6c13: Difference between revisions

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<SX load='6c13' size='340' side='right' viewer='molstar' caption='[[6c13]], [[Resolution|resolution]] 11.33&Aring;' scene=''>
<SX load='6c13' size='340' side='right' viewer='molstar' caption='[[6c13]], [[Resolution|resolution]] 11.33&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6c13]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6C13 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6C13 FirstGlance]. <br>
<table><tr><td colspan='2'>[[6c13]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6C13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6C13 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 11.33&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Pcdh15 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6c13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6c13 OCA], [http://pdbe.org/6c13 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6c13 RCSB], [http://www.ebi.ac.uk/pdbsum/6c13 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6c13 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6c13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6c13 OCA], [https://pdbe.org/6c13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6c13 RCSB], [https://www.ebi.ac.uk/pdbsum/6c13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6c13 ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
[[http://www.uniprot.org/uniprot/PCD15_MOUSE PCD15_MOUSE]] Defects in Pcdh15 are the cause of the Ames waltzer (av) phenotype. It is characterized by deafness and a balance disorder, associated with the degeneration of inner ear neuroepithelia.  
[https://www.uniprot.org/uniprot/PCD15_MOUSE PCD15_MOUSE] Defects in Pcdh15 are the cause of the Ames waltzer (av) phenotype. It is characterized by deafness and a balance disorder, associated with the degeneration of inner ear neuroepithelia.
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/PCD15_MOUSE PCD15_MOUSE]] Calcium-dependent cell-adhesion protein. Required for inner ear neuroepithelial cell elaboration and cochlear function. Probably involved in the maintenance of normal retinal function.  
[https://www.uniprot.org/uniprot/PCD15_MOUSE PCD15_MOUSE] Calcium-dependent cell-adhesion protein. Required for inner ear neuroepithelial cell elaboration and cochlear function. Probably involved in the maintenance of normal retinal function.
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== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
<div class="pdbe-citations 6c13" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6c13" style="background-color:#fffaf0;"></div>
==See Also==
*[[Cadherin 3D structures|Cadherin 3D structures]]
== References ==
== References ==
<references/>
<references/>
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[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Lk3 transgenic mice]]
[[Category: Mus musculus]]
[[Category: Elferich, J]]
[[Category: Elferich J]]
[[Category: Ge, J]]
[[Category: Ge J]]
[[Category: Gouaux, E]]
[[Category: Gouaux E]]
[[Category: Hair cell]]
[[Category: Hearing]]
[[Category: Lhfpl5]]
[[Category: Membrane protein]]
[[Category: Pcdh15]]
[[Category: Protocadherin]]
[[Category: Tip link]]
[[Category: Tmh]]

Latest revision as of 10:51, 17 October 2024

CryoEM structure of mouse PCDH15-4EC-LHFPL5 complexCryoEM structure of mouse PCDH15-4EC-LHFPL5 complex

6c13, resolution 11.33Å

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