2ktc: Difference between revisions
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The | ==Solution Structure of a Novel hKv1.1 inhibiting scorpion toxin from Mesibuthus tamulus== | ||
<StructureSection load='2ktc' size='340' side='right'caption='[[2ktc]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2ktc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesobuthus_tamulus Mesobuthus tamulus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KTC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KTC FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ktc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ktc OCA], [https://pdbe.org/2ktc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ktc RCSB], [https://www.ebi.ac.uk/pdbsum/2ktc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ktc ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/KAX94_HOTTA KAX94_HOTTA] Blocker of human voltage-gated potassium channel Kv1.1/KCNA1 (PubMed:12650917).<ref>PMID:12650917</ref> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
The three dimensional structure of a 32 residue three disulfide scorpion toxin, BTK-2, from the Indian red scorpion Mesobuthus tamulus has been determined using isotope edited solution NMR methods. Samples for structural and electrophysiological studies were prepared using recombinant DNA methods. Electrophysiological studies show that the peptide is active against hK(v)1.1 channels. The structure of BTK-2 was determined using 373 distance restraints from NOE data, 66 dihedral angle restraints from NOE, chemical shift and scalar coupling data, 6 constraints based on disulfide linkages and 8 constraints based on hydrogen bonds. The root mean square deviation (r.m.s.d) about the averaged co-ordinates of the backbone (N, C(alpha), C') and all heavy atoms are 0.81 +/- 0.23A and 1.51 +/- 0.29A respectively. The backbone dihedral angles (varphi and psi) for all residues occupy the favorable and allowed regions of the Ramachandran map. The three dimensional structure of BTK-2 is composed of three well defined secondary structural regions that constitute the alpha-beta-beta structural motif. Comparisons between the structure of BTK-2 and other closely related scorpion toxins pointed towards distinct differences in surface properties that provide insights into the structure-function relationships among this important class of voltage-gated potassium channel inhibiting peptides. | |||
Solution structure of BTK-2, a novel hK(v)1.1 inhibiting scorpion toxin, from the eastern Indian scorpion Mesobuthus tamulus.,Kumar GS, Upadhyay S, Mathew MK, Sarma SP Biochim Biophys Acta. 2011 Apr;1814(4):459-69. doi: 10.1016/j.bbapap.2011.01.006., Epub 2011 Jan 21. PMID:21256986<ref>PMID:21256986</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 2ktc" style="background-color:#fffaf0;"></div> | |||
==See Also== | |||
*[[Potassium channel toxin 3D structures|Potassium channel toxin 3D structures]] | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Mesobuthus tamulus]] | |||
[[Category: Kumar GS]] | |||
[[Category: Mathew MK]] | |||
[[Category: Sarma SP]] | |||
[[Category: Upadhyay S]] | |||