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==Solution structure of PDZ domain of mouse Alpha-actinin-2 associated LIM protein==
==Solution structure of PDZ domain of mouse Alpha-actinin-2 associated LIM protein==
<StructureSection load='1v5l' size='340' side='right' caption='[[1v5l]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='1v5l' size='340' side='right'caption='[[1v5l]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1v5l]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V5L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1V5L FirstGlance]. <br>
<table><tr><td colspan='2'>[[1v5l]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V5L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V5L FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA 6720456D19 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v5l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v5l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1v5l RCSB], [http://www.ebi.ac.uk/pdbsum/1v5l PDBsum], [http://www.topsan.org/Proteins/RSGI/1v5l TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v5l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v5l OCA], [https://pdbe.org/1v5l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v5l RCSB], [https://www.ebi.ac.uk/pdbsum/1v5l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v5l ProSAT], [https://www.topsan.org/Proteins/RSGI/1v5l TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PDLI3_MOUSE PDLI3_MOUSE] May play a role in the organization of actin filament arrays within muscle cells (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v5/1v5l_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v5/1v5l_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v5l ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Group:MUZIC:ALP|MUZIC:ALP]]
*[[PDZ and LIM domain protein|PDZ and LIM domain protein]]
*[[PDZ and LIM domain protein|PDZ and LIM domain protein]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Inoue, M]]
[[Category: Inoue M]]
[[Category: Kigawa, T]]
[[Category: Kigawa T]]
[[Category: Koshiba, S]]
[[Category: Koshiba S]]
[[Category: Structural genomic]]
[[Category: Tochio N]]
[[Category: Tochio, N]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S]]
[[Category: Actin binding]]
[[Category: Cytoskeleton]]
[[Category: Pdz domain]]
[[Category: Rsgi]]
[[Category: Structural protein]]

Latest revision as of 02:57, 28 December 2023

Solution structure of PDZ domain of mouse Alpha-actinin-2 associated LIM proteinSolution structure of PDZ domain of mouse Alpha-actinin-2 associated LIM protein

Structural highlights

1v5l is a 1 chain structure with sequence from Mus musculus. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

PDLI3_MOUSE May play a role in the organization of actin filament arrays within muscle cells (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

Drag the structure with the mouse to rotate

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