4yhw: Difference between revisions
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==Yeast Prp3 (296-469) in complex with fragment of U4/U6 di-snRNA== | ==Yeast Prp3 (296-469) in complex with fragment of U4/U6 di-snRNA== | ||
<StructureSection load='4yhw' size='340' side='right' caption='[[4yhw]], [[Resolution|resolution]] 3.25Å' scene=''> | <StructureSection load='4yhw' size='340' side='right'caption='[[4yhw]], [[Resolution|resolution]] 3.25Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4yhw]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YHW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YHW FirstGlance]. <br> | <table><tr><td colspan='2'>[[4yhw]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YHW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YHW FirstGlance]. <br> | ||
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yhu|4yhu]], [[4yhv|4yhv]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yhu|4yhu]], [[4yhv|4yhv]]</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yhw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yhw OCA], [http://pdbe.org/4yhw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yhw RCSB], [http://www.ebi.ac.uk/pdbsum/4yhw PDBsum]</span></td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRP3, RNA3, YDR473C, D8035.16 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yhw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yhw OCA], [http://pdbe.org/4yhw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yhw RCSB], [http://www.ebi.ac.uk/pdbsum/4yhw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4yhw ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | == Function == | ||
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</div> | </div> | ||
<div class="pdbe-citations 4yhw" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 4yhw" style="background-color:#fffaf0;"></div> | ||
==See Also== | |||
*[[Pre-mRNA-splicing factor|Pre-mRNA-splicing factor]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Atcc 18824]] | |||
[[Category: Large Structures]] | |||
[[Category: Liu, S]] | [[Category: Liu, S]] | ||
[[Category: Wahl, M C]] | [[Category: Wahl, M C]] | ||
Revision as of 10:22, 12 June 2019
Yeast Prp3 (296-469) in complex with fragment of U4/U6 di-snRNAYeast Prp3 (296-469) in complex with fragment of U4/U6 di-snRNA
Structural highlights
Function[PRP3_YEAST] Participates in pre-mRNA splicing. Part of the U4/U5/U6 tri-snRNP complex, one of the building blocks of the spliceosome.[1] Publication Abstract from PubMedPrp3 is an essential U4/U6 di-snRNP-associated protein whose functions and molecular mechanisms in pre-mRNA splicing are presently poorly understood. We show by structural and biochemical analyses that Prp3 contains a bipartite U4/U6 di-snRNA-binding region comprising an expanded ferredoxin-like fold, which recognizes a 3'-overhang of U6 snRNA, and a preceding peptide, which binds U4/U6 stem II. Phylogenetic analyses revealed that the single-stranded RNA-binding domain is exclusively found in Prp3 orthologs, thus qualifying as a spliceosome-specific RNA interaction module. The composite double-stranded/single-stranded RNA-binding region assembles cooperatively with Snu13 and Prp31 on U4/U6 di-snRNAs and inhibits Brr2-mediated U4/U6 di-snRNA unwinding in vitro. RNP-disrupting mutations in Prp3 lead to U4/U6*U5 tri-snRNP assembly and splicing defects in vivo. Our results reveal how Prp3 acts as an important bridge between U4/U6 and U5 in the tri-snRNP and comparison with a Prp24-U6 snRNA recycling complex suggests how Prp3 may be involved in U4/U6 re-assembly after splicing. A composite double-/single-stranded RNA-binding region in protein Prp3 supports tri-snRNP stability and splicing.,Liu S, Mozaffari-Jovin S, Wollenhaupt J, Santos KF, Theuser M, Dunin-Horkawicz S, Fabrizio P, Bujnicki JM, Luhrmann R, Wahl MC Elife. 2015 Jul 10;4. doi: 10.7554/eLife.07320. PMID:26161500[2] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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