1zvm: Difference between revisions

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==Crystal structure of human CD38: cyclic-ADP-ribosyl synthetase/NAD+ glycohydrolase==
==Crystal structure of human CD38: cyclic-ADP-ribosyl synthetase/NAD+ glycohydrolase==
<StructureSection load='1zvm' size='340' side='right' caption='[[1zvm]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='1zvm' size='340' side='right' caption='[[1zvm]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD38 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD38 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/NAD(+)_nucleosidase NAD(+) nucleosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.5 3.2.2.5] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/NAD(+)_nucleosidase NAD(+) nucleosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.5 3.2.2.5] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zvm OCA], [http://pdbe.org/1zvm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zvm RCSB], [http://www.ebi.ac.uk/pdbsum/1zvm PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zvm OCA], [http://pdbe.org/1zvm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zvm RCSB], [http://www.ebi.ac.uk/pdbsum/1zvm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1zvm ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zv/1zvm_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zv/1zvm_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zvm ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zvm ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
*[[Cluster of Differentiation CD38|Cluster of Differentiation CD38]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>

Revision as of 12:16, 2 May 2018

Crystal structure of human CD38: cyclic-ADP-ribosyl synthetase/NAD+ glycohydrolaseCrystal structure of human CD38: cyclic-ADP-ribosyl synthetase/NAD+ glycohydrolase

Structural highlights

1zvm is a 4 chain structure with sequence from Human. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:CD38 (HUMAN)
Activity:NAD(+) nucleosidase, with EC number 3.2.2.5
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[CD38_HUMAN] Synthesizes cyclic ADP-ribose, a second messenger for glucose-induced insulin secretion. Also has cADPr hydrolase activity. Also moonlights as a receptor in cells of the immune system.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1zvm, resolution 2.20Å

Drag the structure with the mouse to rotate

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OCA