3e6m: Difference between revisions

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<StructureSection load='3e6m' size='340' side='right'caption='[[3e6m]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='3e6m' size='340' side='right'caption='[[3e6m]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3e6m]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_700808 Atcc 700808]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E6M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E6M FirstGlance]. <br>
<table><tr><td colspan='2'>[[3e6m]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E6M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E6M FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPOA0451 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89184 ATCC 700808])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e6m OCA], [https://pdbe.org/3e6m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e6m RCSB], [https://www.ebi.ac.uk/pdbsum/3e6m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e6m ProSAT], [https://www.topsan.org/Proteins/MCSG/3e6m TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e6m OCA], [https://pdbe.org/3e6m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e6m RCSB], [https://www.ebi.ac.uk/pdbsum/3e6m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e6m ProSAT], [https://www.topsan.org/Proteins/MCSG/3e6m TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5LLB9_RUEPO Q5LLB9_RUEPO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e6/3e6m_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e6/3e6m_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 700808]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Freeman, L]]
[[Category: Ruegeria pomeroyi]]
[[Category: Joachimiak, A]]
[[Category: Freeman L]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Tan, K]]
[[Category: Tan K]]
[[Category: Volkart, L]]
[[Category: Volkart L]]
[[Category: Apc88769]]
[[Category: Dna-binding]]
[[Category: Marr]]
[[Category: Mcsg]]
[[Category: Plasmid]]
[[Category: PSI, Protein structure initiative]]
[[Category: Silicibacter pomeroyi dss]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]

Latest revision as of 08:46, 17 October 2024

The crystal structure of a MarR family transcriptional regulator from Silicibacter pomeroyi DSS.The crystal structure of a MarR family transcriptional regulator from Silicibacter pomeroyi DSS.

Structural highlights

3e6m is a 8 chain structure with sequence from Ruegeria pomeroyi. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5LLB9_RUEPO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3e6m, resolution 2.20Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA