2csx: Difference between revisions

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[[Image:2csx.gif|left|200px]]<br /><applet load="2csx" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2csx, resolution 2.70&Aring;" />
'''Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met)'''<br />


==About this Structure==
==Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met)==
2CSX is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Active as [http://en.wikipedia.org/wiki/Methionine--tRNA_ligase Methionine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.10 6.1.1.10] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CSX OCA].  
<StructureSection load='2csx' size='340' side='right'caption='[[2csx]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2csx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CSX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CSX FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2csx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2csx OCA], [https://pdbe.org/2csx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2csx RCSB], [https://www.ebi.ac.uk/pdbsum/2csx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2csx ProSAT], [https://www.topsan.org/Proteins/RSGI/2csx TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SYM_AQUAE SYM_AQUAE] Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cs/2csx_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2csx ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
*[[Transfer RNA (tRNA)|Transfer RNA (tRNA)]]
__TOC__
</StructureSection>
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
[[Category: Methionine--tRNA ligase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Fukai S]]
[[Category: Fukai, S.]]
[[Category: Nakama T]]
[[Category: Nakama, T.]]
[[Category: Nakanishi K]]
[[Category: Nakanishi, K.]]
[[Category: Nureki O]]
[[Category: Nureki, O.]]
[[Category: Ogiso Y]]
[[Category: Ogiso, Y.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: ligase]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomics]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:52:06 2008''

Latest revision as of 16:43, 13 March 2024

Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met)Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met)

Structural highlights

2csx is a 4 chain structure with sequence from Aquifex aeolicus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.7Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

SYM_AQUAE Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2csx, resolution 2.70Å

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