Kinesin 3D Structures: Difference between revisions
Michal Harel (talk | contribs) No edit summary |
Michal Harel (talk | contribs) No edit summary |
||
Line 38: | Line 38: | ||
**[[2heh]], [[4ubf]], [[5y05]] – hKIF2C<br /> | **[[2heh]], [[4ubf]], [[5y05]] – hKIF2C<br /> | ||
**[[2gry]] – hKIF2+ADP<br /> | **[[2gry]] – hKIF2+ADP<br /> | ||
**[[6bbn]] – hKIF2A MD + Tubulin + Darpin<br /> | |||
**[[5mio]] – hKIF2C MD + Tubulin <br /> | **[[5mio]] – hKIF2C MD + Tubulin <br /> | ||
**[[1v8j]], [[5xja]], [[5xjb]] – mKIF2C MD+Mg-ADP<br /> | **[[1v8j]], [[5xja]], [[5xjb]] – mKIF2C MD+Mg-ADP<br /> | ||
Line 66: | Line 67: | ||
**[[4a14]] – hKIF7 MD <br /> | **[[4a14]] – hKIF7 MD <br /> | ||
**[[2xt3]] – hKIF7 MD (mutant)<br /> | **[[2xt3]] – hKIF7 MD (mutant)<br /> | ||
**[[6mlr]] – hKIF7 MD + Tubulin + GTP + GDP + ANP – Cryo EM<br /> | |||
**[[6mlq]] – hKIF7 MD + Tubulin + GTP + GDP + ADP – Cryo EM<br /> | |||
*KIF9 or kinesin-9 | *KIF9 or kinesin-9 | ||
Line 74: | Line 77: | ||
**[[3j2u]] – hKIF10A head domain – Cryo EM<br /> | **[[3j2u]] – hKIF10A head domain – Cryo EM<br /> | ||
**[[6b0c]] – DmKlp10A + tubulin + GTP + GDP + ANP + Mg – Cryo EM<br /> | **[[6b0c]], [[6b0l]] – DmKlp10A + tubulin + GTP + GDP + ANP + Mg – Cryo EM<br /> | ||
**[[6vpp]] – DmKlp61F + tubulin + GTP + GDP + Mg – Cryo EM<br /> | |||
**[[6vpo]] – DmKlp61F + tubulin + GTP + GDP + ANP + Mg – Cryo EM<br /> | |||
**[[6b0i]] – DmKlp10A + tubulin + GTP + GDP + ANP + Mg – Cryo EM<br /> | |||
*KIF11 or kinesin-5 | *KIF11 or kinesin-5 or Eg5 | ||
[[4b7b]] - hKIF11 (mutant) + ADP + Co + Cd <br /> | [[4b7b]] - hKIF11 (mutant) + ADP + Co + Cd <br /> | ||
[[3ken]], [[2wog]], [[2x2r]], [[2xae]], [[4bbg]] - hKIF11 +S-trityl-L-cysteine derivative + ADP + Mg<br /> | [[3ken]], [[2wog]], [[2x2r]], [[2xae]], [[4bbg]] - hKIF11 +S-trityl-L-cysteine derivative + ADP + Mg<br /> | ||
**[[3wpn]] - hKIF11 +inhibitor <br /> | **[[3wpn]] - hKIF11 +inhibitor <br /> | ||
[[2uyi]], [[2uym]], [[2gm1]], [[2pg2]], [[2fme]], [[2x7d]], [[2x7c]], [[2ieh]], [[3cjo]], [[2g1q]], [[2fl2]], [[2fl6]], [[1yrs]], [[2q2y]], [[2fky]], [[2q2z]], [[3k3b]], [[2x7e]], [[4a50]], [[4a51]], [[3zcw]] - hKIF11+inhibitor +ADP + Mg<br /> | [[2uyi]], [[2uym]], [[2gm1]], [[2pg2]], [[2fme]], [[2x7d]], [[2x7c]], [[2ieh]], [[3cjo]], [[2g1q]], [[2fl2]], [[2fl6]], [[1yrs]], [[2q2y]], [[2fky]], [[2q2z]], [[3k3b]], [[2x7e]], [[4a50]], [[4a51]], [[3zcw]], [[6g6y]], [[6g6z]], [[6hkx]], [[6hky]] - hKIF11+inhibitor +ADP + Mg<br /> | ||
[[4bxn]], [[4as7]] - hKIF11+inhibitor +ADP + Cd<br /> | [[4bxn]], [[4as7]] - hKIF11+inhibitor +ADP + Cd<br /> | ||
[[3l9h]] - hKIF11+inhibitor +ADP <br /> | [[3l9h]] - hKIF11+inhibitor +ADP <br /> | ||
Line 89: | Line 95: | ||
[[3hqd]] - hKIF11 +AMPPNP+Mg<br /> | [[3hqd]] - hKIF11 +AMPPNP+Mg<br /> | ||
[[1ii6]], [[4a1z]], [[4a28]] - hKIF11 +ADP+Mg<br /> | [[1ii6]], [[4a1z]], [[4a28]] - hKIF11 +ADP+Mg<br /> | ||
**[[4zca]] - hKIF11 (mutant) +ADP+Mg<br /> | **[[4zca]], [[6tle]], [[6trl]], [[6y1i]] - hKIF11 (mutant) +ADP+Mg<br /> | ||
[[3k5e]] - hKIF11 +ADP+enastrol + Mg<br /> | [[3k5e]] - hKIF11 +ADP+enastrol + Mg<br /> | ||
**[[6zpi]] – hKIF11 MD + tubulin + GDP + GTP + Mg – Cryo EM<br /> | **[[6zpi]] – hKIF11 MD + tubulin + GDP + GTP + Mg – Cryo EM<br /> | ||
Line 97: | Line 103: | ||
**[[6ta4]] – hKIF11 MD + tubulin + G2P + ANP + Mg – Cryo EM<br /> | **[[6ta4]] – hKIF11 MD + tubulin + G2P + ANP + Mg – Cryo EM<br /> | ||
**[[5m5i]], [[5m5l]], [[5m5m]], [[5m5n]], [[5m5o]] – KIF MD + tubulin + GDP + GTP + ANP + taxol – fission yeast – Cryo EM<br /> | **[[5m5i]], [[5m5l]], [[5m5m]], [[5m5n]], [[5m5o]] – KIF MD + tubulin + GDP + GTP + ANP + taxol – fission yeast – Cryo EM<br /> | ||
**[[5mm4]], [[5mm7]] – UmKIF + tubulin + GDP + GTP + ANP + taxol – Ustilago maydis – Cryo EM<br /> | **[[6s8m]] – fyKIFCut7 MD + tubulin + GDP + GTP + ANP – Cryo EM<br /> | ||
**[[5mm4]], [[5mm7]] – UmKIF + tubulin + GDP + GTP + ANP + taxol – ''Ustilago maydis'' – Cryo EM<br /> | |||
*KIF13A, KIF13B or kinesin-3 | *KIF13A, KIF13B or kinesin-3 | ||
Line 111: | Line 118: | ||
**[[3kin]], [[2kin]] – rKIF MD <br /> | **[[3kin]], [[2kin]] – rKIF MD <br /> | ||
**[[6a1z]] – rKIF13B<br /> | **[[6a1z]] – rKIF13B<br /> | ||
**[[6a20]] – rKIF13B (mutant)<br /> | **[[5zbs]], [[6a20]] – rKIF13B (mutant)<br /> | ||
**[[ | **[[7d8v]] – rKIF13B (mutant) + ADP<br /> | ||
**[[5zbr]] – rKIF13B + AMPPNP<br /> | **[[5zbr]] – rKIF13B + AMPPNP<br /> | ||
*KIF14 or kinesin-3 | *KIF14 or kinesin-3 | ||
**[[6wwe]], [[6wwi]], [[6wwt]] – hKIF14 MD + Tubulin + GTP + GDP – Cryo EM<br /> | |||
**[[6wwf]], [[6wwh]], [[6wwg]], [[6wwj]], [[6wwk]], [[6wwl]], [[6wwm]], [[6wwn]], [[6wwo]], [[6wwp]], [[6wwq]], [[6wwr]], [[6wws]], [[6wwu]], [[6wwv]], [[7lvr]] – mKIF14 MD + Tubulin + nucleotides – Cryo EM<br /> | |||
**[[1f9t]], [[1f9u]], [[1f9v]], [[1f9w]], [[3kar]] - yKar3 MD (mutant) – yeast<br /> | **[[1f9t]], [[1f9u]], [[1f9v]], [[1f9w]], [[3kar]] - yKar3 MD (mutant) – yeast<br /> | ||
**[[4etp]] - yKar3 MD (mutant) + VIK1<br /> | **[[4etp]] - yKar3 MD (mutant) + VIK1<br /> | ||
Line 123: | Line 132: | ||
**[[4bn2]] – hKIF15 MD<br /> | **[[4bn2]] – hKIF15 MD<br /> | ||
**[[7ryp]] – hKIF15 MD + KIF-binding protein – Cryo EM<br /> | |||
*KIF16B or kinesin-3 | *KIF16B or kinesin-3 | ||
**[[2v14]] – hKIF16B<br /> | **[[2v14]] – hKIF16B<br /> | ||
**[[6ee0]] – hKIF16B PX domain 1026-1156<br /> | |||
*KIF18A, KIF18B or kinesin-8 | *KIF18A, KIF18B or kinesin-8 | ||
Line 134: | Line 145: | ||
**[[5ocu]] - hKIF18A MD + tubulin + GTP + GDP + ANP<br /> | **[[5ocu]] - hKIF18A MD + tubulin + GTP + GDP + ANP<br /> | ||
**[[5ogc]] - hKIF18A MD + tubulin + GTP + GDP + taxol<br /> | **[[5ogc]] - hKIF18A MD + tubulin + GTP + GDP + taxol<br /> | ||
**[[7rsi]] – hKIF18A MD + KIF-binding protein + ADP – Cryo EM<br /> | |||
*KIF19A or kinesin-8 | *KIF19A or kinesin-8 | ||
Line 142: | Line 154: | ||
*KIF20A, KIF20B or kinesin-6 | *KIF20A, KIF20B or kinesin-6 | ||
**[[6yip]] – hKIF20A coiled coil domain 596-668 <br /> | |||
**[[5nd3]] – mKIF20A MD + tubulin <br /> | **[[5nd3]] – mKIF20A MD + tubulin <br /> | ||
**[[5nd2]], [[5nd4]] – mKIF20A MD + tubulin + ADP <br /> | **[[5nd2]], [[5nd4]] – mKIF20A MD + tubulin + ADP <br /> | ||
Line 151: | Line 164: | ||
**[[5d3a]] – hKIF21A coiled coil domain 938-1017 <br /> | **[[5d3a]] – hKIF21A coiled coil domain 938-1017 <br /> | ||
**[[7klj]] – hKIF21A WD-repeat domain 1324-1640 <br /> | |||
*KIF22 or kinesin-10 | *KIF22 or kinesin-10 | ||
Line 168: | Line 182: | ||
**[[1n6m]] – DmKIF MD+FNL<br /> | **[[1n6m]] – DmKIF MD+FNL<br /> | ||
**[[3l1c]] – DmNCD (mutant)<br /> | **[[3l1c]] – DmNCD (mutant)<br /> | ||
**[[1ry6]] – | **[[1ry6]] – PfKIF MD – ''Plasmodium falciparum''<br /> | ||
**[[7nba]] – PfKlF + tubulin + GTP + G2P + ANP + Mg – Cryo EM<br /> | |||
**[[7nb8]] – PfKlF + tubulin + GTP + G2P + Mg – Cryo EM<br /> | |||
**[[1goj]] – NcKIF MD<br /> | **[[1goj]] – NcKIF MD<br /> | ||
*Kinesin light chain (KLC) | *Kinesin light chain (KLC) | ||
**[[5oj8]] – hKLC1 TPR domain <br /> | **[[5oj8]], [[7ai4]], [[7aie]] – hKLC1 TPR domain <br /> | ||
3edt – hKLC2 | **[[6fuz]] – hKLC1 TPR domain + nanobody<br /> | ||
3ceq, 3nf1 – hKLC2 TPR domain | **[[3edt]] – hKLC2<br /> | ||
**[[3ceq]], [[3nf1]] – hKLC2 TPR domain<br /> | |||
**[[6f9i]] – hKLC2 + clcytenin peptide <br /> | **[[6f9i]] – hKLC2 + clcytenin peptide <br /> | ||
**[[6fv0]] – mKLC1 TPR domain + nanobody<br /> | **[[6fv0]] – mKLC1 TPR domain + nanobody<br /> | ||
**[[5ojf]] – mKLC2 TPR domain <br /> | **[[5ojf]] – mKLC2 TPR domain <br /> | ||
**[[3zfw]], [[5fjy]], [[6ejn]] - mKLC2 TPR domain + peptide<br /> | **[[3zfw]], [[5fjy]], [[6ejn]], [[6swu]] - mKLC2 TPR domain + peptide<br /> | ||
*KCBP | *KCBP | ||