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Cadherin 3D structures: Difference between revisions

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New page: == 3D Structures of Cadherin == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| * CDH5 **2koh – mCDH5+PAR3-...
 
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|
{{#tree:id=OrganizedByTopic|openlevels=0|
*CDH1 encoded by CDH1
**[[6cxy]] – hCDH1 + antibody - human<br />


* CDH5  
* CDH5  
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* CDH23  
* CDH23  
 
**[[3mvs]], [[2whv]] – mCDH23 N-terminal<br />
**[[2kbr]] – hCDH23 peptide+harmonin – NMR <br />
**[[2kbr]] – hCDH23 peptide+harmonin – NMR - human<br />
**[[2kbs]] - hCDH23 C-terminal peptide+harmonin PDZ2 – NMR<br />
**[[2kbs]] - hCDH23 C-terminal peptide+harmonin PDZ2 – NMR<br />
**[[5wj8]] - hCDH23 EC13-EC14<br />
**[[5vvm]] - hCDH23 EC21-EC23<br />
**[[3mvs]], [[2whv]] – mCDH23 N-terminal<br />
**[[2wbx]] – mCDH23 EC1<br />
**[[2wbx]] – mCDH23 EC1<br />
**[[2wcp]] - mCDH23 EC2<br />
**[[2wcp]] - mCDH23 EC2<br />
**[[2wd0]] - mCDH23 EC1-EC2 (mutant)<br />
**[[2wd0]] - mCDH23 EC1-EC2 (mutant)<br />
**[[5w4t]] - CDH23 EC1-EC3 - zebrafish<br />
**[[5tfm]] - mCDH23 EC6-EC8<br />
**[[5tfm]] - mCDH23 EC6-EC8<br />
**[[5tfl]] - mCDH23 EC7-EC8<br />
**[[5tfl]] - mCDH23 EC7-EC8<br />
**[[5vh2]] - mCDH23 EC12-EC13 (mutant)<br />
**[[5vh2]] - mCDH23 EC12-EC13 (mutant)<br />
**[[5wj8]] - hCDH23 EC13-EC14<br />
**[[5wjm]] - mCDH23 EC17-EC18<br />
**[[5wjm]] - mCDH23 EC17-EC18<br />
**[[5tfk]] - mCDH23 EC19-EC21<br />
**[[5tfk]] - mCDH23 EC19-EC21<br />
**[[5i8d]], [[5ulu]], [[5un2]] - mCDH23 EC19-EC21 (mutant)<br />
**[[5i8d]], [[5ulu]], [[5un2]] - mCDH23 EC19-EC21 (mutant)<br />
**[[5vvm]] - hCDH23 EC21-EC23<br />
**[[5uz8]] - mCDH23 EC22-EC24<br />
**[[5uz8]] - mCDH23 EC22-EC24<br />
**[[5vt8]] - mCDH23 EC23-EC25<br />
**[[5vt8]] - mCDH23 EC23-EC25<br />
**[[4apx]], [[4aq8]], [[4axw]], [[4xxw]] - mCDH23 EC1-EC2 + Prot-CDH15<br />
**[[4apx]], [[4aq8]], [[4axw]], [[4xxw]] - mCDH23 EC1-EC2 + Prot-CDH15<br />
**[[4aqa]], [[4aqe]] - mCDH23 EC1-EC2 (mutant) + Prot-CDH15
**[[4aqa]], [[4aqe]] - mCDH23 EC1-EC2 (mutant) + Prot-CDH15<br />
**[[5w4t]] - CDH23 EC1-EC3 - zebrafish<br />


* C-CDH “classical”  
* C-CDH “classical”  
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* E-CDH epithelial or CDH1
* E-CDH epithelial or CDH1


**[[1q1p]], [[1ff5]], [[1edh]], [[3lne]], [[3lnf]], [[3lng]], [[3lnh]], [[3lni]], [[2qvf]] – mE-CDH EC1-EC2<br />
**[[3q2v]] – mE-CDH ectodomain<br />
**[[4zt1]], [[2o72]] – hE-CDH EC1-EC2<br />
**[[4zt1]], [[2o72]] – hE-CDH EC1-EC2<br />
**[[4zte]] – hE-CDH EC1-EC2 + inhibitor<br />
**[[4zte]] – hE-CDH EC1-EC2 + inhibitor<br />
**[[6fek]] – hE-CDH EC1-EC2 + antibody<br />
**[[6fek]] – hE-CDH EC1-EC2 + antibody<br />
**[[3ifq]] – hE-CDH EC1-EC3 <br />
**[[3ff7]], [[3ff8]] - hE-CDH EC1-EC3+NK cell receptor<br />
**[[2omt]], [[2omu]], [[2omx]], [[2omz]], [[2omv]], [[2omw]], [[2omy]] – hE-CDH EC1+internalin (mutant)<br />
**[[1q1p]], [[1ff5]], [[1edh]], [[3lne]], [[3lnf]], [[3lng]], [[3lnh]], [[3lni]], [[2qvf]] – mE-CDH EC1-EC2<br />
**[[3q2v]] – mE-CDH ectodomain<br />
**[[1edh]] - mE-CDH EC1-EC2+Ca<br />
**[[1edh]] - mE-CDH EC1-EC2+Ca<br />
**[[3q2l]], [[3q2n]], [[3qrb]] - mE-CDH EC1-EC2 (mutant)<br />
**[[3q2l]], [[3q2n]], [[3qrb]] - mE-CDH EC1-EC2 (mutant)<br />
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**[[1i7x]], [[1i7w]] – mE-CDH cytoplasmic domain +catenin<br />
**[[1i7x]], [[1i7w]] – mE-CDH cytoplasmic domain +catenin<br />
**[[4qd2]] – mE-CDH + botulinum neurotoxin<br />
**[[4qd2]] – mE-CDH + botulinum neurotoxin<br />
**[[3ifq]] – hE-CDH EC1-EC3 <br />
**[[3ff7]], [[3ff8]] - hE-CDH EC1-EC3+NK cell receptor<br />
**[[2omt]], [[2omu]], [[2omx]], [[2omz]], [[2omv]], [[2omw]], [[2omy]] – hE-CDH EC1+internalin (mutant)<br />
**[[1o6s]] – E-CDH N-terminal+internalin – ''Listeria monocytogenes''<br />
**[[1o6s]] – E-CDH N-terminal+internalin – ''Listeria monocytogenes''<br />
**[[4qd2]] – mE-CDH + botulinum neurotoxin<br />


*K-CDH kidney or CDH6
*K-CDH kidney or CDH6
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* T-CDH membrane bound  
* T-CDH membrane bound  


**[[2v37]] – hT-CDH N-terminal - NMR<br />
**[[3k5r]], [[6cg6]] – mT-CDH EC1-EC2<br />
**[[3k5r]], [[6cg6]] – mT-CDH EC1-EC2<br />
**[[3k6f]] - mT-CDH EC1<br />
**[[3k5s]] - cT-CDH EC1-EC2 <br />
**[[3k5s]] - cT-CDH EC1-EC2 <br />
**[[3k6i]] - cT-CDH EC1<br />
**[[3k6d]] - XlT-CDH EC1 <br />
**[[3k6d]] - XlT-CDH EC1 <br />
**[[3k6f]] - mT-CDH EC1<br />
**[[3k6i]] - cT-CDH EC1<br />
**[[2v37]] – hT-CDH N-terminal - NMR<br />


* N-CDH neuronal  
* N-CDH neuronal  
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*P-CDH placental or CDH3
*P-CDH placental or CDH3


**[[4nqq]] – mP-CDH EC1-EC2<br />
**[[4oy9]], [[4zml]], [[4zmn]], [[4zmq]], [[4zmt]], [[4zmw]], [[4zmz]] – hP-CDH EC1-EC2<br />
**[[4oy9]], [[4zml]], [[4zmn]], [[4zmq]], [[4zmt]], [[4zmw]], [[4zmz]] – hP-CDH EC1-EC2<br />
**[[4zmo]], [[4zmp]], [[4zmv]], [[4zmx]], [[4zmy]] – hP-CDH EC1-EC2 (mutant)<br />
**[[4zmo]], [[4zmp]], [[4zmv]], [[4zmx]], [[4zmy]] – hP-CDH EC1-EC2 (mutant)<br />
**[[5jyl]], [[5jym]] – hP-CDH EC1-EC2 + SCFV TSP7<br />
**[[5jyl]], [[5jym]] – hP-CDH EC1-EC2 + SCFV TSP7<br />
**[[4nqq]] – mP-CDH EC1-EC2<br />


*VE-CDH vascular epithelial
*VE-CDH vascular epithelial
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* Protocadherin  
* Protocadherin  


**[[6bx7]] - hProt-CDH1 EC1-EC4<br />
**[[6bx7]], [[6vfp]] - hProt-CDH1 EC1-EC4<br />
**[[2yst]] – hProt-CDH7 EC3 – NMR<br />
**[[2yst]] – hProt-CDH7 EC3 – NMR<br />
**[[6mga]] - hProt-CDH1 EC4<br />
**[[6pim]] - hProt-CDH1 EC3-EC4<br />
**[[6n2e]] - hProt-CDH15 EC1-EC2 + mCDH23<br />
**[[2ee0]] - hProt-CDH9 Ca domain – NMR<br />
**[[2ee0]] - hProt-CDH9 Ca domain – NMR<br />
**[[1wyj]] - mProt-CDH β 14 - NMR<br />
**[[1wyj]] - mProt-CDH β 14 - NMR<br />
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* Desmoglein  
* Desmoglein  


**[[2yqg]] – hDes-CDH2 EC1<br />
**[[2yqg]] – hDes-CDH2 EC1 47-162<br />
**[[5erd]] – hDes-CDH2 ectodomain<br />
**[[5erd]] – hDes-CDH2 ectodomain 50-602<br />
**[[5eqx]] – hDes-CDH3 ectodomain<br />
**[[5eqx]] – hDes-CDH3 ectodomain<br />
**[[6sit]] – hDes2 EC2-EC3 149-386 + adenovirus fiber protein <br />
**[[6qnt]], [[6qnu]] – hDesmc2 ectodomain + adenovirus fiber protein – Cryo EM<br />
**[[6qnt]], [[6qnu]] – hDesmc2 ectodomain + adenovirus fiber protein – Cryo EM<br />


Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel
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