Dehalogenase 3D structures: Difference between revisions
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**[[6a41]] – RbHLD – ''Rhodobacteraceae'' <br /> | **[[6a41]] – RbHLD – ''Rhodobacteraceae'' <br /> | ||
**[[4c6h]] – RbHLD + hexanol <br /> | **[[4c6h]] – RbHLD + hexanol <br /> | ||
**[[3u1t]] – HLD DmmA – marine <br /> | **[[3u1t]] – HLD DmmA – marine <br /> | ||
**[[2had]], [[1ede]], [[2pky]], [[2yxp]], [[1edb]] – XaHLD – ''Xanthobacter autotrophicus'' <br /> | **[[2had]], [[1ede]], [[2pky]], [[2yxp]], [[1edb]] – XaHLD – ''Xanthobacter autotrophicus'' <br /> | ||
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**[[3wib]] – AtHLD DatA (mutant) <br /> | **[[3wib]] – AtHLD DatA (mutant) <br /> | ||
**[[2xt0]] – HLD DppA – ''Plesiocystis pacifica'' <br /> | **[[2xt0]] – HLD DppA – ''Plesiocystis pacifica'' <br /> | ||
**[[7pw1]] – HLD – synthetic<br /> | |||
*Haloalkane dehalogenase from ''Rhodococcus rhodochrous'' DhaA | *Haloalkane dehalogenase from ''Rhodococcus rhodochrous'' DhaA | ||
**[[ | **[[1bn6]], [[1bn7]], [[4kaf]], [[4kaa]], [[4kac]] – RrHLD – ''Rhodococcus rhodochrous''<br /> | ||
**[[ | **[[2v9z]], [[5flk]], [[5y2x]], [[6sp5]], [[6xtc]], [[7o3o]], [[7o8b]] – RrHLD (mutant) <br /> | ||
**[[4e46]] – RrHLD + propanol <br /> | |||
**[[6zcc]], [[7ond]], [[7oo4]] – RrHLD + flurophore<br /> | |||
**[[4fwb]] – RrHLD DhaA (mutant) + trichloropropane<br /> | **[[4fwb]] – RrHLD DhaA (mutant) + trichloropropane<br /> | ||
**[[7pcw]], [[7pcx]] – RrHLD DhaA (mutant) + chloroalkane derivative<br /> | |||
**[[7wam]], [[7wan]] – RrHLD DhaA (mutant) + quinoline derivative<br /> | |||
*Haloalkane dehalogenase from ''Sphingomonas paucimobolis'' LinB | *Haloalkane dehalogenase from ''Sphingomonas paucimobolis'' LinB | ||
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**[[1g42]] – SpHLD LinB + trichloropropane<br /> | **[[1g42]] – SpHLD LinB + trichloropropane<br /> | ||
**[[1g5f]] – SpHLD LinB + trichloroethane<br /> | **[[1g5f]] – SpHLD LinB + trichloroethane<br /> | ||
**[[7nfz]] – HLD LinB (mutant) – ''Sphingomonas japonicum''<br /> | |||
*Haloalkane dehalogenase complex with halogen | *Haloalkane dehalogenase complex with halogen | ||
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**[[1b6g]] – XaHLD + Cl <br /> | **[[1b6g]] – XaHLD + Cl <br /> | ||
**[[1cij]] – XaHLD + Br <br /> | **[[1cij]] – XaHLD + Br <br /> | ||
**[[4hzg]], [[5uy1]] – RrHLD + Cl<br /> | |||
**[[3rk4]], [[3fbw]], [[3fwh]], [[3g9x]], [[3sk0]], [[4f5z]], [[4wcv]], [[6xt8]] – RrHLD (mutant) + Cl<br /> | |||
**[[1cqw]] – RrHLD + I<br /> | **[[1cqw]] – RrHLD + I<br /> | ||
**[[5uxz]], [[5y2y]], [[5vnp]] | **[[5uxz]], [[5y2y]], [[5vnp]], [[6y7b]] – RrHLD + Cl + fluorogenic ligand<br /> | ||
**[[4f60]] – RrHLD (mutant) + F<br /> | **[[4f60]] – RrHLD (mutant) + F<br /> | ||
**[[4brz]] – RbHLD + Cl <br /> | **[[4brz]] – RbHLD + Cl <br /> | ||
**[[4k2a]] – BeHLD DbeA + Cl – ''Bradyrhizobium elkanii''<br /> | **[[4k2a]], [[6xy9]] – BeHLD DbeA + Cl – ''Bradyrhizobium elkanii''<br /> | ||
**[[6s42]] – BeHLD (mutant) + Cl + I<br /> | **[[6s42]] – BeHLD (mutant) + Cl + I<br /> | ||
**[[3a2m]], [[3a2n]], [[3afi]] – BjHLD DbjA + Cl – ''Bradyrhizobium japonicum''<br /> | **[[3a2m]], [[3a2n]], [[3afi]] – BjHLD DbjA + Cl – ''Bradyrhizobium japonicum''<br /> | ||
**[[6s06]] – HLD (mutant) + Cl – ''Sphingobium japonicum''<br /> | |||
**[[3a2l]] – BjHLD DbjA (mutant) + Cl <br /> | **[[3a2l]] – BjHLD DbjA (mutant) + Cl <br /> | ||
**[[5esr]] – HLD DccA + Cl – ''Caulobacter crescentus''<br /> | **[[5esr]] – HLD DccA + Cl – ''Caulobacter crescentus''<br /> | ||
**[[6f9o]] – HLD + Cl – ''Psychrobacter cryohalolentis''<br /> | **[[6f9o]] – HLD + Cl – ''Psychrobacter cryohalolentis''<br /> | ||
**[[7avr]] – HLD DpaA + Cl – ''Paraglaciecola agarilytica''<br /> | |||
*Fluoroacetate dehalogenase (FDH) | *Fluoroacetate dehalogenase (FDH) | ||
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**[[1zmo]] – HHDH – ''Anthrobacter''<br /> | **[[1zmo]] – HHDH – ''Anthrobacter''<br /> | ||
**[[3zn2]] – AtHHDH <br /> | **[[3zn2]] – AtHHDH <br /> | ||
**[[7wkq]] – HHDH – ''Acidimicrobila bacterium'' <br /> | |||
*''Halohydrin dehalogenase complexes'' | *''Halohydrin dehalogenase complexes'' | ||
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**[[5kvc]] – RrHHDH (mutant) + imidazole + Cl<br /> | **[[5kvc]] – RrHHDH (mutant) + imidazole + Cl<br /> | ||
*L-2-haloacid dehalogenase (LHDH) | *L-2-haloacid dehalogenase (LHDH) or (S)-2-haloacid dehalogenase | ||
**[[1jud]] – PsLHDH – ''Pseudomonas''<br /> | **[[1jud]] – PsLHDH – ''Pseudomonas''<br /> | ||
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**[[3um9]] – LHDH – ''Polaromonas'' <br /> | **[[3um9]] – LHDH – ''Polaromonas'' <br /> | ||
**[[3umg]] – LHDH – ''Rhodococcus jostii'' <br /> | **[[3umg]] – LHDH – ''Rhodococcus jostii'' <br /> | ||
**[[2no4]] – BcLHDH IVA – ''Burkholderia cepacia''<br /> | |||
**[[7arp]] – ZgLHDH – ''Zobellia galactanivorans''<br /> | |||
**[[7asz]] – ZgLHDH (mutant)<br /> | |||
*''L-2-haloacid dehalogenase complexes'' | *''L-2-haloacid dehalogenase complexes'' | ||
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**[[1qq6]], [[1qq7]] – XaLHDH + aspartate carboxymethyl ester + Cl<br /> | **[[1qq6]], [[1qq7]] – XaLHDH + aspartate carboxymethyl ester + Cl<br /> | ||
**[[2yn4]] – RhLHDH + chlorobutyrate<br /> | **[[2yn4]] – RhLHDH + chlorobutyrate<br /> | ||
**[[2no5]] – BcLHDH IVA + 2-monochloroprapanate<br /> | |||
*R-2-haloacid dehalogenase (RHDH) | *R-2-haloacid dehalogenase (RHDH) | ||
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**[[4n2x]] – MeDLHDH – ''Methylobacterium''<br /> | **[[4n2x]] – MeDLHDH – ''Methylobacterium''<br /> | ||
**[[3wj8]] – MeDLHDH + bromo-methylpropionate <br /> | **[[3wj8]] – MeDLHDH + bromo-methylpropionate <br /> | ||
*Iodotyrosine dehalogenase (ITDH) | *Iodotyrosine dehalogenase (ITDH) | ||