2qdd: Difference between revisions

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New page: left|200px<br /><applet load="2qdd" size="350" color="white" frame="true" align="right" spinBox="true" caption="2qdd, resolution 2.30Å" /> '''Crystal structure of...
 
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[[Image:2qdd.gif|left|200px]]<br /><applet load="2qdd" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2qdd, resolution 2.30&Aring;" />
'''Crystal structure of a member of enolase superfamily from Roseovarius nubinhibens ISM'''<br />


==About this Structure==
==Crystal structure of a member of enolase superfamily from Roseovarius nubinhibens ISM==
2QDD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ism Roseovarius nubinhibens ism] with <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDD OCA].  
<StructureSection load='2qdd' size='340' side='right'caption='[[2qdd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
[[Category: Roseovarius nubinhibens ism]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2qdd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ISM Roseovarius nubinhibens ISM]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QDD FirstGlance]. <br>
[[Category: Almo, S.C.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
[[Category: Bonanno, J.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
[[Category: Burley, S.K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qdd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qdd OCA], [https://pdbe.org/2qdd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qdd RCSB], [https://www.ebi.ac.uk/pdbsum/2qdd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qdd ProSAT]</span></td></tr>
[[Category: Gerlt, J.]]
</table>
[[Category: Gheyi, T.]]
== Function ==
[[Category: Gilmore, J.M.]]
[https://www.uniprot.org/uniprot/A3SNF7_ROSNI A3SNF7_ROSNI]  
[[Category: Groshong, C.]]
== Evolutionary Conservation ==
[[Category: Iizuka, M.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Koss, J.]]
Check<jmol>
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
  <jmolCheckbox>
[[Category: Patskovsky, Y.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qd/2qdd_consurf.spt"</scriptWhenChecked>
[[Category: Sauder, J.M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Sojitra, S.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Wasserman, S.R.]]
  </jmolCheckbox>
[[Category: GOL]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qdd ConSurf].
[[Category: enolase]]
<div style="clear:both"></div>
[[Category: new york structural genomics research consortium]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgrc]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: racemase]]
[[Category: structural genomics]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 14:46:08 2008''
==See Also==
*[[Enolase 3D structures|Enolase 3D structures]]
*[[Mandelate racemase|Mandelate racemase]]
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Roseovarius nubinhibens ISM]]
[[Category: Almo SC]]
[[Category: Bonanno J]]
[[Category: Burley SK]]
[[Category: Gerlt J]]
[[Category: Gheyi T]]
[[Category: Gilmore JM]]
[[Category: Groshong C]]
[[Category: Iizuka M]]
[[Category: Koss J]]
[[Category: Patskovsky Y]]
[[Category: Sauder JM]]
[[Category: Sojitra S]]
[[Category: Wasserman SR]]

Latest revision as of 12:15, 21 February 2024

Crystal structure of a member of enolase superfamily from Roseovarius nubinhibens ISMCrystal structure of a member of enolase superfamily from Roseovarius nubinhibens ISM

Structural highlights

2qdd is a 2 chain structure with sequence from Roseovarius nubinhibens ISM. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A3SNF7_ROSNI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2qdd, resolution 2.30Å

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