Argonaute 3D structures

3D Structures of Argonaute3D Structures of Argonaute

Updated on 11-November-2024

{"openlevels":0}

• Argonaute 1
  • 1si2, 1si3 – hAGO1 PAZ domain + RNA - human
    
  • 4kre, 4krf, 4kxt - hAGO1 + RNA
    
  • 5w6v - hAGO1 + RNA + protein GW1
    
  • 1r4k – DmAGO1 PAZ domain – Drosophila melanogaster
    
  • 4g0p, 4g0x, 3vna – AtAGO1 MID domain – Arabidopsis thaliana
    
  • 3vnb – AtAGO1 MID domain (mutant)
    
  • 4g0q, 4g0y, 4g0z – AtAGO1 MID domain + nucleotide
    
  • 8r3z - AGO1 + RNA – Candidatus harpoatesius – Cryo EM
    
• Argonaute 2; Domains – PAZ 227-352; MID 439-575
  • 3luc, 3luk – hAGO2 MID domain
    
  • 3lud, 3lug, 3luh, 3luj, 3qx8, 3qx9, 7c6b, 7d7u, 9bf0, 9bf2 – hAGO2 MID domain + nucleotide
    
  • 9bez – hAGO2 MID domain + RNA
    
  • 8thq – hAGO2 PAZ domain + RNA
    
  • 4f3t, 4ola, 4olb, 4w5o, 5ki6, 5t7b, 6ra4, 8d6j, 8d71 – hAGO2 + RNA
    
  • 4w5n, 4w5q, 4w5r, 4w5t, 4z4i, 4z4h, 4z4g, 4z4f, 4z4e, 4z4d, 4z4c, 4ola, 5js1, 5js2, 5wea, 6cbd, 6mdz, 6mfn, 6mfr, 6n4o, 6nit – hAGO2 (mutant) + RNA
    
  • 4olb - hAGO2 (mutant) + RNA + tryptophan
    
  • 4f3t, 4w5o, 5t7b – hAGO2 + RNA
    
  • 7ki3 – hAGO2 + RNA + Hepatitis C RNA
    
  • 1r6z – DmAGO2 PAZ domain/MBP
    
  • 1vyn – DmAGO2 PAZ domain - NMR
    
  • 1t2r, 1t2s – DmAGO2 PAZ domain + RNA - NMR
    
  • 3mj0 – DmAGO2 PAZ domain + RNA
    
  • 4g0m, 4g0o – AtAGO2 MID domain
    
• Argonaute 3
  • 5vm9, 8vaj – hAGO3 + RNA
    
• Argonaute 4
  • 6oon – hAGO4 + RNA
    
• Argonaute 10
  • 7sva, 7swf, 7swq – AtAGO10 + RNA – Cryo EM
    
• Argonaute
  • 1u04, 1z25, 1z26 – PfAGO (mutant) – Pyrococcus furiosus
    
  • 8jpx – PfAGO + DNA – Cryo EM
    
  • 2f8s, 2f8t – AaAGO + RNA – Aquifex aeolicus
    
  • 2f8t, 2nub – AaAGO
    
  • 3da5 – TtAGO – Thermococcus thioreducens
    
  • 8jsi, 8wd8 – TtAGO + DNA – Cryo EM
    
  • 8j84, 8u7b – AGO + TIR-APAZ – Thermoflavidium thermophilus
    
  • 8qlo – AGO + TIR-APAZ – Bacillales bacterium
    
  • 3dlb, 3dlh, 3f73, 3hm9, 3hvr, 3hxm, 4n41, 4n47, 4n76, 4nca, 4ncb, 5gq9 – TtAGO + DNA – Thermus thermophilus
    
  • 3hjf, 3hk2, 3ho1 – TtAGO (mutant) + DNA
    
  • 5i4a – MpAGO + RNA – Marinitoga piezophila
    
  • 5ux0 – MpAGO (mutant) + RNA + DNA
    
  • 5g5s – MjAGO – Methanocaldococcus jannaschii
    
  • 5g5t – MjAGO + DNA
    
  • 6qzk – AGO (mutant) + DNA – Clostridium butyricum
    
  • 7r8f, 7r8k – PlAGO – Pseudooceanicola lipolyticus
    
  • 7r8g, 7r8h, 7r8i, 7r8j – PlAGO + DNA
    
  • 8ok9 – AGO + AGO-N + DNA – Archaeoglobus fulgidus