2qtf: Difference between revisions

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New page: '''Unreleased structure''' The entry 2qtf is ON HOLD until Paper Publication Authors: Wu, H., Sun, L., Brouns, S.J., Fu, S., Rao, Z., Van der Oost, J. Description: Crystal structure of...
 
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'''Unreleased structure'''


The entry 2qtf is ON HOLD  until Paper Publication
==Crystal structure of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricus==
<StructureSection load='2qtf' size='340' side='right'caption='[[2qtf]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2qtf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QTF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QTF FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qtf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qtf OCA], [https://pdbe.org/2qtf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qtf RCSB], [https://www.ebi.ac.uk/pdbsum/2qtf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qtf ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/HFLX_SACS2 HFLX_SACS2] GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Specific for GTP.[HAMAP-Rule:MF_00900]<ref>PMID:19787775</ref> <ref>PMID:21478358</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qt/2qtf_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qtf ConSurf].
<div style="clear:both"></div>


Authors: Wu, H., Sun, L., Brouns, S.J., Fu, S., Rao, Z., Van der Oost, J.
==See Also==
 
*[[GTP-binding protein 3D structures|GTP-binding protein 3D structures]]
Description: Crystal structure of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricus
== References ==
 
<references/>
 
__TOC__
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 11 08:38:39 2008''
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharolobus solfataricus P2]]
[[Category: Brouns SJ]]
[[Category: Fu S]]
[[Category: Rao Z]]
[[Category: Sun L]]
[[Category: Van der Oost J]]
[[Category: Wu H]]

Latest revision as of 12:17, 21 February 2024

Crystal structure of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricusCrystal structure of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricus

Structural highlights

2qtf is a 1 chain structure with sequence from Saccharolobus solfataricus P2. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

HFLX_SACS2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Specific for GTP.[HAMAP-Rule:MF_00900][1] [2]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

References

  1. ↑ Wu H, Sun L, Blombach F, Brouns SJ, Snijders AP, Lorenzen K, van den Heuvel RH, Heck AJ, Fu S, Li X, Zhang XC, Rao Z, van der Oost J. Structure of the ribosome associating GTPase HflX. Proteins. 2010 Feb 15;78(3):705-13. doi: 10.1002/prot.22599. PMID:19787775 doi:http://dx.doi.org/10.1002/prot.22599
  2. ↑ Blombach F, Launay H, Zorraquino V, Swarts DC, Cabrita LD, Benelli D, Christodoulou J, Londei P, van der Oost J. An HflX-type GTPase from Sulfolobus solfataricus binds to the 50S ribosomal subunit in all nucleotide-bound states. J Bacteriol. 2011 Jun;193(11):2861-7. doi: 10.1128/JB.01552-10. Epub 2011 Apr 8. PMID:21478358 doi:http://dx.doi.org/10.1128/JB.01552-10

2qtf, resolution 2.00Å

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