4bya: Difference between revisions

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==Calmodulin, C-terminal domain, M144H mutant==
==Calmodulin, C-terminal domain, M144H mutant==
<StructureSection load='4bya' size='340' side='right' caption='[[4bya]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='4bya' size='340' side='right'caption='[[4bya]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4bya]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BYA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BYA FirstGlance]. <br>
<table><tr><td colspan='2'>[[4bya]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BYA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BYA FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bya OCA], [http://pdbe.org/4bya PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4bya RCSB], [http://www.ebi.ac.uk/pdbsum/4bya PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bya OCA], [http://pdbe.org/4bya PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4bya RCSB], [http://www.ebi.ac.uk/pdbsum/4bya PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4bya ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Chick]]
[[Category: Large Structures]]
[[Category: Korendovych, I V]]
[[Category: Korendovych, I V]]
[[Category: Moroz, Y S]]
[[Category: Moroz, Y S]]

Revision as of 16:05, 13 March 2019

Calmodulin, C-terminal domain, M144H mutantCalmodulin, C-terminal domain, M144H mutant

Structural highlights

4bya is a 1 chain structure with sequence from Chick. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Design of a new catalytic function in proteins, apart from its inherent practical value, is important for fundamental understanding of enzymatic activity. Using a computationally inexpensive, minimalistic approach that focuses on introducing a single highly reactive residue into proteins to achieve catalysis we converted a 74-residue-long C-terminal domain of calmodulin into an efficient esterase. The catalytic efficiency of the resulting stereoselective, allosterically regulated catalyst, nicknamed AlleyCatE, is higher than that of any previously reported de novo designed esterases. The simplicity of our design protocol should complement and expand the capabilities of current state-of-art approaches to protein design. These results show that even a small nonenzymatic protein can efficiently attain catalytic activities in various reactions (Kemp elimination, ester hydrolysis, retroaldol reaction) as a result of a single mutation. In other words, proteins can be just one mutation away from becoming entry points for subsequent evolution.

New Tricks for Old Proteins: Single Mutations in a Nonenzymatic Protein Give Rise to Various Enzymatic Activities.,Moroz YS, Dunston TT, Makhlynets OV, Moroz OV, Wu Y, Yoon JH, Olsen AB, McLaughlin JM, Mack KL, Gosavi PM, van Nuland NA, Korendovych IV J Am Chem Soc. 2015 Nov 20. PMID:26555770[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Moroz YS, Dunston TT, Makhlynets OV, Moroz OV, Wu Y, Yoon JH, Olsen AB, McLaughlin JM, Mack KL, Gosavi PM, van Nuland NA, Korendovych IV. New Tricks for Old Proteins: Single Mutations in a Nonenzymatic Protein Give Rise to Various Enzymatic Activities. J Am Chem Soc. 2015 Nov 20. PMID:26555770 doi:http://dx.doi.org/10.1021/jacs.5b07812
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