2lcq: Difference between revisions

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==Solution structure of the endonuclease Nob1 from P.horikoshii==
The line below this paragraph, containing "STRUCTURE_2lcq", creates the "Structure Box" on the page.
<StructureSection load='2lcq' size='340' side='right'caption='[[2lcq]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2lcq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LCQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LCQ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2lcq|  PDB=2lcq  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lcq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lcq OCA], [https://pdbe.org/2lcq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lcq RCSB], [https://www.ebi.ac.uk/pdbsum/2lcq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lcq ProSAT]</span></td></tr>
 
</table>
===Solution structure of the endonuclease Nob1 from P.horikoshii===
== Function ==
 
[https://www.uniprot.org/uniprot/NOB1_PYRHO NOB1_PYRHO] Toxic component of a toxin-antitoxin (TA) module (Potential). Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end.<ref>PMID:22156373</ref>
 
== References ==
==About this Structure==
<references/>
[[2lcq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LCQ OCA].  
__TOC__
[[Category: Pyrococcus horikoshii]]
</StructureSection>
[[Category: Bohnsack, M T.]]
[[Category: Large Structures]]
[[Category: Duchardt-Ferner, E.]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Hennig, R.]]
[[Category: Bohnsack MT]]
[[Category: Martin, R.]]
[[Category: Duchardt-Ferner E]]
[[Category: Mirus, O.]]
[[Category: Hennig R]]
[[Category: Safferthal, C.]]
[[Category: Martin R]]
[[Category: Schleiff, E.]]
[[Category: Mirus O]]
[[Category: Veith, T.]]
[[Category: Safferthal C]]
[[Category: Weis, B.]]
[[Category: Schleiff E]]
[[Category: Woehnert, J.]]
[[Category: Veith T]]
[[Category: Wurm, J P.]]
[[Category: Weis B]]
[[Category: Metal binding protein]]
[[Category: Woehnert J]]
[[Category: Pin domain]]
[[Category: Wurm JP]]
[[Category: Ribosome biogenesis]]
[[Category: Zn ribbon domain]]

Latest revision as of 09:55, 1 May 2024

Solution structure of the endonuclease Nob1 from P.horikoshiiSolution structure of the endonuclease Nob1 from P.horikoshii

Structural highlights

2lcq is a 1 chain structure with sequence from Pyrococcus horikoshii OT3. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NOB1_PYRHO Toxic component of a toxin-antitoxin (TA) module (Potential). Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end.[1]

References

  1. ↑ Veith T, Martin R, Wurm JP, Weis BL, Duchardt-Ferner E, Safferthal C, Hennig R, Mirus O, Bohnsack MT, Wohnert J, Schleiff E. Structural and functional analysis of the archaeal endonuclease Nob1. Nucleic Acids Res. 2012 Apr 1;40(7):3259-74. Epub 2011 Dec 10. PMID:22156373 doi:10.1093/nar/gkr1186
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