Transcription initiation factor: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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 *  '''TFIID''' recognizes the promoter sequence on the DNA.<br />
 *  '''TFIIF''' binds RNA polymerase III prohibiting it to bind to DNA outside the promoter.
+</StructureSection>
 ==3D structures of transcription initiation factors==
 Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
+{{#tree:id=OrganizedByTopic|openlevels=0|
-===TFIIA===
+*TFIIA
-[[1ytf]], [[1nh2]], [[1rm1]] – yTFIIA + TBP + DNA – yeast<br />
+**[[1ytf]], [[1nh2]], [[1rm1]] – yTFIIA + TBP + DNA – yeast<br />
-[[1nvp]] – hTFIIA + TATA-binding protein + DNA – human<br />
+**[[1nvp]] – hTFIIA + TATA-binding protein + DNA – human<br />
-===TFIIB===
+*TFIIB
-[[1pft]] – TFIIB N terminal – ''Pyrococcus furiosus'' – NMR<BR />
+**[[1pft]] – TFIIB N terminal – ''Pyrococcus furiosus'' – NMR<BR />
-[[1tfb]] – hTFIIB - NMR<BR />
+**[[1tfb]] – hTFIIB - NMR<BR />
-[[1dl6]] - hTFIIB N terminal – NMR<br />
+**[[1dl6]] - hTFIIB N terminal – NMR<br />
-[[1rly]] - hTFIIB Zn ribbon domain + Zn – NMR<br />
+**[[1rly]] - hTFIIB Zn ribbon domain + Zn – NMR<br />
-[[1ro4]] - hTFIIB Zn ribbon domain – NMR<br />
+**[[1ro4]] - hTFIIB Zn ribbon domain – NMR<br />
-[[1vol]], [[1c9b]]  – hTFIIB + TBP + DNA<BR />
+**[[1vol]], [[1c9b]]  – hTFIIB + TBP + DNA<BR />
-[[3k1f]], [[3k7a]], [[4bbr]], [[4bbs]] – yTFIIB + RNA polymerase II<br />
+**[[3k1f]], [[3k7a]], [[4bbr]], [[4bbs]] – yTFIIB + RNA polymerase II<br />
-[[1ais]], [[1d3u]] - TFIIB C terminal + TBP + DNA – ''Pyrococcus woesei''
+**[[1ais]], [[1d3u]] - TFIIB C terminal + TBP + DNA – ''Pyrococcus woesei''
-===TFIID===
+*TFIID
-[[1bh8]] – hTFIID<BR />
+**[[1bh8]] – hTFIID<BR />
-[[1eqf]] – hTFIID subunit 1<br />
+**[[1eqf]] – hTFIID subunit 1<br />
-[[3uv5]], [[3uv4]] – hTFIID subunit 1 bromodomain <br />
+**[[3uv5]], [[3uv4]] – hTFIID subunit 1 bromodomain <br />
-[[3aad]] – hTFIID subunit 1 bromodomain + histone chaperone ASF1A<br />
+**[[3aad]] – hTFIID subunit 1 bromodomain + histone chaperone ASF1A<br />
-[[1tba]] – TFIID – ''Drosophila melanogaster'' - NMR<BR />
+**[[1tba]] – TFIID – ''Drosophila melanogaster'' - NMR<BR />
-[[1bh9]] – hTFIID + PCMBS<BR />
+**[[1bh9]] – hTFIID + PCMBS<BR />
-[[1qn3]], [[1qn4]], [[1qn5]], [[1qn6]], [[1qn7]], [[1qn8]], [[1qn9]], [[1qna]], [[1qnb]], [[1qnc]], [[1qne]] – TFIID + DNA – ''Arabidopsis thaliana''
+**[[1qn3]], [[1qn4]], [[1qn5]], [[1qn6]], [[1qn7]], [[1qn8]], [[1qn9]], [[1qna]], [[1qnb]], [[1qnc]], [[1qne]] – TFIID + DNA – ''Arabidopsis thaliana''
-'''TFIIE'''
+*TFIIE
-[[1vd4]] - hTFIIB Zn finger domain – NMR<br />
+**[[1vd4]] - hTFIIB Zn finger domain – NMR<br />
-[[2rnq]] – hTFIIE C terminal - NMR<br />
+**[[2rnq]] – hTFIIE C terminal - NMR<br />
-[[2rnr]] – hTFIIE C terminal + TFIIH PH domain- NMR<br />
+**[[2rnr]] – hTFIIE C terminal + TFIIH PH domain- NMR<br />
-'''TFIIF'''
+*TFIIF
-[[1f3u]] – hTFIIF<br />
+**[[1f3u]] – hTFIIF<br />
-[[1nha]] – hTFIIF C terminal - NMR<br />
+**[[1nha]] – hTFIIF C terminal - NMR<br />
-[[1i27]] – hTFIIF C terminal (mutant)<br />
+**[[1i27]] – hTFIIF C terminal (mutant)<br />
-[[1j2x]] – hTFIIF C terminal + RNA polymerase CTD phosphatase peptide<br />
+**[[1j2x]] – hTFIIF C terminal + RNA polymerase CTD phosphatase peptide<br />
-[[1onv]] – hTFIIF C terminal + serine phosphatase peptide - NMR<br />
+**[[1onv]] – hTFIIF C terminal + serine phosphatase peptide - NMR<br />
-[[2k7l]] – hTFIIF C terminal + FCP1 peptide - NMR<br />
+**[[2k7l]] – hTFIIF C terminal + FCP1 peptide - NMR<br />
+}}
-</StructureSection>
 [[Category:Topic Page]]