5cay: Difference between revisions

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==Envelope glycoprotein gp120 core from HIV type 2 bound to the first two domains of human soluble CD4 receptor==
==Envelope glycoprotein gp120 core from HIV type 2 bound to the first two domains of human soluble CD4 receptor==
<StructureSection load='5cay' size='340' side='right' caption='[[5cay]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='5cay' size='340' side='right'caption='[[5cay]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5cay]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hiv-2 Hiv-2] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CAY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CAY FirstGlance]. <br>
<table><tr><td colspan='2'>[[5cay]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hiv-2 Hiv-2] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CAY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CAY FirstGlance]. <br>
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==See Also==
==See Also==
*[[CD4|CD4]]
*[[CD4 3D structures|CD4 3D structures]]
*[[Gp120 3D structures|Gp120 3D structures]]
*[[Immunodeficiency virus protease 3D structures|Immunodeficiency virus protease 3D structures]]
== References ==
== References ==
<references/>
<references/>
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[[Category: Hiv-2]]
[[Category: Hiv-2]]
[[Category: Human]]
[[Category: Human]]
[[Category: Large Structures]]
[[Category: Bjorkman, P J]]
[[Category: Bjorkman, P J]]
[[Category: Davenport, Y W]]
[[Category: Davenport, Y W]]

Revision as of 18:59, 11 December 2019

Envelope glycoprotein gp120 core from HIV type 2 bound to the first two domains of human soluble CD4 receptorEnvelope glycoprotein gp120 core from HIV type 2 bound to the first two domains of human soluble CD4 receptor

Structural highlights

5cay is a 2 chain structure with sequence from Hiv-2 and Human. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Gene:CD4 (HUMAN)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[CD4_HUMAN] Accessory protein for MHC class-II antigen/T-cell receptor interaction. May regulate T-cell activation. Induces the aggregation of lipid rafts.

Publication Abstract from PubMed

HIV-2 is a non-pandemic form of the virus causing AIDS, and the majority of HIV-2-infected patients exhibit long-term non-progression. The HIV-1 and HIV-2 envelope glycoproteins, the sole targets of neutralizing antibodies, share 30-40% identity. As a first step in understanding the reduced pathogenicity of HIV-2, we solved a 3.0 A structure of an HIV-2 gp120 bound to the host receptor CD4, which reveals structural similarity to HIV-1 gp120 despite divergence in amino acid sequence.

Structure of an HIV-2 gp120 in complex with CD4.,Davenport YW, West AP Jr, Bjorkman PJ J Virol. 2015 Nov 25. pii: JVI.02678-15. PMID:26608312[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Davenport YW, West AP Jr, Bjorkman PJ. Structure of an HIV-2 gp120 in complex with CD4. J Virol. 2015 Nov 25. pii: JVI.02678-15. PMID:26608312 doi:http://dx.doi.org/10.1128/JVI.02678-15

5cay, resolution 3.00Å

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OCA