1vek: Difference between revisions

Revision as of 10:35, 30 December 2020

Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNASolution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA

Structural highlights

1vek is a 1 chain structure with sequence from Arath. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:	Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K10D20 (ARATH)
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[UBP14_ARATH] Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Involved in seed and embryo development.^[1] ^[2]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

↑ Doelling JH, Yan N, Kurepa J, Walker J, Vierstra RD. The ubiquitin-specific protease UBP14 is essential for early embryo development in Arabidopsis thaliana. Plant J. 2001 Sep;27(5):393-405. PMID:11576424
↑ Tzafrir I, McElver JA, Liu Cm CM, Yang LJ, Wu JQ, Martinez A, Patton DA, Meinke DW. Diversity of TITAN functions in Arabidopsis seed development. Plant Physiol. 2002 Jan;128(1):38-51. PMID:11788751

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OCA

[1] Doelling JH, Yan N, Kurepa J, Walker J, Vierstra RD. The ubiquitin-specific protease UBP14 is essential for early embryo development in Arabidopsis thaliana. Plant J. 2001 Sep;27(5):393-405. PMID:11576424

[2] Tzafrir I, McElver JA, Liu Cm CM, Yang LJ, Wu JQ, Martinez A, Patton DA, Meinke DW. Diversity of TITAN functions in Arabidopsis seed development. Plant Physiol. 2002 Jan;128(1):38-51. PMID:11788751

[1]

[2]

@@ Line 1: / Line 1: @@
 ==Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA==
-<StructureSection load='1vek' size='340' side='right' caption='[[1vek]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+<StructureSection load='1vek' size='340' side='right'caption='[[1vek]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1vek]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VEK FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1vek]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1VEK FirstGlance]. <br>
 </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K10D20 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vek OCA], [http://pdbe.org/1vek PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vek RCSB], [http://www.ebi.ac.uk/pdbsum/1vek PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vek ProSAT], [http://www.topsan.org/Proteins/RSGI/1vek TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1vek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vek OCA], [http://pdbe.org/1vek PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vek RCSB], [http://www.ebi.ac.uk/pdbsum/1vek PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vek ProSAT], [http://www.topsan.org/Proteins/RSGI/1vek TOPSAN]</span></td></tr>
 </table>
 == Function ==
@@ Line 24: / Line 24: @@
 </StructureSection>
 [[Category: Arath]]
+[[Category: Large Structures]]
 [[Category: Abe, T]]
 [[Category: Higuchi, Y]]

1vek: Difference between revisions

Revision as of 10:35, 30 December 2020

Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNASolution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA

Structural highlights

Function

Evolutionary Conservation

References

Contents

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1vek: Difference between revisions

Revision as of 10:35, 30 December 2020

Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNASolution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA

Structural highlights

Function

Evolutionary Conservation

References

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Navigation menu

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