5yiy: Difference between revisions

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'''Unreleased structure'''


The entry 5yiy is ON HOLD  until Jan 12 2020
==Crystal structure of D175A mutant of Rv3272 from Mycobacterium tuberculosis==
 
<StructureSection load='5yiy' size='340' side='right'caption='[[5yiy]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
Authors: Karade, S.S., Pratap, J.V.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5yiy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YIY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YIY FirstGlance]. <br>
Description: Crystal structure of D175A mutant of Rv3272 from Mycobacterium tuberculosis
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.504&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
[[Category: Pratap, J.V]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yiy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yiy OCA], [https://pdbe.org/5yiy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yiy RCSB], [https://www.ebi.ac.uk/pdbsum/5yiy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yiy ProSAT]</span></td></tr>
[[Category: Karade, S.S]]
</table>
== Function ==
[https://www.uniprot.org/uniprot/COATR_MYCTU COATR_MYCTU] Probably involved in fatty acid metabolism. Binds to fatty acyl-CoAs of varying carbon chain lengths, with the highest binding affinity for palmitoyl-CoA (C16:0). In vitro, alters the cell wall lipid profile and protects mycobacteria from acidic, oxidative and antibiotic stress. May play a significant role in host-pathogen interaction.<ref>PMID:30342240</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Mycobacterium tuberculosis H37Rv]]
[[Category: Karade SS]]
[[Category: Pratap JV]]

Latest revision as of 13:23, 27 March 2024

Crystal structure of D175A mutant of Rv3272 from Mycobacterium tuberculosisCrystal structure of D175A mutant of Rv3272 from Mycobacterium tuberculosis

Structural highlights

5yiy is a 2 chain structure with sequence from Mycobacterium tuberculosis H37Rv. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.504Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

COATR_MYCTU Probably involved in fatty acid metabolism. Binds to fatty acyl-CoAs of varying carbon chain lengths, with the highest binding affinity for palmitoyl-CoA (C16:0). In vitro, alters the cell wall lipid profile and protects mycobacteria from acidic, oxidative and antibiotic stress. May play a significant role in host-pathogen interaction.[1]

References

  1. ↑ Karade SS, Pandey S, Ansari A, Das S, Tripathi S, Arora A, Chopra S, Pratap JV, Dasgupta A. Rv3272 encodes a novel Family III CoA transferase that alters the cell wall lipid profile and protects mycobacteria from acidic and oxidative stress. Biochim Biophys Acta Proteins Proteom. 2018 Oct 17. pii: S1570-9639(18)30180-8., doi: 10.1016/j.bbapap.2018.10.011. PMID:30342240 doi:http://dx.doi.org/10.1016/j.bbapap.2018.10.011

5yiy, resolution 2.50Å

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