Cadherin 3D structures

3D Structures of Cadherin3D Structures of Cadherin

Updated on 25-December-2024

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• CDH1 encoded by CDH1
  • 6cxy – hCDH1 + antibody - human
    
  • 8h62 – hCDH1 EC12 + internalin A
    
• CDH5
  • 2koh – mCDH5+PAR3-PDZ3 - mouse
    
• CDH6
  • 3lnd – mCDH6 EC12 (mutant)
    
• CDH encoded by CDH7
  • 6cgs – mCDH7 EC1-EC2
    
• CDH8
  • 1zxk – mCDH8 EC1
    
  • 2a62 - mCDH8 EC1-EC3
    
• CDH11
  • 2a4c, 2a4e – mCDH11 EC1
    
  • 6cgb - mCDH11 EC1/CDH6 EC2
    
• CDH encoded by CDH17
  • 6ulm, 7ev1 – hCDH17 EC1-EC2
    
  • 7cym – hCDH17 EC1-EC4
    
• CDH20
  • 1zvn – cCDH20 EC1 – chicken
    
• CDH encoded by CDH22
  • 6cg7 – mCDH20 EC1-EC2
    
• CDH23

• • 2kbr – hCDH23 peptide+harmonin – NMR
    
  • 2kbs - hCDH23 C-terminal peptide+harmonin PDZ2 – NMR
    
  • 5wj8 - hCDH23 EC13-EC14
    
  • 5vvm - hCDH23 EC21-EC23
    
  • 3mvs, 2whv – mCDH23 N-terminal
    
  • 2wbx – mCDH23 EC1
    
  • 2wcp - mCDH23 EC2
    
  • 2wd0 - mCDH23 EC1-EC2 (mutant)
    
  • 5tfm - mCDH23 EC6-EC8
    
  • 5tfl - mCDH23 EC7-EC8
    
  • 7uqu - mCDH23 EC9
    
  • 7t3s - mCDH23 EC8-EC9
    
  • 5vh2 - mCDH23 EC12-EC13 (mutant)
    
  • 7u71 - mCDH23 EC13-EC15
    
  • 7skh - mCDH23 EC16-EC17
    
  • 5wjm - mCDH23 EC17-EC18
    
  • 7t80 - mCDH23 EC18-EC19
    
  • 5tfk - mCDH23 EC19-EC21
    
  • 5i8d, 5ulu, 5un2 - mCDH23 EC19-EC21 (mutant)
    
  • 5uz8 - mCDH23 EC22-EC24
    
  • 5vt8 - mCDH23 EC23-EC25
    
  • 7suu - mCDH23 EC25-EC26
    
  • 8tri - mCDH23 EC25 + MAD28
    
  • 4apx, 4aq8, 4axw, 4xxw - mCDH23 EC1-EC2 + Prot-CDH15
    
  • 4aqa, 4aqe - mCDH23 EC1-EC2 (mutant) + Prot-CDH15
    
  • 7n4p – CDH23 EC1-EC2 - lizard
    
  • 7sgx – CDH23 EC1-EC2 - turtle
    
  • 7sb6, 7scm – CDH23 EC1-EC2 - synthetic
    
  • 5w4t - CDH23 EC1-EC3 - zebrafish
    
  • 8e51 – CDH23 EC1-EC2 + Prot-CDH15 EC1-EC2 - catfish
    
• C-CDH “classical”
  • 1l3w – XlC-CDH ectodomain - Xenopus laevis
    
  • 1q5b, 1q5c, 1q55, 1q5a – C-CDH model into desmosome – electron tomography
    
  • 7tni - CDH23 EC12 (mutant) – tobacco moth
    
• E-CDH epithelial or CDH1
  • 4zt1, 2o72 – hE-CDH EC1-EC2
    
  • 4zte – hE-CDH EC1-EC2 + inhibitor
    
  • 6fek, 6vel – hE-CDH EC1-EC2 + antibody
    
  • 7stz – hE-CDH EC1-EC5 + antibody
    
  • 3ifq – hE-CDH EC1-EC3
    
  • 3ff7, 3ff8 - hE-CDH EC1-EC3+NK cell receptor
    
  • 2omt, 2omu, 2omx, 2omz, 2omv, 2omw, 2omy – hE-CDH EC1+internalin (mutant)
    
  • 1q1p, 1ff5, 1edh, 3lne, 3lnf, 3lng, 3lnh, 3lni, 2qvf – mE-CDH EC1-EC2
    
  • 3q2v – mE-CDH ectodomain
    
  • 1edh - mE-CDH EC1-EC2+Ca
    
  • 3q2l, 3q2n, 3qrb - mE-CDH EC1-EC2 (mutant)
    
  • 1suh – mE-CDH N-terminal - NMR
    
  • 1i7x, 1i7w – mE-CDH cytoplasmic domain +catenin
    
  • 4qd2 – mE-CDH + botulinum neurotoxin
    
  • 1o6s – E-CDH N-terminal+internalin – Listeria monocytogenes
    
• K-CDH kidney or CDH6
  • 5veb – hK-CDH EC5 + antibody
    
  • 6cgu – mK-CDH EC1-EC2
    
• T-CDH membrane bound
  • 2v37 – hT-CDH N-terminal - NMR
    
  • 3k5r, 6cg6 – mT-CDH EC1-EC2
    
  • 3k6f - mT-CDH EC1
    
  • 3k5s - cT-CDH EC1-EC2
    
  • 3k6i - cT-CDH EC1
    
  • 3k6d - XlT-CDH EC1
    
• N-CDH neuronal
  • 1nch, 1nci – mN-CDH
    
  • 1ncg – mN-CDH (mutant)
    
  • 2qvi, 4nuq – mN-CDH EC1-EC2
    
  • 4num, 4nup – mN-CDH EC1-EC2 (mutant)
    
  • 1ncj – mN-CDH two domains
    
  • 3q2w – mN-CDH ectodomain
    
  • 1op4 - mN-CDH prodomain - NMR
    
  • 3ubf – DmN-CDH ectodomain – Drosophila melanogaster
    
  • 3ubh - DmN-CDH EC1-EC4
    
  • 3ubg - DmN-CDH EC1-EC3
• P-CDH placental or CDH3
  • 4oy9, 4zml, 4zmn, 4zmq, 4zmt, 4zmw, 4zmz, 6ztb – hP-CDH EC1-EC2 residues 108-324
    
  • 4zmo, 4zmp, 4zmv, 4zmx, 4zmy – hP-CDH EC1-EC2 (mutant)
    
  • 5jyl, 5jym – hP-CDH EC1-EC2 + SCFV TSP7
    
  • 6ztr – hP-CDH EC1-EC2 + antibody
    
  • 7cme, 7cmf, 8hyi – hP-CDH EC1-EC2 + inhibitor
    
  • 4nqq – mP-CDH EC1-EC2
    
• VE-CDH vascular epithelial
  • 3ppe – cVE-CDH EC1+EC2
    
• Protocadherin
  • 6bx7, 6mga, 6vfp - hProt-CDH1 EC1-EC4
    
  • 2yst – hProt-CDH7 EC3 – NMR
    
  • 6pim - hProt-CDH1 EC3-EC4
    
  • 6vfv - hProt-CDH8 EC5-EC6
    
  • 2ee0 - hProt-CDH9 Ca domain – NMR
    
  • 6vfq, 6vfw - hProt-CDH10 EC1-EC4
    
  • 6vg4 - hProt-CDH10 ectodomain
    
  • 6n22 - hProt-CDH15 EC1-EC2
    
  • 6n2e - hProt-CDH15 EC1-EC2 + mCDH23
    
  • 6mfo - hProt-CDH15 EC1-EC3 (mutant)
    
  • 6eb5 - hProt-CDH15 EC2-EC3 (mutant)
    
  • 6e8f - hProt-CDH15 EC3-EC5
    
  • 5t4n - hProt-CDH15 EC3-EC5 (mutant)
    
  • 8egx - hProt-CDH16 EC1-EC4 + hProt-CDHFAT 4 EC1-EC4
    
  • 8egw - hProt-CDH16 EC1-EC3 + hProt-CDHFAT 4 EC1-EC4
    
  • 6vft - hProt-CDH17 EC1-EC4
    
  • 6vfr - hProt-CDH18 EC1-EC4
    
  • 6vfu - hProt-CDH19 EC1-EC4
    
  • 7n86 - hProt-CDH24 EC1-EC2
    
  • 6meq, 6mer - hProt-CDH1 g B3 EC1-EC4
    
  • 6c13 - mProt-CDH15 – Cryo EM
    
  • 1wyj - mProt-CDH β 14 - NMR
    
  • 1wuz - mProt-CDH4 EC1 – NMR
    
  • 5cyx, 6cv7 - mProt-CDH2 EC1+EC2+EC3
    
  • 6bxu - mProt-CDH15 EC5-EC7 (mutant)
    
  • 6bwn - mProt-CDH15 EC6-EC7
    
  • 5tpk - mProt-CDH15 EC7-EC8 (mutant)
    
  • 6c10 - mProt-CDH15 EC11
    
  • 6eet - mProt-CDH2 EC9
    
  • 5szl - mProt-CDH γ A1 EC1-EC4
    
  • 5t9t - mProt-CDH γ B2 EC1-EC5
    
  • 6e6b - mProt-CDH γ B4 EC domain
    
  • 5v5x - mProt-CDH γ B7 EC3-EC6
    
  • 7jgz, 7rgf - mProt-CDH gamma C4 EC1-EC4
    
  • 6vg1 - Prot-CDH 8.1 EC1-EC6 - frog
    
  • 6pgw - zProt-CDH19 EC3-EC6
    
• Desmoglein
  • 2yqg – hDes-2 EC1 47-162
    
  • 5erd – hDes-2 ectodomain 50-602
    
  • 5eqx – hDes-3 ectodomain
    
  • 6sit – hDes2 EC2-EC3 149-386 + adenovirus fiber protein
    
  • 6qnt, 6qnu, 8qjx, 8qjy – hDes-2 ectodomain + adenovirus fiber protein – Cryo EM
    
  • 8qk3 – hDes-2 ectodomain + adenovirus fiber protein + CD46 – Cryo EM
    
  • 7agf, 7agg – hDes-2 EC2-EC3 + adenovirus fiber protein – Cryo EM
    
  • 7a7d – hDes-2 + desmocollin-2 – Cryo EM
    
• Desmocollin
  • 5iry – hDesmc1 ectodomain
    
  • 5erp – hDesmc2 EC2-EC5
    
  • 5j5j – hDesmc2 EC1 + Des-2 EC2-EC5