3t1v: Difference between revisions

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==MglA bound to GDP in P2(1) tetrameric arrangement==
==MglA bound to GDP in P2(1) tetrameric arrangement==
<StructureSection load='3t1v' size='340' side='right' caption='[[3t1v]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='3t1v' size='340' side='right'caption='[[3t1v]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3t1v]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T1V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3T1V FirstGlance]. <br>
<table><tr><td colspan='2'>[[3t1v]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T1V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3T1V FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3t1o|3t1o]], [[3t1q|3t1q]], [[3t1r|3t1r]], [[3t1s|3t1s]], [[3t12|3t12]], [[3t1t|3t1t]], [[3t1x|3t1x]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3t1v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t1v OCA], [https://pdbe.org/3t1v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3t1v RCSB], [https://www.ebi.ac.uk/pdbsum/3t1v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3t1v ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TTHA1132 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Small_monomeric_GTPase Small monomeric GTPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.5.2 3.6.5.2] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3t1v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t1v OCA], [http://pdbe.org/3t1v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3t1v RCSB], [http://www.ebi.ac.uk/pdbsum/3t1v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3t1v ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5SJ82_THET8 Q5SJ82_THET8]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 3t1v" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3t1v" style="background-color:#fffaf0;"></div>
==See Also==
*[[Gliding protein|Gliding protein]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Small monomeric GTPase]]
[[Category: Large Structures]]
[[Category: Thet8]]
[[Category: Thermus thermophilus HB8]]
[[Category: Koerner, C]]
[[Category: Koerner C]]
[[Category: Miertzschke, M]]
[[Category: Miertzschke M]]
[[Category: Vetter, I R]]
[[Category: Vetter IR]]
[[Category: Wittinghofer, A]]
[[Category: Wittinghofer A]]
[[Category: Alpha/beta protein]]
[[Category: Bacterial gtpase]]
[[Category: Bacterial polarity]]
[[Category: G domain containing protein]]
[[Category: Hydrolase]]
[[Category: Motility]]
[[Category: Pole localisation]]

Latest revision as of 12:42, 30 October 2024

MglA bound to GDP in P2(1) tetrameric arrangementMglA bound to GDP in P2(1) tetrameric arrangement

Structural highlights

3t1v is a 4 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q5SJ82_THET8

Publication Abstract from PubMed

The bacterium Myxococcus xanthus uses a G protein cycle to dynamically regulate the leading/lagging pole polarity axis. The G protein MglA is regulated by its GTPase-activating protein (GAP) MglB, thus resembling Ras family proteins. Here, we show structurally and biochemically that MglA undergoes a dramatic, GDP-GTP-dependent conformational change involving a screw-type forward movement of the central beta2-strand, never observed in any other G protein. This movement and complex formation with MglB repositions the conserved residues Arg53 and Gln82 into the active site. Residues required for catalysis are thus not provided by the GAP MglB, but by MglA itself. MglB is a Roadblock/LC7 protein and functions as a dimer to stimulate GTP hydrolysis in a 2:1 complex with MglA. In vivo analyses demonstrate that hydrolysis mutants abrogate Myxococcus' ability to regulate its polarity axis changing the reversal behaviour from stochastic to oscillatory and that both MglA GTPase activity and MglB GAP catalysis are essential for maintaining a proper polarity axis.

Structural analysis of the Ras-like G protein MglA and its cognate GAP MglB and implications for bacterial polarity.,Miertzschke M, Koerner C, Vetter IR, Keilberg D, Hot E, Leonardy S, Sogaard-Andersen L, Wittinghofer A EMBO J. 2011 Aug 16. doi: 10.1038/emboj.2011.291. PMID:21847100[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Miertzschke M, Koerner C, Vetter IR, Keilberg D, Hot E, Leonardy S, Sogaard-Andersen L, Wittinghofer A. Structural analysis of the Ras-like G protein MglA and its cognate GAP MglB and implications for bacterial polarity. EMBO J. 2011 Aug 16. doi: 10.1038/emboj.2011.291. PMID:21847100 doi:10.1038/emboj.2011.291

3t1v, resolution 2.40Å

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OCA