3h5o: Difference between revisions

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{{Seed}}
[[Image:3h5o.png|left|200px]]


<!--
==The crystal structure of transcription regulator GntR from Chromobacterium violaceum==
The line below this paragraph, containing "STRUCTURE_3h5o", creates the "Structure Box" on the page.
<StructureSection load='3h5o' size='340' side='right'caption='[[3h5o]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H5O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H5O FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3h5o|  PDB=3h5o |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h5o OCA], [https://pdbe.org/3h5o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h5o RCSB], [https://www.ebi.ac.uk/pdbsum/3h5o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h5o ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3h5o TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/3h5o_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h5o ConSurf].
<div style="clear:both"></div>


===The crystal structure of transcription regulator GntR from Chromobacterium violaceum===
==See Also==
 
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3H5O is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H5O OCA].
[[Category: Large Structures]]
[[Category: Chromobacterium violaceum]]
[[Category: Burley SK]]
[[Category: Burley, S K.]]
[[Category: Swaminathan S]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Zhang Z]]
[[Category: Swaminathan, S.]]
[[Category: Zhang, Z.]]
[[Category: 11234b]]
[[Category: Chromobacterium violaceum]]
[[Category: Dna-binding]]
[[Category: Gntr]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Sgx]]
[[Category: Structural genomic]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun  3 08:45:23 2009''

Latest revision as of 09:16, 27 November 2024

The crystal structure of transcription regulator GntR from Chromobacterium violaceumThe crystal structure of transcription regulator GntR from Chromobacterium violaceum

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3h5o, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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