6acv: Difference between revisions

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==the solution NMR structure of MBD domain==
==the solution NMR structure of MBD domain==
<StructureSection load='6acv' size='340' side='right'caption='[[6acv]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='6acv' size='340' side='right'caption='[[6acv]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6acv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ACV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ACV FirstGlance]. <br>
<table><tr><td colspan='2'>[[6acv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ACV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ACV FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6acv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6acv OCA], [http://pdbe.org/6acv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6acv RCSB], [http://www.ebi.ac.uk/pdbsum/6acv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6acv ProSAT]</span></td></tr>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6acv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6acv OCA], [https://pdbe.org/6acv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6acv RCSB], [https://www.ebi.ac.uk/pdbsum/6acv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6acv ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/MBD11_ARATH MBD11_ARATH]] Transcriptional regulator that binds DNA independently of its methylation status. Required during plant organogenesis and development.<ref>PMID:12954765</ref> <ref>PMID:15010609</ref>
[https://www.uniprot.org/uniprot/MBD11_ARATH MBD11_ARATH] Transcriptional regulator that binds DNA independently of its methylation status. Required during plant organogenesis and development.<ref>PMID:12954765</ref> <ref>PMID:15010609</ref>  
 
==See Also==
*[[Methyl CpG binding protein 3D structures|Methyl CpG binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Ding, Y M]]
[[Category: Ding YM]]
[[Category: Feng, Y Y]]
[[Category: Feng YY]]
[[Category: Li, F]]
[[Category: Li F]]
[[Category: Li, S L]]
[[Category: Li SL]]
[[Category: Liu, K]]
[[Category: Liu K]]
[[Category: Nie, Y]]
[[Category: Nie Y]]
[[Category: Yang, Y Y]]
[[Category: Yang YY]]
[[Category: Zhou, Y]]
[[Category: Zhou Y]]
[[Category: Bind methyl-cg and tg sites in dna]]
[[Category: Dna binding protein]]

Latest revision as of 13:36, 14 June 2023

the solution NMR structure of MBD domainthe solution NMR structure of MBD domain

Structural highlights

6acv is a 1 chain structure with sequence from Arabidopsis thaliana. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MBD11_ARATH Transcriptional regulator that binds DNA independently of its methylation status. Required during plant organogenesis and development.[1] [2]

See Also

References

  1. ↑ Berg A, Meza TJ, Mahic M, Thorstensen T, Kristiansen K, Aalen RB. Ten members of the Arabidopsis gene family encoding methyl-CpG-binding domain proteins are transcriptionally active and at least one, AtMBD11, is crucial for normal development. Nucleic Acids Res. 2003 Sep 15;31(18):5291-304. doi: 10.1093/nar/gkg735. PMID:12954765 doi:http://dx.doi.org/10.1093/nar/gkg735
  2. ↑ Scebba F, Bernacchia G, De Bastiani M, Evangelista M, Cantoni RM, Cella R, Locci MT, Pitto L. Arabidopsis MBD proteins show different binding specificities and nuclear localization. Plant Mol Biol. 2003 Nov;53(5):715-31. doi: 10.1023/B:PLAN.0000019118.56822.a9. PMID:15010609 doi:http://dx.doi.org/10.1023/B:PLAN.0000019118.56822.a9
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