5e3k: Difference between revisions

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<StructureSection load='5e3k' size='340' side='right'caption='[[5e3k]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='5e3k' size='340' side='right'caption='[[5e3k]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5e3k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Toxgm Toxgm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E3K OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5E3K FirstGlance]. <br>
<table><tr><td colspan='2'>[[5e3k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Toxoplasma_gondii_ME49 Toxoplasma gondii ME49]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E3K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5E3K FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5JV:4-[(E)-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)AMINO]PENT-4-ENOIC+ACID'>5JV</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5dj9|5dj9]], [[4zwm|4zwm]], [[4zlv|4zlv]], [[4nog|4nog]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5JV:4-[(E)-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)AMINO]PENT-4-ENOIC+ACID'>5JV</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TGME49_269110 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=508771 TOXGM])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5e3k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e3k OCA], [https://pdbe.org/5e3k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5e3k RCSB], [https://www.ebi.ac.uk/pdbsum/5e3k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5e3k ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ornithine_aminotransferase Ornithine aminotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.13 2.6.1.13] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5e3k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e3k OCA], [http://pdbe.org/5e3k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5e3k RCSB], [http://www.ebi.ac.uk/pdbsum/5e3k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5e3k ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/S8EY38_TOXGM S8EY38_TOXGM]


==See Also==
==See Also==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Ornithine aminotransferase]]
[[Category: Toxoplasma gondii ME49]]
[[Category: Toxgm]]
[[Category: Anderson WF]]
[[Category: Anderson, W F]]
[[Category: Filippova EV]]
[[Category: Structural genomic]]
[[Category: Flores K]]
[[Category: Filippova, E V]]
[[Category: Le HV]]
[[Category: Flores, K]]
[[Category: McLeod RL]]
[[Category: Le, H V]]
[[Category: Minasov G]]
[[Category: McLeod, R L]]
[[Category: Silverman RB]]
[[Category: Minasov, G]]
[[Category: Silverman, R B]]
[[Category: Complex]]
[[Category: Csgid]]
[[Category: Inhibitor]]
[[Category: Parasite]]
[[Category: Pyridoxal 5'-phosphate]]
[[Category: Transferase]]

Latest revision as of 09:11, 5 July 2023

Crystal structure of the ornithine aminotransferase from Toxoplasma gondii ME49 in a complex with (S)-4-amino-5-fluoropentanoic acidCrystal structure of the ornithine aminotransferase from Toxoplasma gondii ME49 in a complex with (S)-4-amino-5-fluoropentanoic acid

Structural highlights

5e3k is a 2 chain structure with sequence from Toxoplasma gondii ME49. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

S8EY38_TOXGM

See Also

5e3k, resolution 1.70Å

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