Argonaute 3D structures: Difference between revisions
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*Argonaute 1 | *Argonaute 1 | ||
**[[1si2]], [[1si3]] – hAGO1 PAZ domain + RNA - human<br /> | **[[1si2]], [[1si3]] – hAGO1 PAZ domain + RNA - human<br /> | ||
**[[4kre]], [[4krf]], [[4kxt]] - hAGO1 + RNA <br /> | **[[4kre]], [[4krf]], [[4kxt]] - hAGO1 + RNA <br /> | ||
**[[5w6v]] - hAGO1 + RNA + protein GW1<br /> | **[[5w6v]] - hAGO1 + RNA + protein GW1<br /> | ||
**[[1r4k]] – DmAGO1 PAZ domain – ''Drosophila melanogaster''<br /> | |||
**[[4g0p]], [[4g0x]], [[3vna]] – AtAGO1 MID domain – ''Arabidopsis thaliana''<br /> | **[[4g0p]], [[4g0x]], [[3vna]] – AtAGO1 MID domain – ''Arabidopsis thaliana''<br /> | ||
**[[3vnb]] – AtAGO1 MID domain (mutant)<br /> | **[[3vnb]] – AtAGO1 MID domain (mutant)<br /> | ||
**[[4g0q]], [[4g0y]], [[4g0z]] – AtAGO1 MID domain + nucleotide<br /> | **[[4g0q]], [[4g0y]], [[4g0z]] – AtAGO1 MID domain + nucleotide<br /> | ||
**[[8r3z]] - AGO1 + RNA – ''Candidatus harpoatesius'' – Cryo EM<br /> | |||
*Argonaute 2 | *Argonaute 2; Domains – PAZ 227-352; MID 439-575 | ||
**[[3luc]], [[3luk]] – hAGO2 MID domain <br /> | |||
**[[3lud]], [[3lug]], [[3luh]], [[3luj]], [[3qx8]], [[3qx9]], [[7c6b]], [[7d7u]], [[9bf0]], [[9bf2]] – hAGO2 MID domain + nucleotide<br /> | |||
**[[9bez]] – hAGO2 MID domain + RNA<br /> | |||
**[[8thq]] – hAGO2 PAZ domain + RNA <br /> | |||
**[[4f3t]], [[4ola]], [[4olb]], [[4w5o]], [[5ki6]], [[5t7b]], [[6ra4]], [[8d6j]], [[8d71]] – hAGO2 + RNA <br /> | |||
**[[4w5n]], [[4w5q]], [[4w5r]], [[4w5t]], [[4z4i]], [[4z4h]], [[4z4g]], [[4z4f]], [[4z4e]], [[4z4d]], [[4z4c]], [[4ola]], [[5js1]], [[5js2]], [[5wea]], [[6cbd]], [[6mdz]], [[6mfn]], [[6mfr]], [[6n4o]], [[6nit]] – hAGO2 (mutant) + RNA <br /> | |||
**[[4olb]] - hAGO2 (mutant) + RNA + tryptophan<br /> | |||
**[[4f3t]], [[4w5o]], [[5t7b]] – hAGO2 + RNA <br /> | |||
**[[7ki3]] – hAGO2 + RNA + Hepatitis C RNA<br /> | |||
**[[1r6z]] – DmAGO2 PAZ domain/MBP <br /> | **[[1r6z]] – DmAGO2 PAZ domain/MBP <br /> | ||
**[[1vyn]] – DmAGO2 PAZ domain - NMR <br /> | **[[1vyn]] – DmAGO2 PAZ domain - NMR <br /> | ||
**[[1t2r]], [[1t2s]] – DmAGO2 PAZ domain + RNA - NMR<br /> | **[[1t2r]], [[1t2s]] – DmAGO2 PAZ domain + RNA - NMR<br /> | ||
**[[3mj0]] – DmAGO2 PAZ domain + RNA <br /> | **[[3mj0]] – DmAGO2 PAZ domain + RNA <br /> | ||
**[[4g0m]], [[4g0o]] – AtAGO2 MID domain <br /> | **[[4g0m]], [[4g0o]] – AtAGO2 MID domain <br /> | ||
*Argonaute 3 | *Argonaute 3 | ||
**[[5vm9]] – hAGO3 + RNA <br /> | **[[5vm9]], [[8vaj]] – hAGO3 + RNA <br /> | ||
*Argonaute 4 | |||
**[[6oon]] – hAGO4 + RNA <br /> | |||
*Argonaute 10 | |||
**[[7sva]], [[7swf]], [[7swq]] – AtAGO10 + RNA – Cryo EM<br /> | |||
*Argonaute | *Argonaute | ||
**[[1u04]], [[1z25]], [[1z26]] – | **[[1u04]], [[1z25]], [[1z26]] – PfAGO (mutant) – ''Pyrococcus furiosus'' <br /> | ||
**[[8jpx]] – PfAGO + DNA – Cryo EM<br /> | |||
**[[2f8s]], [[2f8t]] – AaAGO + RNA – ''Aquifex aeolicus''<br /> | **[[2f8s]], [[2f8t]] – AaAGO + RNA – ''Aquifex aeolicus''<br /> | ||
**[[2f8t]], [[2nub]] – AaAGO <br /> | **[[2f8t]], [[2nub]] – AaAGO <br /> | ||
**[[3da5]] – | **[[3da5]] – TtAGO – ''Thermococcus thioreducens''<br /> | ||
**[[8jsi]], [[8wd8]] – TtAGO + DNA – Cryo EM<br /> | |||
**[[8j84]], [[8u7b]] – AGO + TIR-APAZ – ''Thermoflavidium thermophilus''<br /> | |||
**[[8qlo]] – AGO + TIR-APAZ – ''Bacillales bacterium''<br /> | |||
**[[3dlb]], [[3dlh]], [[3f73]], [[3hm9]], [[3hvr]], [[3hxm]], [[4n41]], [[4n47]], [[4n76]], [[4nca]], [[4ncb]], [[5gq9]] – TtAGO + DNA – ''Thermus thermophilus''<br /> | **[[3dlb]], [[3dlh]], [[3f73]], [[3hm9]], [[3hvr]], [[3hxm]], [[4n41]], [[4n47]], [[4n76]], [[4nca]], [[4ncb]], [[5gq9]] – TtAGO + DNA – ''Thermus thermophilus''<br /> | ||
**[[3hjf]], [[3hk2]], [[3ho1]] – TtAGO (mutant) + DNA <br /> | **[[3hjf]], [[3hk2]], [[3ho1]] – TtAGO (mutant) + DNA <br /> | ||
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**[[5g5s]] – MjAGO – ''Methanocaldococcus jannaschii''<br /> | **[[5g5s]] – MjAGO – ''Methanocaldococcus jannaschii''<br /> | ||
**[[5g5t]] – MjAGO + DNA <br /> | **[[5g5t]] – MjAGO + DNA <br /> | ||
**[[6qzk]] – AGO (mutant) + DNA – ''Clostridium butyricum''<br /> | |||
**[[7r8f]], [[7r8k]] – PlAGO – ''Pseudooceanicola lipolyticus''<br /> | |||
**[[7r8g]], [[7r8h]], [[7r8i]], [[7r8j]] – PlAGO + DNA <br /> | |||
**[[8ok9]] – AGO + AGO-N + DNA – ''Archaeoglobus fulgidus''<br /> | |||
}} | }} | ||
[[Category: Topic Page]] | [[Category: Topic Page]] | ||