3wfa: Difference between revisions

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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3wfa]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WFA FirstGlance]. <br>
<table><tr><td colspan='2'>[[3wfa]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WFA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WFA FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDT:{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC+ACID'>EDT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDT:{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC+ACID'>EDT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2d73|2d73]], [[2zq0|2zq0]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2d73|2d73]], [[2zq0|2zq0]]</td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wfa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfa OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wfa RCSB], [http://www.ebi.ac.uk/pdbsum/3wfa PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wfa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wfa OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wfa RCSB], [http://www.ebi.ac.uk/pdbsum/3wfa PDBsum]</span></td></tr>
<table>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/SUSB_BACTN SUSB_BACTN]] Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation.<ref>PMID:8955399</ref> <ref>PMID:18981178</ref> 
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Hondoh, H.]]
[[Category: Hondoh, H]]
[[Category: Kimura, A.]]
[[Category: Kimura, A]]
[[Category: Mori, H.]]
[[Category: Mori, H]]
[[Category: Okuyama, M.]]
[[Category: Okuyama, M]]
[[Category: Yao, M.]]
[[Category: Yao, M]]
[[Category: Yoshida, T.]]
[[Category: Yoshida, T]]
[[Category: Calcium binding]]
[[Category: Calcium binding]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Inverting glycoside hydrolase]]
[[Category: Inverting glycoside hydrolase]]
[[Category: Tim barrel]]
[[Category: Tim barrel]]

Revision as of 17:29, 25 December 2014

Catalytic role of the calcium ion in GH97 inverting glycoside hydrolaseCatalytic role of the calcium ion in GH97 inverting glycoside hydrolase

Structural highlights

3wfa is a 2 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Resources:FirstGlance, OCA, RCSB, PDBsum

Function

[SUSB_BACTN] Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation.[1] [2]

References

  1. D'Elia JN, Salyers AA. Contribution of a neopullulanase, a pullulanase, and an alpha-glucosidase to growth of Bacteroides thetaiotaomicron on starch. J Bacteriol. 1996 Dec;178(24):7173-9. PMID:8955399
  2. Kitamura M, Okuyama M, Tanzawa F, Mori H, Kitago Y, Watanabe N, Kimura A, Tanaka I, Yao M. Structural and functional analysis of a glycoside hydrolase family 97 enzyme from Bacteroides thetaiotaomicron. J Biol Chem. 2008 Dec 26;283(52):36328-37. Epub 2008 Nov 3. PMID:18981178 doi:10.1074/jbc.M806115200

3wfa, resolution 2.00Å

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OCA