Chemotaxis protein: Difference between revisions
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===CheY=== | ===CheY=== | ||
[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]] – EcCheY (mutant) – Escherichia coli<BR /> | [[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]] – EcCheY (mutant) – ''Escherichia coli''<BR /> | ||
[[3f7n]], [[3fft]], [[3ffw]], [[3ffx]], [[3fgz]], [[3myy]], [[3olv]], [[3olw]], [[3olx]], [[3oly]] - EcCheY (mutant) + BeF3 + Mn<BR /> | [[3f7n]], [[3fft]], [[3ffw]], [[3ffx]], [[3fgz]], [[3myy]], [[3olv]], [[3olw]], [[3olx]], [[3oly]] - EcCheY (mutant) + BeF3 + Mn<BR /> | ||
[[2id7]], [[2id9]], [[2idm]] – EcCheY-phosphono (mutant) <BR /> | [[2id7]], [[2id9]], [[2idm]] – EcCheY-phosphono (mutant) <BR /> | ||
[[1djm]] – EcCheY – NMR<BR /> | [[1djm]] – EcCheY – NMR<BR /> | ||
[[1zdm]] – EcCheY + Xe<BR /> | [[1zdm]] – EcCheY + Xe<BR /> | ||
[[3gwg]] – HpCheY - Helicobacter pylori<BR /> | [[3gwg]] – HpCheY - ''Helicobacter pylori''<BR /> | ||
[[3h1f]], [[3h1g]] - HpCheY (mutant) <BR /> | [[3h1f]], [[3h1g]] - HpCheY (mutant) <BR /> | ||
[[3h1e]] - HpCheY + BeF3 + Mn<BR /> | [[3h1e]] - HpCheY + BeF3 + Mn<BR /> | ||
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[[2b1j]] - EcCheY + flagellar motor switch protein FLIM N terminal<br /> | [[2b1j]] - EcCheY + flagellar motor switch protein FLIM N terminal<br /> | ||
[[1ffg]], [[1ffs]] – EcCheY + CheA CheY-binding domain<BR /> | [[1ffg]], [[1ffs]] – EcCheY + CheA CheY-binding domain<BR /> | ||
[[1u0s]] - TmCheY response regulating domain + CheA P2 domain – Thermotoga maritima<BR /> | [[1u0s]] - TmCheY response regulating domain + CheA P2 domain –''Thermotoga maritima''<BR /> | ||
[[1ffw]] – EcCheY + CheA CheY-binding domain + imido phosphate<BR /> | [[1ffw]] – EcCheY + CheA CheY-binding domain + imido phosphate<BR /> | ||
[[1kmi]] - EcCheY + CheZ<BR /> | [[1kmi]] - EcCheY + CheZ<BR /> | ||
[[2fka]], [[2flk]], [[2flw]], [[2fmf]], [[2fmh]], [[2fmi]], [[2fmk]], [[2pl9]], [[2pmc]] – StCheY + CheZ peptide - Salmonella typhimurium<BR /> | [[2fka]], [[2flk]], [[2flw]], [[2fmf]], [[2fmh]], [[2fmi]], [[2fmk]], [[2pl9]], [[2pmc]] – StCheY + CheZ peptide - ''Salmonella typhimurium''<BR /> | ||
===CheX=== | ===CheX=== | ||
[[1xko]]– TmCheX<BR /> | [[1xko]]– TmCheX<BR /> | ||
[[3hm4]] – CheX – Desulfovibrio desulfuricans<BR /> | [[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR /> | ||
===CheC=== | ===CheC=== | ||
[[1xkr]] – TmCheC<BR /> | [[1xkr]] – TmCheC<BR /> | ||
[[2f9z]] – TmCheC + CheD<BR /> | [[2f9z]] – TmCheC + CheD<BR /> | ||
[[3qta]] – CheC – Haloarcula marismortui<BR /> | [[3qta]] – CheC – ''Haloarcula marismortui''<BR /> | ||
===CheR=== | ===CheR=== | ||
[[1bc5]] – StCheR + chemotaxis receptor peptide <BR /> | [[1bc5]] – StCheR + chemotaxis receptor peptide <BR /> | ||
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[[1i58]], [[1i59]], [[1i5a]], [[1i5b]], [[1i5d]] - TmCheA P4 domain + ATP analog<br /> | [[1i58]], [[1i59]], [[1i5a]], [[1i5b]], [[1i5d]] - TmCheA P4 domain + ATP analog<br /> | ||
[[1i5c]] - TmCheA P4 domain (mutant) + ADP<br /> | [[1i5c]] - TmCheA P4 domain (mutant) + ADP<br /> | ||
[[1tqg]] – TmCheA phosphotransferase domain | [[1tqg]] – TmCheA phosphotransferase domain<br /> | ||
[[2ld6]] – TmCheA HPT domain - NMR<BR | [[2ld6]] – TmCheA HPT domain - NMR<BR /> | ||
[[2ch4]] - TmCheA kinase and regulatory domains + CheW | [[2ch4]] - TmCheA kinase and regulatory domains + CheW | ||
===CheW=== | ===CheW=== | ||
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[[2h09]] – EcCheW - NMR<BR /> | [[2h09]] – EcCheW - NMR<BR /> | ||
===Methyl-accepting chemotaxis protein=== | ===Methyl-accepting chemotaxis protein=== | ||
[[1xbn]] – TtMche – | [[1xbn]] – TtMche – ''Thermoanaerobacter tengcongensis''<BR /> | ||
[[3eee]], [[3iqb]], [[3lah]], [[3lai]], [[3sj5]] – TtMche H-Nox domain (mutant) <BR /> | [[3eee]], [[3iqb]], [[3lah]], [[3lai]], [[3sj5]] – TtMche H-Nox domain (mutant) <BR /> | ||
[[3tf0]], [[3tf1]] - TtMche H-Nox domain<BR /> | [[3tf0]], [[3tf1]] - TtMche H-Nox domain<BR /> | ||
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[[3atp]] - EcCheI ligand-binding domain + serine<BR /> | [[3atp]] - EcCheI ligand-binding domain + serine<BR /> | ||
[[1jmw]] - StChe ligand-binding domain (mutant) <BR /> | [[1jmw]] - StChe ligand-binding domain (mutant) <BR /> | ||
[[2qhk]] – Che residues 31-203 – Vibrio parahaemolyticus<BR /> | [[2qhk]] – Che residues 31-203 – ''Vibrio parahaemolyticus''<BR /> | ||
[[3c8c]] – Che N-terminal – Vibrio cholerae<BR /> | [[3c8c]] – Che N-terminal – ''Vibrio cholerae''<BR /> | ||
[[3b47]] – Che periplasmic domain – Geobacter sulfurreducens<BR /> | [[3b47]] – Che periplasmic domain – ''Geobacter sulfurreducens''<BR /> | ||
===Flagellar motor protein FLIN=== | ===Flagellar motor protein FLIN=== | ||
[[1yab]] – TmFLIN<BR /> | [[1yab]] – TmFLIN<BR /> | ||
Revision as of 21:02, 16 January 2012
For details on chemotaxis protein see Molecular Playground/Bacterial Chemotaxis Receptors.
3D structures of chemotaxis protein3D structures of chemotaxis protein
CheYCheY
1ab6, 1d4z, 1e6m, 1e6k, 1e6l, 1jbe, 1mih, 3oo0, 3oo1 – EcCheY (mutant) – Escherichia coli
3f7n, 3fft, 3ffw, 3ffx, 3fgz, 3myy, 3olv, 3olw, 3olx, 3oly - EcCheY (mutant) + BeF3 + Mn
2id7, 2id9, 2idm – EcCheY-phosphono (mutant)
1djm – EcCheY – NMR
1zdm – EcCheY + Xe
3gwg – HpCheY - Helicobacter pylori
3h1f, 3h1g - HpCheY (mutant)
3h1e - HpCheY + BeF3 + Mn
1bdj – EcCheY + aerobic respiration control protein HPT domain
1u8t – EcCheY + flagellar motor switch protein FLIM
2b1j - EcCheY + flagellar motor switch protein FLIM N terminal
1ffg, 1ffs – EcCheY + CheA CheY-binding domain
1u0s - TmCheY response regulating domain + CheA P2 domain –Thermotoga maritima
1ffw – EcCheY + CheA CheY-binding domain + imido phosphate
1kmi - EcCheY + CheZ
2fka, 2flk, 2flw, 2fmf, 2fmh, 2fmi, 2fmk, 2pl9, 2pmc – StCheY + CheZ peptide - Salmonella typhimurium
CheXCheX
1xko– TmCheX
3hm4 – CheX – Desulfovibrio desulfuricans
CheCCheC
1xkr – TmCheC
2f9z – TmCheC + CheD
3qta – CheC – Haloarcula marismortui
CheRCheR
1bc5 – StCheR + chemotaxis receptor peptide
CheACheA
1b3q – TmCheA dimerization, kinase and regulatory domains
1i5n – StCheA P1 domain
1i58, 1i59, 1i5a, 1i5b, 1i5d - TmCheA P4 domain + ATP analog
1i5c - TmCheA P4 domain (mutant) + ADP
1tqg – TmCheA phosphotransferase domain
2ld6 – TmCheA HPT domain - NMR
2ch4 - TmCheA kinase and regulatory domains + CheW
CheWCheW
1k0s – TmCheW
2h09 – EcCheW - NMR
Methyl-accepting chemotaxis proteinMethyl-accepting chemotaxis protein
1xbn – TtMche – Thermoanaerobacter tengcongensis
3eee, 3iqb, 3lah, 3lai, 3sj5 – TtMche H-Nox domain (mutant)
3tf0, 3tf1 - TtMche H-Nox domain
3m0b - TtMche H-Nox domain Ru-porphyrin
3nvr, 3nvu – TtMche N terminal (mutant)
3g67 – TmMche
3g6b – TmMche (mutant)
2ch7 – TmMche cytoplasmic domain
1qu7, 2l9g – EcCheI cytoplasmic domain
2ld6 – EcChe peptide - NMR
3atp - EcCheI ligand-binding domain + serine
1jmw - StChe ligand-binding domain (mutant)
2qhk – Che residues 31-203 – Vibrio parahaemolyticus
3c8c – Che N-terminal – Vibrio cholerae
3b47 – Che periplasmic domain – Geobacter sulfurreducens
Flagellar motor protein FLINFlagellar motor protein FLIN
1yab – TmFLIN
Chemotaxis protein MotBChemotaxis protein MotB
3cyp, 3imp – HpMotB C terminal
3cyq – HpMotB C terminal + N-acetylmuramic acid
2zov, 2zvy, 2zvz - StMotB C terminal