8fx7: Difference between revisions

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'''Unreleased structure'''


The entry 8fx7 is ON HOLD  until Paper Publication
==Non-ribosomal PCP-C didomain (ester stabilised leucine) acceptor bound state==
<StructureSection load='8fx7' size='340' side='right'caption='[[8fx7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[8fx7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermobifida_fusca_YX Thermobifida fusca YX]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8FX7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8FX7 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=YCT:2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl+(2~{S})-2-azanyl-4-methyl-pentanoate'>YCT</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8fx7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8fx7 OCA], [https://pdbe.org/8fx7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8fx7 RCSB], [https://www.ebi.ac.uk/pdbsum/8fx7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8fx7 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q47NR9_THEFY Q47NR9_THEFY]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Nonribosomal peptide synthetases produce many important peptide natural products and are centred around carrier proteins (CPs) that deliver intermediates to various catalytic domains. We show that the replacement of CP substrate thioesters by stabilised ester analogues leads to active condensation domain complexes, whereas amide stabilisation generates non-functional complexes.


Authors:  
Not always an innocent bystander: the impact of stabilised phosphopantetheine moieties when studying nonribosomal peptide biosynthesis.,Ho YTC, Kaczmarski JA, Tailhades J, Izore T, Steer DL, Schittenhelm RB, Tosin M, Jackson CJ, Cryle MJ Chem Commun (Camb). 2023 Jun 29;59(53):8234-8237. doi: 10.1039/d3cc01578e. PMID:37310188<ref>PMID:37310188</ref>


Description:  
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
<div class="pdbe-citations 8fx7" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermobifida fusca YX]]
[[Category: Cryle MJ]]
[[Category: Ho YTC]]

Latest revision as of 10:16, 21 November 2024

Non-ribosomal PCP-C didomain (ester stabilised leucine) acceptor bound stateNon-ribosomal PCP-C didomain (ester stabilised leucine) acceptor bound state

Structural highlights

8fx7 is a 2 chain structure with sequence from Thermobifida fusca YX. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q47NR9_THEFY

Publication Abstract from PubMed

Nonribosomal peptide synthetases produce many important peptide natural products and are centred around carrier proteins (CPs) that deliver intermediates to various catalytic domains. We show that the replacement of CP substrate thioesters by stabilised ester analogues leads to active condensation domain complexes, whereas amide stabilisation generates non-functional complexes.

Not always an innocent bystander: the impact of stabilised phosphopantetheine moieties when studying nonribosomal peptide biosynthesis.,Ho YTC, Kaczmarski JA, Tailhades J, Izore T, Steer DL, Schittenhelm RB, Tosin M, Jackson CJ, Cryle MJ Chem Commun (Camb). 2023 Jun 29;59(53):8234-8237. doi: 10.1039/d3cc01578e. PMID:37310188[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Ho YTC, Kaczmarski JA, Tailhades J, Izoré T, Steer DL, Schittenhelm RB, Tosin M, Jackson CJ, Cryle MJ. Not always an innocent bystander: the impact of stabilised phosphopantetheine moieties when studying nonribosomal peptide biosynthesis. Chem Commun (Camb). 2023 Jun 29;59(53):8234-8237. PMID:37310188 doi:10.1039/d3cc01578e

8fx7, resolution 2.20Å

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