4exw: Difference between revisions
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4exw]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_geothermalis_dsm_11300 Deinococcus geothermalis dsm 11300]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3kdv 3kdv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EXW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EXW FirstGlance]. <br> | <table><tr><td colspan='2'>[[4exw]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_geothermalis_dsm_11300 Deinococcus geothermalis dsm 11300]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3kdv 3kdv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EXW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EXW FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ddrB, Dgeo_0295 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=319795 Deinococcus geothermalis DSM 11300])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ddrB, Dgeo_0295 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=319795 Deinococcus geothermalis DSM 11300])</td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4exw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4exw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4exw RCSB], [http://www.ebi.ac.uk/pdbsum/4exw PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4exw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4exw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4exw RCSB], [http://www.ebi.ac.uk/pdbsum/4exw PDBsum]</span></td></tr> | ||
<table> | </table> | ||
== Function == | |||
[[http://www.uniprot.org/uniprot/DDRB_DEIGD DDRB_DEIGD]] ssDNA-binding protein that probably contributes to the ionizing radiation resistance of D.geothermalis. Plays a role in DNA repair and genome reconstitution, in a RecA-independent process, and is necessary for recovery from severe genomic fragmentation as a result of exposure to severe levels of ionizing radiation (Probable). Binds single-stranded DNA but not duplex DNA. | |||
==See Also== | ==See Also== | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Deinococcus geothermalis dsm 11300]] | [[Category: Deinococcus geothermalis dsm 11300]] | ||
[[Category: Junop, M S | [[Category: Junop, M S]] | ||
[[Category: Sugiman-Marangos, S | [[Category: Sugiman-Marangos, S]] | ||
[[Category: Anti-parallel beta-barrel]] | [[Category: Anti-parallel beta-barrel]] | ||
[[Category: Dna annealing]] | [[Category: Dna annealing]] | ||
Revision as of 00:03, 26 December 2014
The structure of DdrB from Deinococcus: a new fold for single-stranded DNA binding proteins.The structure of DdrB from Deinococcus: a new fold for single-stranded DNA binding proteins.
Structural highlights
Function[DDRB_DEIGD] ssDNA-binding protein that probably contributes to the ionizing radiation resistance of D.geothermalis. Plays a role in DNA repair and genome reconstitution, in a RecA-independent process, and is necessary for recovery from severe genomic fragmentation as a result of exposure to severe levels of ionizing radiation (Probable). Binds single-stranded DNA but not duplex DNA. See Also |
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