2zni: Difference between revisions

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[[Image:2zni.png|left|200px]]


{{STRUCTURE_2zni|  PDB=2zni  |  SCENE=  }}
==Crystal structure of Pyrrolysyl-tRNA synthetase-tRNA(Pyl) complex from Desulfitobacterium hafniense==
 
<StructureSection load='2zni' size='340' side='right'caption='[[2zni]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
===Crystal structure of Pyrrolysyl-tRNA synthetase-tRNA(Pyl) complex from Desulfitobacterium hafniense===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2zni]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfitobacterium_hafniense Desulfitobacterium hafniense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZNI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZNI FirstGlance]. <br>
{{ABSTRACT_PUBMED_19118381}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zni FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zni OCA], [https://pdbe.org/2zni PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zni RCSB], [https://www.ebi.ac.uk/pdbsum/2zni PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zni ProSAT]</span></td></tr>
[[2zni]] is a 4 chain structure of [[Aminoacyl tRNA Synthetase]] and [[Pyrrolysyl-tRNA synthetase]] with sequence from [http://en.wikipedia.org/wiki/Desulfitobacterium_hafniense Desulfitobacterium hafniense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZNI OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/B0S4P3_DESHA B0S4P3_DESHA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zn/2zni_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zni ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Aminoacyl tRNA Synthetase|Aminoacyl tRNA Synthetase]]
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
*[[Pyrrolysyl-tRNA synthetase|Pyrrolysyl-tRNA synthetase]]
*[[Transfer RNA (tRNA)|Transfer RNA (tRNA)]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:019118381</ref><references group="xtra"/>
[[Category: Desulfitobacterium hafniense]]
[[Category: Desulfitobacterium hafniense]]
[[Category: Araiso, Y.]]
[[Category: Large Structures]]
[[Category: Ishitani, R.]]
[[Category: Araiso Y]]
[[Category: Nozawa, K.]]
[[Category: Ishitani R]]
[[Category: Nureki, O.]]
[[Category: Nozawa K]]
[[Category: Soll, D.]]
[[Category: Nureki O]]
[[Category: Ligase-rna complex]]
[[Category: Soll D]]

Latest revision as of 16:58, 13 March 2024

Crystal structure of Pyrrolysyl-tRNA synthetase-tRNA(Pyl) complex from Desulfitobacterium hafnienseCrystal structure of Pyrrolysyl-tRNA synthetase-tRNA(Pyl) complex from Desulfitobacterium hafniense

Structural highlights

2zni is a 4 chain structure with sequence from Desulfitobacterium hafniense. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.1Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

B0S4P3_DESHA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2zni, resolution 3.10Å

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OCA