566 (91%), Positives = 547/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLY F TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYAFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L+GVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LKGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVT+ACP++GA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTSACPYSGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKF PEIA RPKVR Q
Sbjct 181 SYINNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFMPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLV PRYAFAMER +GSGIIISDTPV+DCNT CQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVAPRYAFAMERGSGSGIIISDTPVYDCNTACQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYA D KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAPDRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFL++WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLNVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEA+LNREEIDGVKLESTRIYQILAIYST+ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEARLNREEIDGVKLESTRIYQILAIYSTIASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACE77928.1| hemagglutinin [Influenza A virus (A/swine/Korea/CAS08/2005(H1N1))]
Length=566
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTFATA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKAILVVLLYTFATADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSVSSFERFEIFPK +SWPNHD++KGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 HLSSVSSFERFEIFPKANSWPNHDTDKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ
Sbjct 181 SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAF M+R +GSGII+SD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFPMKRGSGSGIIVSDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+ LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL29715.1| hemagglutinin [Influenza A virus (A/SW/MN/17138/01(H1N2))]
Length=566
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/566 (91%), Positives = 547/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+V LYTF ANADTLCIGYHANNST+TVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVSLYTFTAANADTLCIGYHANNSTETVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYP LSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPTLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP T+ DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTNTDQQSLYQNADAYVFVGSSKYNKKFKPEIAPRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTP+HDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPIHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAADLKSTQNAID IT KVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITTKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMES+KNG YDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESIKNGIYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL29709.1| hemagglutinin [Influenza A virus (A/SW/CO/17871/01(H1N2))]
Length=566
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/566 (91%), Positives = 547/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSVSSFERFEIFPK +SWPNH++NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 HLSSVSSFERFEIFPKANSWPNHETNKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ
Sbjct 181 SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLV PRYAFAM+R +GSGI+ISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVAPRYAFAMKRGSGSGIVISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQ+AID ITNKVNSVIEKMNTQFTAVGKEFN LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQSAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABV25643.1| hemagglutinin [Influenza A virus (A/swine/Iowa/00239/2004(H1N1))]
Length=566
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAI+VVLLYTFATA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KH+GKLCK
Sbjct 1 MKAIIVVLLYTFATADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHDGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSVSSFERFEIFPK +SWPNHD+NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 HLSSVSSFERFEIFPKANSWPNHDTNKGVTAACPYAGASSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ
Sbjct 181 SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRM+YYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGII+SD PVHDCNTTCQTPK
Sbjct 241 AGRMDYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIVSDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+ LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLES RIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESARIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGA+SFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAVSFWMCSNGSLQCRICI 566
>gb|ABD85123.1| hemagglutinin [Influenza A virus (A/swine/Taiwan/CO935/2004(H1N2))]
gb|ABD85261.1| hemagglutinin [Influenza A virus (A/swine/Taiwan/CO935/2004(H1N2))]
Length=566
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDT+LEKNVTVTHSVNLLEDKHNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTLLEKNVTVTHSVNLLEDKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECE L TA SWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECEPLFTAKSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKL+K
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLNK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHPSTS DQQSLYQNADAYVFVGSS+Y+K+FKPEIA RPKVRDQ
Sbjct 181 SYVNNKGKEVLVLWGIHHPSTSNDQQSLYQNADAYVFVGSSKYNKRFKPEIATRPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNL+VPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLIVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTS PFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSHPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSG+AAD KSTQNAID ITNK+NSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGFAADRKSTQNAIDGITNKINSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
+ENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 VENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCDNTCMESVKNGTYDYP+YSEE+KLNREEI+GVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDNTCMESVKNGTYDYPRYSEESKLNREEIEGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVLVVSLGAISFWMCSNGSL RICI
Sbjct 541 LVLVVSLGAISFWMCSNGSLHGRICI 566
>gb|AAO65612.1| hemagglutinin [Influenza A virus (A/duck/NC/91347/01(H1N2))]
Length=566
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/566 (92%), Positives = 546/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MK ILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKTILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSV SFERFEIFPK +SWPNHD++KGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 HLSSVLSFERFEIFPKANSWPNHDTDKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKKFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDKPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAF87274.1|AF222026_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/125/97(H1N1))]
Length=566
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE++HNGKLCK
Sbjct 1 MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L+GVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LKGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK +SWPNH++N+GVT+ACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKANSWPNHETNRGVTSACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKF PEIA RPKVR Q
Sbjct 181 SYINNKGKEVLVLWGIHHPPTSNDQQSLYQNADAYVFVGSSKYNKKFMPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLV PRYAFAMER +GSGIIISDTPVHDCN TCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVAPRYAFAMERGSGSGIIISDTPVHDCNATCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINT+LPFQNIHP+TIG+CPKYVKST+LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTNLPFQNIHPVTIGECPKYVKSTRLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
I+NLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IKNLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMES+KNGTYDYPKYSEEAKL REEIDGVKLESTRIYQILAIYST+ASS
Sbjct 481 CFEFYHKCDDTCMESIKNGTYDYPKYSEEAKLTREEIDGVKLESTRIYQILAIYSTIASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACI26329.1| hemagglutinin [Influenza A virus (A/X-53A(Puerto Rico/8/1934-New
Jersey/11/1976)(H1N1))]
Length=566
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/566 (91%), Positives = 546/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLLTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNT CQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTKCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD +STQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQRSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR28636.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/5892-7/1979(H1N1))]
Length=566
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACPHAGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQ+SLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQESLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDVPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLEST+IYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTKIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR28713.1| hemagglutinin [Influenza A virus (A/swine/Wisconsin/11/1980(H1N1))]
Length=566
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPIHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYH+CD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHRCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABQ42448.1| hemagglutinin [Influenza A virus (A/swine/Hainan/1/2005(H1N2))]
Length=566
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLY F NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYAFTRGNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+KGKEVLVLWGIHHPST+ DQQSLYQNAD YVFV +S+YSKKFKPEIA RPKVRDQ
Sbjct 181 SYINNKGKEVLVLWGIHHPSTNTDQQSLYQNADTYVFVVTSKYSKKFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVH+C+TTCQTPK
Sbjct 241 AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHNCSTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNV+NLYEKVR+QLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVRNLYEKVRNQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CF+FYHKCD+TCMESVKNGTYDYPKY+EEAKLNR+EIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFKFYHKCDDTCMESVKNGTYDYPKYTEEAKLNRKEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL29714.1| hemagglutinin [Influenza A virus (A/SW/MN/34893/01(H1N2))]
Length=566
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/566 (91%), Positives = 544/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
M+AILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MEAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+ PLHLGKCNIAGW+LGNPEC SL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIDPLHLGKCNIAGWLLGNPECGSLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY N+ KEVLVLWGIHHPSTS DQQSLYQN DAYVFVGSS YSKKFKPEIA RPKVRDQ
Sbjct 181 SYTNNMEKEVLVLWGIHHPSTSTDQQSLYQNTDAYVFVGSSTYSKKFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISD +HDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDASIHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIGKCPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGKCPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
MVDGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVN VIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MVDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNPVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEF HKCD+TCMESV+NGTYDYPKYSEEAKL+RE+IDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFCHKCDDTCMESVRNGTYDYPKYSEEAKLSREKIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
++L+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 MILLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR28658.1| hemagglutinin [Influenza A virus (A/swine/Ontario/4/1981(H1N1))]
gb|ABW36355.1| hemagglutinin [Influenza A virus (A/swine/Ontario/6/1981(H1N1))]
Length=566
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMSRGSGSGIIISDTPIHDCDTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|AAL87868.1|AF455678_1 hemagglutinin [Influenza A virus (A/Swine/Minnesota/55551/00
(H1N2))]
Length=566
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/566 (91%), Positives = 545/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MK ILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKTILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVET +SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECESLFEASSWSYIVETPNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSVSSFERFEIFPK +SWPNHD++ GVTA+CP+AGAKSFY+NLIWLVKKG+SYPKLSK
Sbjct 121 HLSSVSSFERFEIFPKANSWPNHDTDSGVTASCPYAGAKSFYRNLIWLVKKGSSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYINDK KEVLV+WGIHHP S DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ
Sbjct 181 SYINDKKKEVLVIWGIHHPPNSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMTRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKL++ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLKMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABY81426.1| hemagglutinin [Influenza A virus (A/swine/Iowa/1/1986(H1N1))]
Length=566
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/566 (91%), Positives = 546/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVT ACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTVACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNAD+YVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADSYVFVGSSKYNKKFKPEIATRPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAIN+SLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINSSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDY KYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYLKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABS49932.1| hemagglutinin [Influenza A virus (A/swine/Ontario/1/1981(H1N1))]
Length=566
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPIHDCDTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR28614.1| hemagglutinin [Influenza A virus (A/swine/Kentucky/1/1976(H1N1))]
gb|ABV45838.1| hemagglutinin [Influenza A virus (A/Wisconsin/301/1976(H1N1))]
gb|ABX58668.1| hemagglutinin [Influenza A virus (A/swine/Wisconsin/30747/1976(H1N1))]
gb|ACK99410.1| hemagglutinin [Influenza A virus (A/swine/Wisconsin/30954/1976(H1N1))]
Length=566
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/566 (91%), Positives = 545/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGPGSGIIISDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVI+KMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIKKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR28537.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/10/1977(H1N1))]
Length=566
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFAVTNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGPGSGIIISDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVI+KMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIKKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABQ44394.1| hemagglutinin [Influenza A virus (A/New Jersey/1976(H1N1))]
Length=566
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/566 (91%), Positives = 545/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLLTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNT CQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTKCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD +STQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQRSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLDIWTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACE77927.1| hemagglutinin [Influenza A virus (A/swine/Korea/CAN01/2004(H1N1))]
Length=566
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/566 (90%), Positives = 547/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLYTFATA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK
Sbjct 1 MKAILVVLLYTFATADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRG+APLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE
Sbjct 61 LRGIAPLHLGKCNIAGWLLGNPECESLVTASSWSYIVETPNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
LSSVSSFERFEIFPK +SWPNH+++KGVTAACP+AGA SFY+NLIWLV+KGNSYPKLSK
Sbjct 121 HLSSVSSFERFEIFPKANSWPNHETDKGVTAACPYAGANSFYRNLIWLVQKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVR Q
Sbjct 181 SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAF M+R +GSGII+SD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFPMKRGSGSGIIVSDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+ LEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSQLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG
Sbjct 421 IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABW36333.1| hemagglutinin [Influenza A virus (A/swine/Ontario/2/1981(H1N1))]
Length=566
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNIGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMSRGSGSGIIISDTPIHDCDTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABW71503.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/2/1978(H1N1))]
Length=566
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR28647.1| hemagglutinin [Influenza A virus (A/swine/Nebraska/123/1977(H1N1))]
Length=566
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGI+ISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIVISDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABW36344.1| hemagglutinin [Influenza A virus (A/swine/Ontario/3/1981(H1N1))]
Length=566
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPIHDCDTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNRE+IDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREKIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABU80232.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/86/1977(H1N1))]
Length=566
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKA+L+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAMLLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+S+NGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSNNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHPSTS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPSTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP++IG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVSIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR28669.1| hemagglutinin [Influenza A virus (A/swine/Ontario/7/1981(H1N1))]
Length=566
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPIHDCDTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIY ILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYYILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABY51204.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/4/1978(H1N1))]
Length=566
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABS49921.1| hemagglutinin [Influenza A virus (A/swine/Iowa/1/1977(H1N1))]
Length=566
Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKL+K
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLNK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKE+LVLWGIHHPSTS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEILVLWGIHHPSTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGI+ISD PVHDCNT CQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGILISDAPVHDCNTKCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACQ42242.1| hemagglutinin [Influenza A virus (A/Auckland/1/2009(H1N1))]
Length=524
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/524 (100%), Positives = 524/524 (100%), Gaps = 0/524 (0%)
Query 43 VTHSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSS 102
VTHSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSS
Sbjct 1 VTHSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSS 60
Query 103 DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFY 162
DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFY
Sbjct 61 DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFY 120
Query 163 KNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSR 222
KNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSR
Sbjct 121 KNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSR 180
Query 223 YSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGI 282
YSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGI
Sbjct 181 YSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGI 240
Query 283 IISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQ 342
IISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQ
Sbjct 241 IISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQ 300
Query 343 SRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEK 402
SRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEK
Sbjct 301 SRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEK 360
Query 403 MNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNL 462
MNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNL
Sbjct 361 MNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNL 420
Query 463 YEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKL 522
YEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKL
Sbjct 421 YEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKL 480
Query 523 ESTRIYQILAIYSTVASSLVLVVSLGAISFWMCSNGSLQCRICI 566
ESTRIYQILAIYSTVASSLVLVVSLGAISFWMCSNGSLQCRICI
Sbjct 481 ESTRIYQILAIYSTVASSLVLVVSLGAISFWMCSNGSLQCRICI 524
>gb|ABR28581.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/82/1977(H1N1))]
gb|ABU80221.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/84/1977(H1N1))]
gb|ABU80243.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/87/1977(H1N1))]
gb|ABU80254.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/88/1977(H1N1))]
Length=566
Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP++IG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVSIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABU80410.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/48/1977(H1N1))]
gb|ABW36322.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/23/1976(H1N1))]
Length=566
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAI +VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAIPLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKL+K
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLNK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABR28625.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/27/1976(H1N1))]
gb|ABU80188.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/24/1975(H1N1))]
Length=566
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKL+K
Sbjct 121 QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLNK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNT CQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTKCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ACI48760.1| hemagglutinin [Influenza A virus (A/swine/Shanghai/1/2007(H1N2))]
Length=566
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAILVVLLY F NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILVVLLYAFTRGNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDF +YEELRE
Sbjct 61 LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFTNYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SYIN+K KEVLVLWGIHHPST+ DQQSLYQNAD YVFV +S+YS KFKP+IA RPKVR Q
Sbjct 181 SYINNKKKEVLVLWGIHHPSTNTDQQSLYQNADTYVFVATSKYSMKFKPKIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVH+C+TTCQTPK
Sbjct 241 AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHNCSTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNV+NLYEKVR+QLKNNAKEIGNG
Sbjct 421 IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVRNLYEKVRNQLKNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNR+EIDGVKLESTRIYQILAIYSTVASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNRKEIDGVKLESTRIYQILAIYSTVASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566
>gb|ABW86574.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/5/1978(H1N1))]
Length=566
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/566 (90%), Positives = 543/566 (95%), Gaps = 0/566 (0%)
Query 1 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK 60
MKAIL+VLL TF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK
Sbjct 1 MKAILLVLLCTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK 60
Query 61 LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE 120
L +APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE
Sbjct 61 LGRIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE 120
Query 121 QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK 180
QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK
Sbjct 121 QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK 180
Query 181 SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ 240
SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q
Sbjct 181 SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ 240
Query 241 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300
GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK
Sbjct 241 AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK 300
Query 301 GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG 360
GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG
Sbjct 301 GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG 360
Query 361 MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR
Sbjct 361 MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR 420
Query 421 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG 480
IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG
Sbjct 421 IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG 480
Query 481 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS 540
CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS
Sbjct 481 CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS 540
Query 541 LVLVVSLGAISFWMCSNGSLQCRICI 566
LVL+VSLGAISFWMCSNGSLQCRICI
Sbjct 541 LVLLVSLGAISFWMCSNGSLQCRICI 566