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<applet load='Pdb2jd7.pdb' size='400' frame='true' align='right' scene="Ferritin/Starting_ferritin_scene/1" caption="Crystal structure of Fe-soaked ferritin from the hyperthermophilic archael anaerobe ''Pyrococcus furiousus'', [[2jd7]]" />
<applet load='Pdb2jd7.pdb' size='400' frame='true' align='right' scene="Ferritin/Starting_ferritin_scene/1" caption="Crystal structure of Fe-soaked ferritin from the hyperthermophilic archael anaerobe ''Pyrococcus furiousus'', [[2jd7]]" />


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===Ferritin===
*Ferritin
 
[[2jd6]], [[2jd7]] – PfFR - ''Pyrococcus furiosus'' <br />
[[2jd8]] – PfFR+Zn<br />
[[3kxu]] – hFR (mutant) – human<br />
[[3hx2]], [[3hx5]], [[3hx7]], [[1fha]] - hFR<br />
[[3a68]] – soFR from gene SferH4 – soybean<br />
[[3a9q]] - soFR from gene SferH4 (mutant) <br />
[[3egm]], [[3bvf]], [[3bvi]], [[3bvk]], [[3bvl]] – HpFR – ''Heliobacter pylori''<br />
[[3e6s]] - PnFR – Pseudo-nitzschia<br />
[[1z4a]], [[1vlg]] – FR – ''Thermotoga maritime''<br />
[[1s3q]], [[1sq3]], [[3kx9]] – FR – ''Archaeoglubus fulgidus''<br />
[[1krq]] – FR – ''Campylobacter jejuni''<br />
[[1eum]]  - EcFR – ''Escherichia coli''<br />
[[1qgh]] – LiFR - ''Listeria innocua''<br />
[[1mfr]], [[1bg7]], [[3ka3]], [[3ka4]], [[3rbc]], [[3re7]], [[3rgd]], [[4das]] – bFR - Bullfrog<br />
[[3ka6]], [[3ka8]], [[3ka9]] – bFR (mutant)+Co<br />
[[3se1]], [[3sh6]], [[3shx]] - bFR (mutant) + Mg<br />
[[3qz3]] - VcFR – ''Vibrio cholerae''<br / >
[[3vnx]] – FR – ''Ulva pertusa''<br />
[[4ism]], [[4isp]], [[4itt]], [[4itw]], [[4iwj]], [[4iwk]], [[4ixk]] – FR – ''Pseudo-nitschia multiseries''<br />
[[1z6o]] – FTH – ''Trichoplusia ni''<br />


===Ferritin light chain (FTL) ===
**[[2jd6]], [[2jd7]] – PfFR - ''Pyrococcus furiosus'' <br />
**[[2jd8]] – PfFR+Zn<br />
**[[3kxu]] – hFR (mutant) – human<br />
**[[3hx2]], [[3hx5]], [[3hx7]], [[1fha]] - hFR<br />
**[[3a68]] – soFR from gene SferH4 – soybean<br />
**[[3a9q]] - soFR from gene SferH4 (mutant) <br />
**[[3egm]], [[3bvf]], [[3bvi]], [[3bvk]], [[3bvl]] – HpFR – ''Heliobacter pylori''<br />
**[[3e6s]] - PnFR – Pseudo-nitzschia<br />
**[[1z4a]], [[1vlg]] – FR – ''Thermotoga maritime''<br />
**[[1s3q]], [[1sq3]], [[3kx9]] – FR – ''Archaeoglubus fulgidus''<br />
**[[1krq]] – FR – ''Campylobacter jejuni''<br />
**[[1eum]]  - EcFR – ''Escherichia coli''<br />
**[[1qgh]] – LiFR - ''Listeria innocua''<br />
**[[1mfr]], [[1bg7]], [[3ka3]], [[3ka4]], [[3rbc]], [[3re7]], [[3rgd]], [[4das]] – bFR - Bullfrog<br />
**[[3ka6]], [[3ka8]], [[3ka9]] – bFR (mutant)+Co<br />
**[[3se1]], [[3sh6]], [[3shx]] - bFR (mutant) + Mg<br />
**[[3qz3]] - VcFR – ''Vibrio cholerae''<br / >
**[[3vnx]] – FR – ''Ulva pertusa''<br />
**[[4ism]], [[4isp]], [[4itt]], [[4itw]], [[4iwj]], [[4iwk]], [[4ixk]] – FR – ''Pseudo-nitschia multiseries''<br />
**[[1z6o]] – FTH – ''Trichoplusia ni''<br />


[[1lb3]], [[1h96]] – FTL – mouse<br />
*Ferritin light chain (FTL)  
[[1rcc]], [[1rcd]], [[1rci]] – bFTL+tartrate+Mg<br />
[[1rce]], [[1rcg]] - bFTL+tartrate+Mn<br />
[[3noz]], [[3np0]], [[3np2]], [[3o7r]] – hoFTL (mutant) - horse<br />
[[3o7s]], [[3u90]] - hoFTL<br />
[[3rav]], [[3rd0]] – hoFTL + barbiturate


===Ferritin heavy chain (FTH) ===
**[[1lb3]], [[1h96]] – FTL – mouse<br />
**[[1rcc]], [[1rcd]], [[1rci]] – bFTL+tartrate+Mg<br />
**[[1rce]], [[1rcg]] - bFTL+tartrate+Mn<br />
**[[3noz]], [[3np0]], [[3np2]], [[3o7r]] – hoFTL (mutant) - horse<br />
**[[3o7s]], [[3u90]] - hoFTL<br />
**[[3rav]], [[3rd0]] – hoFTL + barbiturate


[[2z6m]], [[1r03]], [[2fha]], [[3ajo]] – hFTH<br />
*Ferritin heavy chain (FTH)  
[[3ajp]], [[3ajq]], [[4dyx]], [[4dyy]], [[4dyz]], [[4dz0]] - hFTH (mutant)<br />


===apo-ferritin (apo-FR) ===
**[[2z6m]], [[1r03]], [[2fha]], [[3ajo]] – hFTH<br />
**[[3ajp]], [[3ajq]], [[4dyx]], [[4dyy]], [[4dyz]], [[4dz0]] - hFTH (mutant)<br />


[[2x17]] – apo-PfFR+Ag <br />
*apo-ferritin (apo-FR)  
[[3h7g]] – apo-hoFR+Au <br />
[[1hrs]] - apo-hoFR+protoporphyrin<br />
[[3bve]] – apo-HpFR<br />
[[3e6r]] – apo-PnFR <br />
[[2clu]], [[2cn6]] - apo-hFR (mutant)+Zn<br />


===apo-ferritin light chain (apo-FTL) ===
**[[2x17]] – apo-PfFR+Ag <br />
**[[3h7g]] – apo-hoFR+Au <br />
**[[1hrs]] - apo-hoFR+protoporphyrin<br />
**[[3bve]] – apo-HpFR<br />
**[[3e6r]] – apo-PnFR <br />
**[[2clu]], [[2cn6]] - apo-hFR (mutant)+Zn<br />


[[2zg7]], [[2z5p]], [[2z5q]], [[2z5r]], [[3fi6]], [[3af7]] – apo-hoFTL+Pd<br />
*apo-ferritin light chain (apo-FTL)  
[[2zg8]], [[2zg9]], [[3af8]], [[3af9]]  - apo-hoFTL (mutant)+Pd<br />
[[3f33]], [[3f34]], [[3f35]], [[3f36]], [[3f37]], [[3f38]], [[3f39]] - apo-hoFTL+phenols<br />
[[2v2i]], [[2v2j]] - apo-hoFTL+haemin<br />
[[2gyd]] - apo-hoFTL+diaziflurane<br />
[[1xz1]] - apo-hoFTL+halothane<br />
[[1xz3]] - apo-hoFTL+isoflurane<br />
[[1gwg]] - apo-hoFTL+I3<br />
[[2v2l]], [[2v2m]], [[2v2n]], [[2v2o]], [[2v2p]], [[2v2r]], [[2v2s]] - apo-hoFTL (mutant)+haemin<br />
[[2za6]], [[2g4h]], [[1aew]], [[1dat]], [[1ier]], [[1ies]], [[3f32]], [[2zur]], [[2w0o]] - apo-hoFTL<br />
[[2ffx]], [[2fg4]], [[2fg8]] – apo-hFTL<br />
[[4de6]] - apo-hoFTL + arachidonic acid


===apo-ferritin heavy chain (apo-FTH) ===
**[[2zg7]], [[2z5p]], [[2z5q]], [[2z5r]], [[3fi6]], [[3af7]] – apo-hoFTL+Pd<br />
**[[2zg8]], [[2zg9]], [[3af8]], [[3af9]]  - apo-hoFTL (mutant)+Pd<br />
**[[3f33]], [[3f34]], [[3f35]], [[3f36]], [[3f37]], [[3f38]], [[3f39]] - apo-hoFTL+phenols<br />
**[[2v2i]], [[2v2j]] - apo-hoFTL+haemin<br />
**[[2gyd]] - apo-hoFTL+diaziflurane<br />
**[[1xz1]] - apo-hoFTL+halothane<br />
**[[1xz3]] - apo-hoFTL+isoflurane<br />
**[[1gwg]] - apo-hoFTL+I3<br />
**[[2v2l]], [[2v2m]], [[2v2n]], [[2v2o]], [[2v2p]], [[2v2r]], [[2v2s]] - apo-hoFTL (mutant)+haemin<br />
**[[2za6]], [[2g4h]], [[1aew]], [[1dat]], [[1ier]], [[1ies]], [[3f32]], [[2zur]], [[2w0o]] - apo-hoFTL<br />
**[[2ffx]], [[2fg4]], [[2fg8]] – apo-hFTL<br />
**[[4de6]] - apo-hoFTL + arachidonic acid


[[2za7]], [[2za8]], [[2cn7]], [[2chi]], [[2clu]] - apo-hoFTH (mutant) <br />
*apo-ferritin heavy chain (apo-FTH)  
[[2cei]], [[2cih]], [[2cn6]], [[2iu2]] - apo-hoFTH (mutant)+Zn<br />
[[3erz]] – apo-hFR+Hg<br />
[[3es3]] - apo-hFR+Au<br />


===Bacterioferritin (BFR) ===
**[[2za7]], [[2za8]], [[2cn7]], [[2chi]], [[2clu]] - apo-hoFTH (mutant) <br />
**[[2cei]], [[2cih]], [[2cn6]], [[2iu2]] - apo-hoFTH (mutant)+Zn<br />
**[[3erz]] – apo-hFR+Hg<br />
**[[3es3]] - apo-hFR+Au<br />


[[3gvy]] – BFR – ''Rhodobacter sphaeroides''<br />
*Bacterioferritin (BFR)  
[[1jgc]] - BFR – ''Rhodobacter capsulatus''<br />
[[1ji4]] – BFR – ''Helicobacter pylori''<br />
[[1nf4]], [[1nf6]], [[1nfv]] – BFR – ''Desulfovibrio desulfuricans''<br />
[[3fvb]] – BmBFR - ''Brucelia melitensis''<br />
[[2fkz]], [[2fl0]], [[1sof]] – BFR – ''Azotobacrter vinelandii''<br />
[[2wtl]], [[3qb9]], [[3uof]], [[3uoi]] – BFR – ''Mycobacterium tuberculosis''<br />
[[3bkn]] - MsBFR – ''Mycobacterium smegmatis''<br />
[[3is7]], [[3is8]], [[3ise]], [[3isf]], [[3r2h]], [[3r2k]], [[3r2l]], [[3r2m]], [[3r2o]], [[3r2r]], [[3r2s]] – BFR – ''Pseudomonas aeruginosa''<br />
[[1bfr]], [[1bcf]], [[2htn]], [[2vxi]], [[3e1j]], [[3e1l]], [[3e1m]], [[3e1n]], [[3e1p]], [[3e1o]], [[3e1q]], [[2y3q]]  – EcBFR <br />
[[3e2c]], [[3ghq]] – EcBFR (mutant)<br />
[[4am2]], [[4am4]], [[4am5]] – BFR – ''Blastochloris viridis''


===Thioferritin (TFR) ===
**[[3gvy]] – BFR – ''Rhodobacter sphaeroides''<br />
**[[1jgc]] - BFR – ''Rhodobacter capsulatus''<br />
**[[1ji4]] – BFR – ''Helicobacter pylori''<br />
**[[1nf4]], [[1nf6]], [[1nfv]] – BFR – ''Desulfovibrio desulfuricans''<br />
**[[3fvb]] – BmBFR - ''Brucelia melitensis''<br />
**[[2fkz]], [[2fl0]], [[1sof]] – BFR – ''Azotobacrter vinelandii''<br />
**[[2wtl]], [[3qb9]], [[3uof]], [[3uoi]] – BFR – ''Mycobacterium tuberculosis''<br />
**[[3bkn]] - MsBFR – ''Mycobacterium smegmatis''<br />
**[[3is7]], [[3is8]], [[3ise]], [[3isf]], [[3r2h]], [[3r2k]], [[3r2l]], [[3r2m]], [[3r2o]], [[3r2r]], [[3r2s]] – BFR – ''Pseudomonas aeruginosa''<br />
**[[1bfr]], [[1bcf]], [[2htn]], [[2vxi]], [[3e1j]], [[3e1l]], [[3e1m]], [[3e1n]], [[3e1p]], [[3e1o]], [[3e1q]], [[2y3q]]  – EcBFR <br />
**[[3e2c]], [[3ghq]] – EcBFR (mutant)<br />
**[[4am2]], [[4am4]], [[4am5]] – BFR – ''Blastochloris viridis''


[[2vzb]] – TFR – ''Bacterioides fragilis''
*Thioferritin (TFR)


===DNA-binding Protein of Starved cells (Dps) ===
**[[2vzb]] – TFR – ''Bacterioides fragilis''


[[3iq1]] – VcDps <br />
*DNA-binding Protein of Starved cells (Dps)  
[[3ge4]] – BmDps <br />
[[2iy4]] – Dps – ''Listeria monocytogenes''<br />
[[2bkc]], [[2bk6]], [[2bjy]] – LiDps (mutant) <br />
[[2f7n]] – Dps – ''Deinococcus radiodurans''<br />
[[1tjo]], [[1tk6]], [[1tkp]], [[1tko]], [[1moj]] – Dps – ''Halobacterium salinarum''<br />
[[1o9r]] – Dps – ''Agrobacterium tumefaciens''<br />
[[1dps]], [[1f30]], [[1f33]], [[1jre]] – EcDps <br />
[[1jts]], [[1l8h]], [[1l8i]] – EcDps (mutant)<br />
[[2ux1]], [[2v15]], [[2xjm]], [[2xjn]], [[2xjo]], [[2xkq]] – Dps – ''Streptococcus suis''<br />
[[2yw6]] – MsDps<br />
[[3ak8]], [[3ak9]] – Dps – ''Salmonella enterica''<br />
[[1n1q]] – Dps – ''Brevibacillus brevis''<br />
[[1vei]], [[1vel]], [[1veq]], [[2yw7]] – MsDps<br />
[[4dyu]] – Dpo – ''Yersinia pestis''


===MrgA===
**[[3iq1]] – VcDps <br />
**[[3ge4]] – BmDps <br />
**[[2iy4]] – Dps – ''Listeria monocytogenes''<br />
**[[2bkc]], [[2bk6]], [[2bjy]] – LiDps (mutant) <br />
**[[2f7n]] – Dps – ''Deinococcus radiodurans''<br />
**[[1tjo]], [[1tk6]], [[1tkp]], [[1tko]], [[1moj]] – Dps – ''Halobacterium salinarum''<br />
**[[1o9r]] – Dps – ''Agrobacterium tumefaciens''<br />
**[[1dps]], [[1f30]], [[1f33]], [[1jre]] – EcDps <br />
**[[1jts]], [[1l8h]], [[1l8i]] – EcDps (mutant)<br />
**[[2ux1]], [[2v15]], [[2xjm]], [[2xjn]], [[2xjo]], [[2xkq]] – Dps – ''Streptococcus suis''<br />
**[[2yw6]] – MsDps<br />
**[[3ak8]], [[3ak9]] – Dps – ''Salmonella enterica''<br />
**[[1n1q]] – Dps – ''Brevibacillus brevis''<br />
**[[1vei]], [[1vel]], [[1veq]], [[2yw7]] – MsDps<br />
**[[4dyu]] – Dpo – ''Yersinia pestis''


[[2chp]] – MrgA – ''Bacillus subtilis''<br />
*MrgA


**[[2chp]] – MrgA – ''Bacillus subtilis''<br />
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 10:27, 25 November 2014

Crystal structure of Fe-soaked ferritin from the hyperthermophilic archael anaerobe Pyrococcus furiousus, 2jd7

Drag the structure with the mouse to rotate

Ferritin (FR) is an iron storage and release protein. It stores iron as microcrystals with phosphate and hydroxide ions. FR is composed of 24 subunits of heavy chain (FTH) and light chain (FTL).

  • Bacterioferritin (BFR) structure is very similar to FR. It contains a binuclear iron center and haem. It stores iron as ferric oxide mineral in its hollow central cavity.
  • Thioferritin (TFR) is a ferritin-related protein with 2 cysteine residues adjacent to the dimetal binding site.
  • Another iron storing protein is the DNA-binding Protein of Starved cells (Dps) - a ferritin-like diiron carboxylate.
  • MrgA – another iron storage protein - belongs to the Dps family.

3D Structures of Ferritin3D Structures of Ferritin

Updated on 25-November-2014

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

David Canner, Eran Hodis, Alexander Berchansky, Michal Harel, Joel L. Sussman