RNA ligase: Difference between revisions
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<StructureSection load='1vgj' size='350' side='right' scene='RNA_ligase/Cv/1' caption='Se-Met RNA ligase (PDB code [[1vgj]])'> | <StructureSection load='1vgj' size='350' side='right' scene='RNA_ligase/Cv/1' caption='Se-Met RNA ligase (PDB code [[1vgj]])'> | ||
'''RNA ligase''' (LigR) is an enzyme which ligates two ribonucleotide chains using ATP and producing AMP, diphosphate and the ligated ribonucleotide chain<ref>PMID:18972386</ref>. See more details in [[T4 RNA ligase 2 (Rnl2)]] and [[Ligases]]. | '''RNA ligase''' (LigR) is an enzyme which ligates two ribonucleotide chains using ATP and producing AMP, diphosphate and the ligated ribonucleotide chain<ref>PMID:18972386</ref>. See more details in [[T4 RNA ligase 2 (Rnl2)]] and [[Ligases]]. | ||
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
{{#tree:id=OrganizedByTopic|openlevels=0| | |||
*RNA ligase | |||
**[[2c5u]] – T4LigR 1 RNA-binding domain - Enterobacteria phage T4<br /> | |||
**[[1s68]] - T4LigR 2 N-terminal<br /> | |||
**[[1vgj]], [[1vdx]] – PyLigR – ''Pyrococcus horikoshii''<br /> | |||
**[[2vug]] – LigR – ''Pyrococcus abyssi''<br /> | |||
**[[5cot]] – NgLigR – ''Naegleria gruberi''<br /> | |||
**[[1xdn]] – LigR 1 editing – ''Trypanosoma brucei''<br /> | |||
**[[1iuh]] – LigR 2’-5’ – ''Thermus thermophilus''<br /> | |||
**[[5cot]] – aLigR – amoeba<br /> | |||
* RNA ligase complex | |||
**[[5tt6]] – T4LigR 1 + ATP<br /> | |||
**[[2hvr]], [[2hvs]] – T4LigR 2 + DNA + nucleotide <br /> | |||
**[[2hvq]] - T4LigR 2 + adenosine derivative<br /> | |||
**[[4qak]] - LigR 2’-5’ + AMP – ''Escherichia coli''<br /> | |||
**[[5cou]] – aLigR + ATP<br /> | |||
**[[5d1o]], [[5d1p]] – LigR ATP-dependent + ATP – ''Methanothermobacter thermautotrophicus''<br /> | |||
**[[4isz]] – PhLigR RtcB + GTP + Mn<br /> | |||
**[[4dwq]], [[4it0]] – PhLigR RtcB + GMP + Mn<br /> | |||
**[[4isj]], [[4dwr]] – PhLigR RtcB + Mn<br /> | |||
**[[5cou]] – NgLigR (mutant) + ATP + Mn<br /> | |||
**[[5cov]] – NgLigR + Mn<br /> | |||
}} | |||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 20:59, 2 October 2017
RNA ligase (LigR) is an enzyme which ligates two ribonucleotide chains using ATP and producing AMP, diphosphate and the ligated ribonucleotide chain[1]. See more details in T4 RNA ligase 2 (Rnl2) and Ligases.
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3D Structures of RNA ligase3D Structures of RNA ligase
Updated on 02-October-2017
ReferencesReferences
- ↑ Nichols NM, Tabor S, McReynolds LA. RNA ligases. Curr Protoc Mol Biol. 2008 Oct;Chapter 3:Unit3.15. doi:, 10.1002/0471142727.mb0315s84. PMID:18972386 doi:http://dx.doi.org/10.1002/0471142727.mb0315s84