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==Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM== | ==Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM== | ||
<StructureSection load='2rdx' size='340' side='right' caption='[[2rdx]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='2rdx' size='340' side='right'caption='[[2rdx]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2rdx]] is a 8 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2rdx]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ISM Roseovarius nubinhibens ISM]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qye 2qye]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RDX FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rdx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rdx OCA], [https://pdbe.org/2rdx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rdx RCSB], [https://www.ebi.ac.uk/pdbsum/2rdx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rdx ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/A3SNF8_ROSNI A3SNF8_ROSNI] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rd/2rdx_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rd/2rdx_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rdx ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Mandelate racemase|Mandelate racemase]] | *[[Mandelate racemase|Mandelate racemase]] | ||
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]] | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Roseovarius nubinhibens]] | [[Category: Large Structures]] | ||
[[Category: Almo | [[Category: Roseovarius nubinhibens ISM]] | ||
[[Category: Bonanno | [[Category: Almo SC]] | ||
[[Category: Burley | [[Category: Bonanno J]] | ||
[[Category: Gerlt | [[Category: Burley SK]] | ||
[[Category: Gheyi | [[Category: Gerlt JA]] | ||
[[Category: Gilmore | [[Category: Gheyi T]] | ||
[[Category: Koss | [[Category: Gilmore M]] | ||
[[Category: Lau | [[Category: Koss J]] | ||
[[Category: Maletic | [[Category: Lau C]] | ||
[[Category: Maletic M]] | |||
[[Category: Ozyurt | [[Category: Ozyurt S]] | ||
[[Category: Patskovsky | [[Category: Patskovsky Y]] | ||
[[Category: Sauder | [[Category: Sauder JM]] | ||
[[Category: Wasserman | [[Category: Wasserman SR]] | ||
Latest revision as of 12:21, 21 February 2024
Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISMCrystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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