2kj3: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2kj3.jpg|left|200px]]


<!--
==High-resolution structure of the HET-s(218-289) prion in its amyloid form obtained by solid-state NMR==
The line below this paragraph, containing "STRUCTURE_2kj3", creates the "Structure Box" on the page.
<StructureSection load='2kj3' size='340' side='right'caption='[[2kj3]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2kj3]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Podospora_anserina Podospora anserina]. The September 2015 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Amyloids''  by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2015_9 10.2210/rcsb_pdb/mom_2015_9]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KJ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KJ3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solid-state NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kj3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kj3 OCA], [https://pdbe.org/2kj3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kj3 RCSB], [https://www.ebi.ac.uk/pdbsum/2kj3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kj3 ProSAT]</span></td></tr>
{{STRUCTURE_2kj3|  PDB=2kj3  |  SCENE=  }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/HETS_PODAS HETS_PODAS] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>  


===High-resolution structure of the HET-s(218-289) prion in its amyloid form obtained by solid-state NMR===
==See Also==
 
*[[Prion 3D structures|Prion 3D structures]]
 
== References ==
==About this Structure==
<references/>
2KJ3 is a 3 chains structure with sequences from [http://en.wikipedia.org/wiki/Podospora_anserina Podospora anserina]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KJ3 OCA].
__TOC__
 
</StructureSection>
==Reference==
[[Category: Amyloids]]
<ref group="xtra">PMID:18339938</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Podospora anserina]]
[[Category: Podospora anserina]]
[[Category: Ab, E.]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Lange, A.]]
[[Category: AB E]]
[[Category: Loquet, A.]]
[[Category: Lange A]]
[[Category: Meier, B H.]]
[[Category: Loquet A]]
[[Category: Melckebeke, H Van.]]
[[Category: Meier BH]]
[[Category: Wasmer, C.]]
[[Category: Van Melckebeke H]]
[[Category: Amyloid fibril]]
[[Category: Wasmer C]]
[[Category: Asparagine ladder]]
[[Category: Beta-helix]]
[[Category: Beta-solenoid]]
[[Category: Hydrophobic core]]
[[Category: Parallel beta-sheet]]
[[Category: Prion]]
[[Category: Protein fibril]]
[[Category: Salt bridge]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun  2 08:36:25 2010''

Latest revision as of 09:46, 1 May 2024

High-resolution structure of the HET-s(218-289) prion in its amyloid form obtained by solid-state NMRHigh-resolution structure of the HET-s(218-289) prion in its amyloid form obtained by solid-state NMR

Structural highlights

2kj3 is a 3 chain structure with sequence from Podospora anserina. The September 2015 RCSB PDB Molecule of the Month feature on Amyloids by David Goodsell is 10.2210/rcsb_pdb/mom_2015_9. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solid-state NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

HETS_PODAS Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.[1] [2] [3]

See Also

References

  1. ↑ Turcq B, Deleu C, Denayrolles M, Begueret J. Two allelic genes responsible for vegetative incompatibility in the fungus Podospora anserina are not essential for cell viability. Mol Gen Genet. 1991 Aug;228(1-2):265-9. PMID:1886611
  2. ↑ Deleu C, Clave C, Begueret J. A single amino acid difference is sufficient to elicit vegetative incompatibility in the fungus Podospora anserina. Genetics. 1993 Sep;135(1):45-52. PMID:8224826
  3. ↑ Coustou V, Deleu C, Saupe S, Begueret J. The protein product of the het-s heterokaryon incompatibility gene of the fungus Podospora anserina behaves as a prion analog. Proc Natl Acad Sci U S A. 1997 Sep 2;94(18):9773-8. PMID:9275200
Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2kj3&oldid=4135830"